RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	TCP11L2	Q8N4U5	519 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	CNNM3	Q8NE01	707 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	TBC1D31	Q96DN5	1066 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	SH2D4A	Q9H788	454 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	CABP1	Q9NZU7	370 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	NOL3	O60936	208 aa	Known RBP	13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293		M0QZ92	97 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	SFPQ	P23246	707 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	KIF22	Q14807	665 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	CDAN1	Q8IWY9	1227 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	UBXN4	Q92575	508 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	SPC25	Q9HBM1	224 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	GNAQ	P50148	359 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	WDR63	Q8IWG1	891 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	VAT1L	Q9HCJ6	419 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	ZBTB16	Q05516	673 aa		13.9	□□□□□ -0.18
ABCA2-223	ENST00000614293	PDE3A	Q14432	1141 aa		13.9	□□□□□ -0.19
ABCA2-223	ENST00000614293	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	C1orf115	Q9H7X2	142 aa		13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	CWC25	Q9NXE8	425 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	POLA1	P09884	1462 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	IRX3	P78415	501 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	CADPS2	Q86UW7	1296 aa		13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	EYA3	Q99504	573 aa		13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	ERBIN	Q96RT1	1412 aa		13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	CGN	Q9P2M7	1197 aa	Known RBP	13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293	IVNS1ABP	Q9Y6Y0	642 aa		13.89	□□□□□ -0.19
ABCA2-223	ENST00000614293		K7ELQ4	463 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	CCDC63	Q8NA47	563 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	SLC5A4	Q9NY91	659 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	GOLGA8A	A7E2F4	631 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	GOLGA8B	A8MQT2	603 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	TAF7	Q15545	349 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	IQGAP2	Q13576	1575 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	GIPC1	O14908	333 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	MXRA7	P84157	204 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	RSPH3	Q86UC2	560 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	TCIRG1	Q13488	830 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	NSRP1	Q9H0G5	558 aa	Known RBP	13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	VEZT	Q9HBM0	779 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	FAM13A	O94988	1023 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	BMP15	O95972	392 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	KIF4B	Q2VIQ3	1234 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	RNF187	Q5TA31	235 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	GSTA5	Q7RTV2	222 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	SMARCC2	Q8TAQ2	1214 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	SIRT1	Q96EB6	747 aa		13.88	□□□□□ -0.19
ABCA2-223	ENST00000614293	GOLGA6L9	A6NEM1	432 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	TMEM67	Q5HYA8	995 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	CCDC77	Q9BR77	488 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	TRIM6	Q9C030	488 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	FAM169A	Q9Y6X4	670 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	NSMCE1	Q8WV22	266 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	FAM212A	Q96EL1	285 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	ARID4A	P29374	1257 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	EXOSC9	Q06265	439 aa	Known RBP	13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	CCDC6	Q16204	474 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	TMTC2	Q8N394	836 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	C9orf84	Q5VXU9	1444 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	PFDN4	Q9NQP4	134 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	CCDC141	Q6ZP82	1450 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	GABPA	Q06546	454 aa		13.87	□□□□□ -0.19
ABCA2-223	ENST00000614293	CEP128	Q6ZU80	1094 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	AFAP1L2	Q8N4X5	818 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	UQCRFS1P1	P0C7P4	283 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	ALDH3A1	P30838	453 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	ERCC6L	Q2NKX8	1250 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	DPH6	Q7L8W6	267 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	KRT23	Q9C075	422 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	SMC6	Q96SB8	1091 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	NAP1L3	Q99457	506 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	THOC2	Q8NI27	1593 aa	Known RBP	13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	ARID5A	Q03989	594 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	CCDC61	Q9Y6R9	512 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	BCAR3	O75815	825 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	STK10	O94804	968 aa	Known RBP	13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	IDE	P14735	1019 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	CALML3	P27482	149 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	CCDC125	Q86Z20	511 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	CD2AP	Q9Y5K6	639 aa		13.86	□□□□□ -0.19
ABCA2-223	ENST00000614293	NR1I2	O75469	434 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	DNAAF4	Q8WXU2	420 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	NLRP3	Q96P20	1036 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	PRG4	Q92954	1404 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	FCHSD2	O94868	740 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	CALM1	P0DP23	149 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	CALM2	P0DP24	149 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	CALM3	P0DP25	149 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	MUM1L1	Q5H9M0	696 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	IFIT1B	Q5T764	474 aa	Known RBP	13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	MMRN2	Q9H8L6	949 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	FBF1	Q8TES7	1133 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	RBM25	P49756	843 aa	Known RBP	13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	EIF6	P56537	245 aa	Known RBP	13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	GEN1	Q17RS7	908 aa		13.85	□□□□□ -0.19
ABCA2-223	ENST00000614293	CHD1L	Q86WJ1	897 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms