RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 RTFDC1Q9BY42 306 aaPredicted RBP22.74■■□□□ 1.23
CSNK1E-215ENST00000612795 AKAP11Q9UKA4 1901 aa22.74■■□□□ 1.23
CSNK1E-215ENST00000612795 POLR2AP24928 1970 aaKnown RBP22.74■■□□□ 1.23
CSNK1E-215ENST00000612795 RAD17O75943 681 aa22.73■■□□□ 1.23
CSNK1E-215ENST00000612795 TNIP1Q15025 636 aa22.73■■□□□ 1.23
CSNK1E-215ENST00000612795 CDC37L1Q7L3B6 337 aa22.73■■□□□ 1.23
CSNK1E-215ENST00000612795 PGAP2Q9UHJ9 254 aa22.73■■□□□ 1.23
CSNK1E-215ENST00000612795 LRRC37AA6NMS7 1700 aa22.73■■□□□ 1.23
CSNK1E-215ENST00000612795 KIAA2012Q0VF49 1180 aa22.72■■□□□ 1.23
CSNK1E-215ENST00000612795 NOGQ13253 232 aa22.72■■□□□ 1.23
CSNK1E-215ENST00000612795 MPNDQ8N594 471 aa22.72■■□□□ 1.23
CSNK1E-215ENST00000612795 TRPM4Q8TD43 1214 aa22.72■■□□□ 1.23
CSNK1E-215ENST00000612795 THUMPD2Q9BTF0 503 aaKnown RBP22.72■■□□□ 1.23
CSNK1E-215ENST00000612795 DDX60Q8IY21 1712 aaKnown RBP22.71■■□□□ 1.23
CSNK1E-215ENST00000612795 SP8Q8IXZ3 490 aa22.71■■□□□ 1.23
CSNK1E-215ENST00000612795 BBOX1O75936 387 aa22.7■■□□□ 1.22
CSNK1E-215ENST00000612795 HIRAP54198 1017 aaPredicted RBP22.7■■□□□ 1.22
CSNK1E-215ENST00000612795 SLC10A5Q5PT55 438 aa22.7■■□□□ 1.22
CSNK1E-215ENST00000612795 DUOX1Q9NRD9 1551 aa22.7■■□□□ 1.22
CSNK1E-215ENST00000612795 PDE4DIPQ5VU43 2346 aa22.7■■□□□ 1.22
CSNK1E-215ENST00000612795 H7C1D1 291 aa22.69■■□□□ 1.22
CSNK1E-215ENST00000612795 HUNKP57058 714 aa22.69■■□□□ 1.22
CSNK1E-215ENST00000612795 DDX46Q7L014 1031 aaKnown RBP22.69■■□□□ 1.22
CSNK1E-215ENST00000612795 CNOT7Q9UIV1 285 aaKnown RBP22.69■■□□□ 1.22
CSNK1E-215ENST00000612795 NFE2L2Q16236 605 aa22.68■■□□□ 1.22
CSNK1E-215ENST00000612795 MICALL2Q8IY33 904 aa22.68■■□□□ 1.22
CSNK1E-215ENST00000612795 PCDH10Q9P2E7 1040 aa22.68■■□□□ 1.22
CSNK1E-215ENST00000612795 MAPK8IP3Q9UPT6 1336 aa22.67■■□□□ 1.22
CSNK1E-215ENST00000612795 SHTN1A0MZ66 631 aa22.67■■□□□ 1.22
CSNK1E-215ENST00000612795 EIF2S2P20042 333 aaKnown RBP22.67■■□□□ 1.22
CSNK1E-215ENST00000612795 USP48Q86UV5 1035 aa22.67■■□□□ 1.22
CSNK1E-215ENST00000612795 TSPYL4Q9UJ04 414 aa22.67■■□□□ 1.22
CSNK1E-215ENST00000612795 HCLS1P14317 486 aaPredicted RBP22.66■■□□□ 1.22
CSNK1E-215ENST00000612795 HSP90AB3PQ58FF7 597 aa22.66■■□□□ 1.22
CSNK1E-215ENST00000612795 YDJCA8MPS7 323 aa22.65■■□□□ 1.22
CSNK1E-215ENST00000612795 GRAPQ13588 217 aa22.65■■□□□ 1.22
CSNK1E-215ENST00000612795 GRAPLQ8TC17 118 aaPredicted RBP22.65■■□□□ 1.22
CSNK1E-215ENST00000612795 ZIC5Q96T25 663 aa22.65■■□□□ 1.22
CSNK1E-215ENST00000612795 ANXA1P04083 346 aa22.64■■□□□ 1.21
CSNK1E-215ENST00000612795 LRP10Q7Z4F1 713 aa22.64■■□□□ 1.21
CSNK1E-215ENST00000612795 TRMT112Q9UI30 125 aaKnown RBP22.64■■□□□ 1.21
CSNK1E-215ENST00000612795 PROSER3Q2NL68 480 aa22.63■■□□□ 1.21
CSNK1E-215ENST00000612795 RGMBQ6NW40 437 aa22.63■■□□□ 1.21
CSNK1E-215ENST00000612795 TMC4Q7Z404 712 aa22.63■■□□□ 1.21
CSNK1E-215ENST00000612795 NLRP10Q86W26 655 aa22.63■■□□□ 1.21
CSNK1E-215ENST00000612795 PLEKHF1Q96S99 279 aa22.63■■□□□ 1.21
CSNK1E-215ENST00000612795 ZBTB12Q9Y330 459 aaPredicted RBP22.63■■□□□ 1.21
CSNK1E-215ENST00000612795 TNRC18O15417 2968 aaPredicted RBP22.63■■□□□ 1.21
CSNK1E-215ENST00000612795 SH3TC1Q8TE82 1336 aa22.62■■□□□ 1.21
CSNK1E-215ENST00000612795 AIMP1Q12904 312 aaKnown RBP22.62■■□□□ 1.21
CSNK1E-215ENST00000612795 PDIA6Q15084 440 aa22.62■■□□□ 1.21
CSNK1E-215ENST00000612795 SAMD7Q7Z3H4 446 aa22.62■■□□□ 1.21
CSNK1E-215ENST00000612795 KRT26Q7Z3Y9 468 aa22.62■■□□□ 1.21
CSNK1E-215ENST00000612795 GBA2Q9HCG7 927 aaPredicted RBP22.62■■□□□ 1.21
CSNK1E-215ENST00000612795 TBC1D10BQ4KMP7 808 aaPredicted RBP22.61■■□□□ 1.21
CSNK1E-215ENST00000612795 DLK2Q6UY11 383 aa22.61■■□□□ 1.21
CSNK1E-215ENST00000612795 C2orf69Q8N8R5 385 aa22.61■■□□□ 1.21
CSNK1E-215ENST00000612795 DPF2Q92785 391 aa22.61■■□□□ 1.21
CSNK1E-215ENST00000612795 PNNQ9H307 717 aaKnown RBP22.61■■□□□ 1.21
CSNK1E-215ENST00000612795 SAGE1Q9NXZ1 904 aa22.61■■□□□ 1.21
CSNK1E-215ENST00000612795 PSMD14O00487 310 aa22.6■■□□□ 1.21
CSNK1E-215ENST00000612795 COPS6Q7L5N1 327 aa22.6■■□□□ 1.21
CSNK1E-215ENST00000612795 DCPSQ96C86 337 aaKnown RBP22.6■■□□□ 1.21
CSNK1E-215ENST00000612795 DBNDD1Q9H9R9 158 aa22.6■■□□□ 1.21
CSNK1E-215ENST00000612795 SOX10P56693 466 aa22.59■■□□□ 1.21
CSNK1E-215ENST00000612795 WASHC4Q2M389 1173 aa22.59■■□□□ 1.21
CSNK1E-215ENST00000612795 XAGE3Q8WTP9 111 aa22.59■■□□□ 1.21
CSNK1E-215ENST00000612795 NECTIN2Q92692 538 aa22.59■■□□□ 1.21
CSNK1E-215ENST00000612795 CCDC102AQ96A19 550 aa22.59■■□□□ 1.21
CSNK1E-215ENST00000612795 FAM155AB1AL88 458 aaPredicted RBP22.58■■□□□ 1.21
CSNK1E-215ENST00000612795 ADM5C9JUS6 153 aa22.58■■□□□ 1.21
CSNK1E-215ENST00000612795 ZNF157P51786 506 aaPredicted RBP22.58■■□□□ 1.21
CSNK1E-215ENST00000612795 TCIRG1Q13488 830 aa22.58■■□□□ 1.21
CSNK1E-215ENST00000612795 NSFL1CQ9UNZ2 370 aaKnown RBP22.58■■□□□ 1.21
CSNK1E-215ENST00000612795 SCN9AQ15858 1988 aa22.58■■□□□ 1.2
CSNK1E-215ENST00000612795 RIMBP2O15034 1052 aa22.57■■□□□ 1.2
CSNK1E-215ENST00000612795 KIF23Q02241 960 aaPredicted RBP22.57■■□□□ 1.2
CSNK1E-215ENST00000612795 RBM26Q5T8P6 1007 aaKnown RBP22.57■■□□□ 1.2
CSNK1E-215ENST00000612795 C6orf229H3BNL8 230 aa22.56■■□□□ 1.2
CSNK1E-215ENST00000612795 TRPA1O75762 1119 aa22.56■■□□□ 1.2
CSNK1E-215ENST00000612795 EGFRP00533 1210 aa22.56■■□□□ 1.2
CSNK1E-215ENST00000612795 RPS12P25398 132 aaKnown RBP22.56■■□□□ 1.2
CSNK1E-215ENST00000612795 ZNF428Q96B54 188 aa22.56■■□□□ 1.2
CSNK1E-215ENST00000612795 PSME4Q14997 1843 aa22.55■■□□□ 1.2
CSNK1E-215ENST00000612795 ECE2O60344 883 aa22.55■■□□□ 1.2
CSNK1E-215ENST00000612795 RNF186Q9NXI6 227 aa22.55■■□□□ 1.2
CSNK1E-215ENST00000612795 KIF4BQ2VIQ3 1234 aa22.54■■□□□ 1.2
CSNK1E-215ENST00000612795 SULF1Q8IWU6 871 aa22.54■■□□□ 1.2
CSNK1E-215ENST00000612795 EYA3Q99504 573 aa22.54■■□□□ 1.2
CSNK1E-215ENST00000612795 COL4A1P02462 1669 aa22.53■■□□□ 1.2
CSNK1E-215ENST00000612795 RIPK4P57078 832 aa22.53■■□□□ 1.2
CSNK1E-215ENST00000612795 CELF1Q92879 486 aaKnown RBP22.53■■□□□ 1.2
CSNK1E-215ENST00000612795 BABAM1Q9NWV8 329 aa22.53■■□□□ 1.2
CSNK1E-215ENST00000612795 GGA3Q9NZ52 723 aa22.53■■□□□ 1.2
CSNK1E-215ENST00000612795 RTL9Q8NET4 1388 aa22.52■■□□□ 1.2
CSNK1E-215ENST00000612795 SLC10A3P09131 477 aa22.52■■□□□ 1.2
CSNK1E-215ENST00000612795 DOK7Q18PE1 504 aa22.52■■□□□ 1.2
CSNK1E-215ENST00000612795 PAPPA2Q9BXP8 1791 aa22.51■■□□□ 1.19
CSNK1E-215ENST00000612795 GPSM2P81274 684 aa22.51■■□□□ 1.19
CSNK1E-215ENST00000612795 LMOD3Q0VAK6 560 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms