RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 MTHFSP49914 203 aa12.75□□□□□ -0.37
PCDH15-228ENST00000615043 ABCA3Q99758 1704 aa12.74□□□□□ -0.37
PCDH15-228ENST00000615043 PEAK1Q9H792 1746 aa12.74□□□□□ -0.37
PCDH15-228ENST00000615043 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
PCDH15-228ENST00000615043 PPM1GO15355 546 aaPredicted RBP12.74□□□□□ -0.37
PCDH15-228ENST00000615043 RRS1Q15050 365 aaKnown RBP12.74□□□□□ -0.37
PCDH15-228ENST00000615043 TRAF7Q6Q0C0 670 aa12.74□□□□□ -0.37
PCDH15-228ENST00000615043 ANKMY2Q8IV38 441 aa12.74□□□□□ -0.37
PCDH15-228ENST00000615043 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
PCDH15-228ENST00000615043 SLC6A16Q9GZN6 736 aa12.74□□□□□ -0.37
PCDH15-228ENST00000615043 EMILIN1Q9Y6C2 1016 aa12.74□□□□□ -0.37
PCDH15-228ENST00000615043 COL3A1P02461 1466 aaPredicted RBP12.73□□□□□ -0.37
PCDH15-228ENST00000615043 TSGA10IPQ3SY00 556 aa12.73□□□□□ -0.37
PCDH15-228ENST00000615043 KCNH5Q8NCM2 988 aa12.73□□□□□ -0.37
PCDH15-228ENST00000615043 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
PCDH15-228ENST00000615043 POLKQ9UBT6 870 aa12.73□□□□□ -0.37
PCDH15-228ENST00000615043 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
PCDH15-228ENST00000615043 MAGEB6P1A0A0J9YX57 407 aa12.72□□□□□ -0.37
PCDH15-228ENST00000615043 PHLDB3Q6NSJ2 640 aa12.72□□□□□ -0.37
PCDH15-228ENST00000615043 OGFOD1Q8N543 542 aa12.72□□□□□ -0.37
PCDH15-228ENST00000615043 MAP3K19Q56UN5 1328 aa12.71□□□□□ -0.37
PCDH15-228ENST00000615043 COL22A1Q8NFW1 1626 aaPredicted RBP12.71□□□□□ -0.37
PCDH15-228ENST00000615043 SSFA2P28290 1259 aa12.71□□□□□ -0.37
PCDH15-228ENST00000615043 SH3RF1Q7Z6J0 888 aa12.71□□□□□ -0.37
PCDH15-228ENST00000615043 TRIM50Q86XT4 487 aa12.71□□□□□ -0.37
PCDH15-228ENST00000615043 LRRC59Q96AG4 307 aaKnown RBP12.71□□□□□ -0.37
PCDH15-228ENST00000615043 IL21Q9HBE4 155 aa12.71□□□□□ -0.37
PCDH15-228ENST00000615043 FLT4P35916 1363 aa12.7□□□□□ -0.38
PCDH15-228ENST00000615043 GCP02774 474 aa12.7□□□□□ -0.38
PCDH15-228ENST00000615043 DPYDQ12882 1025 aa12.7□□□□□ -0.38
PCDH15-228ENST00000615043 FAM9BQ8IZU0 186 aa12.7□□□□□ -0.38
PCDH15-228ENST00000615043 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
PCDH15-228ENST00000615043 BAP1Q92560 729 aa12.7□□□□□ -0.38
PCDH15-228ENST00000615043 ZNF516Q92618 1163 aa12.7□□□□□ -0.38
PCDH15-228ENST00000615043 CLP1Q92989 425 aaKnown RBP12.7□□□□□ -0.38
PCDH15-228ENST00000615043 DOLKQ9UPQ8 538 aa12.7□□□□□ -0.38
PCDH15-228ENST00000615043 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
PCDH15-228ENST00000615043 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 AMPHP49418 695 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 CLDN10P78369 228 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDH15-228ENST00000615043 AGERQ15109 404 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 TJAP1Q5JTD0 557 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 BPHLQ86WA6 291 aaPredicted RBP12.69□□□□□ -0.38
PCDH15-228ENST00000615043 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
PCDH15-228ENST00000615043 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
PCDH15-228ENST00000615043 KRTAP3-3Q9BYR6 98 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 KRTAP3-2Q9BYR7 98 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 DNAAF2Q9NVR5 837 aaKnown RBP12.69□□□□□ -0.38
PCDH15-228ENST00000615043 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
PCDH15-228ENST00000615043 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
PCDH15-228ENST00000615043 LINC01559Q495D7 138 aa12.68□□□□□ -0.38
PCDH15-228ENST00000615043 INSRP06213 1382 aa12.68□□□□□ -0.38
PCDH15-228ENST00000615043 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
PCDH15-228ENST00000615043 ARID4AP29374 1257 aaPredicted RBP12.67□□□□□ -0.38
PCDH15-228ENST00000615043 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
PCDH15-228ENST00000615043 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
PCDH15-228ENST00000615043 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
PCDH15-228ENST00000615043 OXLD1Q5BKU9 147 aa12.67□□□□□ -0.38
PCDH15-228ENST00000615043 FOXJ1Q92949 421 aa12.67□□□□□ -0.38
PCDH15-228ENST00000615043 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
PCDH15-228ENST00000615043 POTEMA6NI47 508 aa12.66□□□□□ -0.38
PCDH15-228ENST00000615043 HOXC9P31274 260 aa12.66□□□□□ -0.38
PCDH15-228ENST00000615043 PTPN5P54829 565 aa12.66□□□□□ -0.38
PCDH15-228ENST00000615043 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
PCDH15-228ENST00000615043 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
PCDH15-228ENST00000615043 ZNF428Q96B54 188 aa12.66□□□□□ -0.38
PCDH15-228ENST00000615043 KIAA0232Q92628 1395 aa12.66□□□□□ -0.38
PCDH15-228ENST00000615043 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
PCDH15-228ENST00000615043 ATP2B4P23634 1241 aa12.65□□□□□ -0.38
PCDH15-228ENST00000615043 SWI5Q1ZZU3 235 aa12.65□□□□□ -0.38
PCDH15-228ENST00000615043 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
PCDH15-228ENST00000615043 LARGE2Q8N3Y3 721 aa12.65□□□□□ -0.38
PCDH15-228ENST00000615043 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
PCDH15-228ENST00000615043 NUDCQ9Y266 331 aa12.65□□□□□ -0.38
PCDH15-228ENST00000615043 ABCC6O95255 1503 aa12.65□□□□□ -0.38
PCDH15-228ENST00000615043 CPDO75976 1380 aa12.65□□□□□ -0.38
PCDH15-228ENST00000615043 COL18A1P39060 1754 aa12.64□□□□□ -0.39
PCDH15-228ENST00000615043 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
PCDH15-228ENST00000615043 C4orf48Q5BLP8 95 aa12.64□□□□□ -0.39
PCDH15-228ENST00000615043 IP6K1Q92551 441 aa12.64□□□□□ -0.39
PCDH15-228ENST00000615043 SLC10A4Q96EP9 437 aa12.64□□□□□ -0.39
PCDH15-228ENST00000615043 ADAMTS8Q9UP79 889 aa12.64□□□□□ -0.39
PCDH15-228ENST00000615043 FCF1Q9Y324 198 aaKnown RBP12.64□□□□□ -0.39
PCDH15-228ENST00000615043 JCADQ9P266 1359 aa12.64□□□□□ -0.39
PCDH15-228ENST00000615043 RGPD5Q99666 1765 aa12.64□□□□□ -0.39
PCDH15-228ENST00000615043 BLMP54132 1417 aaPredicted RBP12.63□□□□□ -0.39
PCDH15-228ENST00000615043 RGPD1P0DJD0 1748 aa12.63□□□□□ -0.39
PCDH15-228ENST00000615043 ZBTB7BO15156 539 aaPredicted RBP12.63□□□□□ -0.39
PCDH15-228ENST00000615043 S1PR4O95977 384 aa12.63□□□□□ -0.39
PCDH15-228ENST00000615043 U2AF1L5P0DN76 240 aaPredicted RBP12.63□□□□□ -0.39
PCDH15-228ENST00000615043 HSPA1LP34931 641 aa12.63□□□□□ -0.39
PCDH15-228ENST00000615043 IL13P35225 146 aa12.63□□□□□ -0.39
PCDH15-228ENST00000615043 GTF2IP78347 998 aa12.63□□□□□ -0.39
PCDH15-228ENST00000615043 U2AF1Q01081 240 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCDH15-228ENST00000615043 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
PCDH15-228ENST00000615043 KIAA1024Q9UPX6 916 aa12.63□□□□□ -0.39
PCDH15-228ENST00000615043 LMO7Q8WWI1 1683 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms