RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 CAMSAP1Q5T5Y3 1602 aa15.4■□□□□ 0.06
TCF3-220ENST00000611869 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
TCF3-220ENST00000611869 CEP57L1Q8IYX8 460 aa15.4■□□□□ 0.06
TCF3-220ENST00000611869 F13A1P00488 732 aa15.4■□□□□ 0.06
TCF3-220ENST00000611869 PHKG2P15735 406 aa15.4■□□□□ 0.06
TCF3-220ENST00000611869 ORC3Q9UBD5 711 aaPredicted RBP15.4■□□□□ 0.06
TCF3-220ENST00000611869 POLR3DP05423 398 aaPredicted RBP15.39■□□□□ 0.05
TCF3-220ENST00000611869 DDB1Q16531 1140 aa15.39■□□□□ 0.05
TCF3-220ENST00000611869 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
TCF3-220ENST00000611869 EDC3Q96F86 508 aaKnown RBP15.39■□□□□ 0.05
TCF3-220ENST00000611869 INTS4Q96HW7 963 aaKnown RBP15.39■□□□□ 0.05
TCF3-220ENST00000611869 ANO8Q9HCE9 1232 aaPredicted RBP15.39■□□□□ 0.05
TCF3-220ENST00000611869 SNX14Q9Y5W7 946 aa15.39■□□□□ 0.05
TCF3-220ENST00000611869 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
TCF3-220ENST00000611869 PRIM1P49642 420 aaKnown RBP15.39■□□□□ 0.05
TCF3-220ENST00000611869 DZIP3Q86Y13 1208 aaKnown RBP15.39■□□□□ 0.05
TCF3-220ENST00000611869 SLC9C2Q5TAH2 1124 aa15.39■□□□□ 0.05
TCF3-220ENST00000611869 PALD1Q9ULE6 856 aa15.39■□□□□ 0.05
TCF3-220ENST00000611869 ATP2B2Q01814 1243 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 PTPRMP28827 1452 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 NEURL1BA8MQ27 555 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 RANBP6O60518 1105 aaKnown RBP15.38■□□□□ 0.05
TCF3-220ENST00000611869 SYT1P21579 422 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 TTF1Q15361 905 aaPredicted RBP15.38■□□□□ 0.05
TCF3-220ENST00000611869 LRSAM1Q6UWE0 723 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 NCOA7Q8NI08 942 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 SLC12A7Q9Y666 1083 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 KLF18A0A0U1RQI7 1052 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 SERPINC1P01008 464 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 SLAIN2Q9P270 581 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 AOX1Q06278 1338 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 RAD50Q92878 1312 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
TCF3-220ENST00000611869 CD2BP2O95400 341 aaKnown RBP15.37■□□□□ 0.05
TCF3-220ENST00000611869 RUFY3Q7L099 469 aa15.37■□□□□ 0.05
TCF3-220ENST00000611869 UNC5CLQ8IV45 518 aa15.37■□□□□ 0.05
TCF3-220ENST00000611869 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
TCF3-220ENST00000611869 IRS4O14654 1257 aaPredicted RBP15.37■□□□□ 0.05
TCF3-220ENST00000611869 TPM2P07951 284 aa15.37■□□□□ 0.05
TCF3-220ENST00000611869 ARHGEF40Q8TER5 1519 aa15.37■□□□□ 0.05
TCF3-220ENST00000611869 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
TCF3-220ENST00000611869 EAF2Q96CJ1 260 aaPredicted RBP15.37■□□□□ 0.05
TCF3-220ENST00000611869 A0A1B0GUL7 405 aa15.37■□□□□ 0.05
TCF3-220ENST00000611869 ZFYP08048 801 aaPredicted RBP15.37■□□□□ 0.05
TCF3-220ENST00000611869 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
TCF3-220ENST00000611869 FSIP1Q8NA03 581 aa15.37■□□□□ 0.05
TCF3-220ENST00000611869 CDC5LQ99459 802 aaKnown RBP15.37■□□□□ 0.05
TCF3-220ENST00000611869 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
TCF3-220ENST00000611869 EYA2O00167 538 aa15.36■□□□□ 0.05
TCF3-220ENST00000611869 MCM5P33992 734 aa15.36■□□□□ 0.05
TCF3-220ENST00000611869 RBM10P98175 930 aaKnown RBP15.36■□□□□ 0.05
TCF3-220ENST00000611869 ANKIB1Q9P2G1 1089 aa15.36■□□□□ 0.05
TCF3-220ENST00000611869 TMEM67Q5HYA8 995 aa15.36■□□□□ 0.05
TCF3-220ENST00000611869 LRRC7Q96NW7 1537 aa15.36■□□□□ 0.05
TCF3-220ENST00000611869 PTCH1Q13635 1447 aa15.35■□□□□ 0.05
TCF3-220ENST00000611869 IKQ13123 557 aaPredicted RBP15.35■□□□□ 0.05
TCF3-220ENST00000611869 RNF113AO15541 343 aaKnown RBP15.35■□□□□ 0.05
TCF3-220ENST00000611869 WASF1Q92558 559 aa15.35■□□□□ 0.05
TCF3-220ENST00000611869 UQCRFS1P1P0C7P4 283 aa15.35■□□□□ 0.05
TCF3-220ENST00000611869 DDX19AQ9NUU7 478 aaKnown RBP15.35■□□□□ 0.05
TCF3-220ENST00000611869 IQGAP1P46940 1657 aa15.35■□□□□ 0.05
TCF3-220ENST00000611869 HSPA4P34932 840 aa15.35■□□□□ 0.05
TCF3-220ENST00000611869 APOBRQ0VD83 1088 aa15.35■□□□□ 0.05
TCF3-220ENST00000611869 CCDC152Q4G0S7 254 aa15.35■□□□□ 0.05
TCF3-220ENST00000611869 IPO7O95373 1038 aaKnown RBP15.34■□□□□ 0.05
TCF3-220ENST00000611869 PKP1Q13835 747 aa15.34■□□□□ 0.05
TCF3-220ENST00000611869 SETD1BQ9UPS6 1966 aaKnown RBP15.34■□□□□ 0.05
TCF3-220ENST00000611869 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
TCF3-220ENST00000611869 SLC27A2O14975 620 aa15.34■□□□□ 0.05
TCF3-220ENST00000611869 IARSP41252 1262 aaKnown RBP15.34■□□□□ 0.05
TCF3-220ENST00000611869 METAP2P50579 478 aaKnown RBP eCLIP15.34■□□□□ 0.052e-7■■■■□ 21.4
TCF3-220ENST00000611869 AEBP2Q6ZN18 517 aaPredicted RBP15.34■□□□□ 0.05
TCF3-220ENST00000611869 TTLL7Q6ZT98 887 aa15.34■□□□□ 0.05
TCF3-220ENST00000611869 DZIP1Q86YF9 867 aaKnown RBP15.34■□□□□ 0.05
TCF3-220ENST00000611869 CCDC191Q8NCU4 936 aa15.34■□□□□ 0.05
TCF3-220ENST00000611869 TXLNAP40222 546 aa15.34■□□□□ 0.05
TCF3-220ENST00000611869 USP5P45974 858 aa15.33■□□□□ 0.05
TCF3-220ENST00000611869 SLC4A8Q2Y0W8 1093 aa15.33■□□□□ 0.05
TCF3-220ENST00000611869 ADCY5O95622 1261 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 FAM173BQ6P4H8 233 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 NOL7Q9UMY1 257 aaKnown RBP15.33■□□□□ 0.04
TCF3-220ENST00000611869 KDRP35968 1356 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 ERBB3P21860 1342 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 CPSF1Q10570 1443 aaKnown RBP15.33■□□□□ 0.04
TCF3-220ENST00000611869 CCDC196A0A1B0GTZ2 297 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 BIN1O00499 593 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 MFSD6Q6ZSS7 791 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 IQCA1Q86XH1 822 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 DACT1Q9NYF0 836 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 MED14O60244 1454 aa15.33■□□□□ 0.04
TCF3-220ENST00000611869 CCAR1Q8IX12 1150 aaKnown RBP15.32■□□□□ 0.04
TCF3-220ENST00000611869 RNF41Q9H4P4 317 aaPredicted RBP15.32■□□□□ 0.04
TCF3-220ENST00000611869 PRC1O43663 620 aa15.32■□□□□ 0.04
TCF3-220ENST00000611869 ZNF165P49910 485 aa15.32■□□□□ 0.04
TCF3-220ENST00000611869 DHX32Q7L7V1 743 aaKnown RBP15.32■□□□□ 0.04
TCF3-220ENST00000611869 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
TCF3-220ENST00000611869 NRXN1Q9ULB1 1477 aa15.32■□□□□ 0.04
TCF3-220ENST00000611869 ADGRB1O14514 1584 aa15.32■□□□□ 0.04
TCF3-220ENST00000611869 PTH1RQ03431 593 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms