RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CFAP100Q494V2 611 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 PLEKHM2Q8IWE5 1019 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 CHD1O14646 1710 aa17.04■□□□□ 0.32
SNPH-203ENST00000614659 GOLGA8BA8MQT2 603 aa17.04■□□□□ 0.32
SNPH-203ENST00000614659 MTHFSDQ2M296 383 aaKnown RBP17.04■□□□□ 0.32
SNPH-203ENST00000614659 DZIP3Q86Y13 1208 aaKnown RBP17.04■□□□□ 0.32
SNPH-203ENST00000614659 KIF18AQ8NI77 898 aa17.04■□□□□ 0.32
SNPH-203ENST00000614659 ANKRD2Q9GZV1 360 aa17.04■□□□□ 0.32
SNPH-203ENST00000614659 CHPF2Q9P2E5 772 aa17.04■□□□□ 0.32
SNPH-203ENST00000614659 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
SNPH-203ENST00000614659 NIP7Q9Y221 180 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNPH-203ENST00000614659 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
SNPH-203ENST00000614659 GRM8O00222 908 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 EPB41L2O43491 1005 aaKnown RBP17.03■□□□□ 0.32
SNPH-203ENST00000614659 AXDND1Q5T1B0 1012 aaPredicted RBP17.03■□□□□ 0.32
SNPH-203ENST00000614659 TTLL5Q6EMB2 1281 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 TSPYL1Q9H0U9 437 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 DEF6Q9H4E7 631 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 PLEKHG1Q9ULL1 1385 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 FSIP1Q8NA03 581 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 GOLGA6L9A6NEM1 432 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 GOLGA8AA7E2F4 631 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 ERLIN2O94905 339 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 CLCN1P35523 988 aa17.03■□□□□ 0.32
SNPH-203ENST00000614659 RBM17Q96I25 401 aaKnown RBP17.03■□□□□ 0.32
SNPH-203ENST00000614659 IL13P35225 146 aa17.02■□□□□ 0.32
SNPH-203ENST00000614659 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.32
SNPH-203ENST00000614659 SHROOM2Q13796 1616 aa17.02■□□□□ 0.32
SNPH-203ENST00000614659 LINS1Q8NG48 757 aa17.02■□□□□ 0.32
SNPH-203ENST00000614659 CTCFLQ8NI51 663 aaPredicted RBP17.02■□□□□ 0.32
SNPH-203ENST00000614659 USP25Q9UHP3 1055 aa17.02■□□□□ 0.32
SNPH-203ENST00000614659 ZNF397Q8NF99 534 aaPredicted RBP17.02■□□□□ 0.31
SNPH-203ENST00000614659 CGNQ9P2M7 1197 aaKnown RBP17.02■□□□□ 0.31
SNPH-203ENST00000614659 ADCY5O95622 1261 aa17.02■□□□□ 0.31
SNPH-203ENST00000614659 PDE4BQ07343 736 aa17.02■□□□□ 0.31
SNPH-203ENST00000614659 PARP10Q53GL7 1025 aa17.02■□□□□ 0.31
SNPH-203ENST00000614659 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.31
SNPH-203ENST00000614659 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 CCDC150Q8NCX0 1101 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
SNPH-203ENST00000614659 YEATS2Q9ULM3 1422 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 LMOD1P29536 600 aaPredicted RBP17.01■□□□□ 0.31
SNPH-203ENST00000614659 PPP4R3AQ6IN85 833 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 CRNKL1Q9BZJ0 848 aaKnown RBP17.01■□□□□ 0.31
SNPH-203ENST00000614659 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 SYCP1Q15431 976 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 CCDC181Q5TID7 509 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 CCDC148Q8NFR7 591 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 UBXN4Q92575 508 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 GOLIM4O00461 696 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 UBE3BQ7Z3V4 1068 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 USP26Q9BXU7 913 aa17.01■□□□□ 0.31
SNPH-203ENST00000614659 KDM6BO15054 1643 aa17■□□□□ 0.31
SNPH-203ENST00000614659 TOP1P11387 765 aaKnown RBP17■□□□□ 0.31
SNPH-203ENST00000614659 MCM3P25205 808 aa17■□□□□ 0.31
SNPH-203ENST00000614659 IL15P40933 162 aaPredicted RBP17■□□□□ 0.31
SNPH-203ENST00000614659 FEZ1Q99689 392 aa17■□□□□ 0.31
SNPH-203ENST00000614659 KIAA0232Q92628 1395 aa17■□□□□ 0.31
SNPH-203ENST00000614659 F13A1P00488 732 aa17■□□□□ 0.31
SNPH-203ENST00000614659 RBM8AQ9Y5S9 174 aaKnown RBP17■□□□□ 0.31
SNPH-203ENST00000614659 MCMDC2Q4G0Z9 681 aa17■□□□□ 0.31
SNPH-203ENST00000614659 TSPYL6Q8N831 410 aa17■□□□□ 0.31
SNPH-203ENST00000614659 CCDC12Q8WUD4 166 aaPredicted RBP17■□□□□ 0.31
SNPH-203ENST00000614659 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
SNPH-203ENST00000614659 KIAA0754O94854 1291 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 FGFR1OPO95684 399 aaKnown RBP16.99■□□□□ 0.31
SNPH-203ENST00000614659 ARHGAP29Q52LW3 1261 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 XAGE3Q8WTP9 111 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 DYNC1I1O14576 645 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 BMP15O95972 392 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 PHACTR3Q96KR7 559 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 USP16Q9Y5T5 823 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 IFIT3O14879 490 aaKnown RBP16.99■□□□□ 0.31
SNPH-203ENST00000614659 TUBB4AP04350 444 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 PLCG2P16885 1265 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 UBE2Q2Q8WVN8 375 aa16.99■□□□□ 0.31
SNPH-203ENST00000614659 KCNG4Q8TDN1 519 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 XRCC6P12956 609 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNPH-203ENST00000614659 IARSP41252 1262 aaKnown RBP16.98■□□□□ 0.31
SNPH-203ENST00000614659 CCDC96Q2M329 555 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
SNPH-203ENST00000614659 CCDC171Q6TFL3 1326 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 POTEB2H3BUK9 544 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 USP8P40818 1118 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 STK11IPQ8N1F8 1099 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 PAXBP1Q9Y5B6 917 aa16.98■□□□□ 0.31
SNPH-203ENST00000614659 PLEKHG3A1L390 1219 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms