RNA–Protein interactions for RNA: ENST00000611074.4

RAVER1-206, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RAVER1, Length 3,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-206ENST00000611074 NEK1Q96PY6 1258 aa16.35■□□□□ 0.21
RAVER1-206ENST00000611074 FTOQ9C0B1 505 aaKnown RBP eCLIP16.35■□□□□ 0.21
RAVER1-206ENST00000611074 CTNNA3Q9UI47 895 aa16.35■□□□□ 0.21
RAVER1-206ENST00000611074 CCT2P78371 535 aaKnown RBP16.35■□□□□ 0.21
RAVER1-206ENST00000611074 C11orf57Q6ZUT1 292 aaPredicted RBP16.35■□□□□ 0.21
RAVER1-206ENST00000611074 EID1Q9Y6B2 187 aa16.35■□□□□ 0.21
RAVER1-206ENST00000611074 SMC2O95347 1197 aa16.34■□□□□ 0.21
RAVER1-206ENST00000611074 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
RAVER1-206ENST00000611074 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
RAVER1-206ENST00000611074 LRRC8AQ8IWT6 810 aa16.34■□□□□ 0.21
RAVER1-206ENST00000611074 BICC1Q9H694 974 aaKnown RBP16.34■□□□□ 0.21
RAVER1-206ENST00000611074 STX1AQ16623 288 aa16.34■□□□□ 0.21
RAVER1-206ENST00000611074 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
RAVER1-206ENST00000611074 TOB2Q14106 344 aaPredicted RBP16.33■□□□□ 0.21
RAVER1-206ENST00000611074 CCDC129Q6ZRS4 1044 aa16.33■□□□□ 0.21
RAVER1-206ENST00000611074 KIF18AQ8NI77 898 aa16.33■□□□□ 0.21
RAVER1-206ENST00000611074 SUCLG2Q96I99 432 aa16.33■□□□□ 0.2
RAVER1-206ENST00000611074 KDRP35968 1356 aa16.33■□□□□ 0.2
RAVER1-206ENST00000611074 ELF2Q15723 593 aa16.33■□□□□ 0.2
RAVER1-206ENST00000611074 HOMER1Q86YM7 354 aa16.33■□□□□ 0.2
RAVER1-206ENST00000611074 USP31Q70CQ4 1352 aa16.33■□□□□ 0.2
RAVER1-206ENST00000611074 CEP57L1Q8IYX8 460 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 AOPEPQ8N6M6 819 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 FSIP1Q8NA03 581 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 CEP170BQ9Y4F5 1589 aaPredicted RBP16.32■□□□□ 0.2
RAVER1-206ENST00000611074 GRM8O00222 908 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 SASH1O94885 1247 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 KRT222Q8N1A0 295 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 NRDCO43847 1150 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
RAVER1-206ENST00000611074 MYL6BP14649 208 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 LTKP29376 864 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 KRT32Q14532 448 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 KSR2Q6VAB6 950 aa16.32■□□□□ 0.2
RAVER1-206ENST00000611074 ANO10Q9NW15 660 aa16.31■□□□□ 0.2
RAVER1-206ENST00000611074 BABAM1Q9NWV8 329 aa16.31■□□□□ 0.2
RAVER1-206ENST00000611074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.31■□□□□ 0.2
RAVER1-206ENST00000611074 HMG20BQ9P0W2 317 aa16.31■□□□□ 0.2
RAVER1-206ENST00000611074 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
RAVER1-206ENST00000611074 ZNF397Q8NF99 534 aaPredicted RBP16.31■□□□□ 0.2
RAVER1-206ENST00000611074 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
RAVER1-206ENST00000611074 PRAMEF22A3QJZ6 481 aa16.3■□□□□ 0.2
RAVER1-206ENST00000611074 BIN1O00499 593 aa16.3■□□□□ 0.2
RAVER1-206ENST00000611074 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
RAVER1-206ENST00000611074 CAVIN2O95810 425 aa16.3■□□□□ 0.2
RAVER1-206ENST00000611074 CDK11BP21127 795 aaKnown RBP16.3■□□□□ 0.2
RAVER1-206ENST00000611074 GTF3C6Q969F1 213 aa16.3■□□□□ 0.2
RAVER1-206ENST00000611074 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
RAVER1-206ENST00000611074 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
RAVER1-206ENST00000611074 DDX41Q9UJV9 622 aaKnown RBP16.3■□□□□ 0.2
RAVER1-206ENST00000611074 NEMFO60524 1076 aa16.3■□□□□ 0.2
RAVER1-206ENST00000611074 NAT10Q9H0A0 1025 aaKnown RBP16.3■□□□□ 0.2
RAVER1-206ENST00000611074 USP42Q9H9J4 1324 aaKnown RBP16.29■□□□□ 0.2
RAVER1-206ENST00000611074 CHGBP05060 677 aa16.29■□□□□ 0.2
RAVER1-206ENST00000611074 NBPF6Q5VWK0 638 aa16.29■□□□□ 0.2
RAVER1-206ENST00000611074 DDX46Q7L014 1031 aaKnown RBP16.29■□□□□ 0.2
RAVER1-206ENST00000611074 NBPF4Q96M43 638 aa16.29■□□□□ 0.2
RAVER1-206ENST00000611074 CTAGE5O15320 804 aa16.29■□□□□ 0.2
RAVER1-206ENST00000611074 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
RAVER1-206ENST00000611074 TAF5LO75529 589 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 RESTQ13127 1097 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
RAVER1-206ENST00000611074 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 NCOA5Q9HCD5 579 aaKnown RBP16.28■□□□□ 0.2
RAVER1-206ENST00000611074 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 SNW1Q13573 536 aaKnown RBP16.28■□□□□ 0.2
RAVER1-206ENST00000611074 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 KCNB2Q92953 911 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 ZNF396Q96N95 335 aaPredicted RBP16.28■□□□□ 0.2
RAVER1-206ENST00000611074 RIMS1Q86UR5 1692 aaKnown RBP16.28■□□□□ 0.2
RAVER1-206ENST00000611074 ADCY9O60503 1353 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 SLU7O95391 586 aaKnown RBP16.28■□□□□ 0.2
RAVER1-206ENST00000611074 CEBPAP49715 358 aaPredicted RBP16.28■□□□□ 0.2
RAVER1-206ENST00000611074 GABPB1Q06547 395 aaPredicted RBP16.28■□□□□ 0.2
RAVER1-206ENST00000611074 KMT5BQ4FZB7 885 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 ISM2Q6H9L7 571 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 TMC6Q7Z403 805 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
RAVER1-206ENST00000611074 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
RAVER1-206ENST00000611074 MTX1Q13505 466 aa16.27■□□□□ 0.19
RAVER1-206ENST00000611074 IQCB1Q15051 598 aa16.27■□□□□ 0.19
RAVER1-206ENST00000611074 SYCP1Q15431 976 aa16.27■□□□□ 0.19
RAVER1-206ENST00000611074 SYT10Q6XYQ8 523 aa16.27■□□□□ 0.19
RAVER1-206ENST00000611074 MRFAP1L1Q96HT8 127 aa16.27■□□□□ 0.19
RAVER1-206ENST00000611074 A0A1B0GVL5 298 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 PTPDC1A2A3K4 754 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 SCRN1Q12765 414 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 STK38Q15208 465 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 FBXO38Q6PIJ6 1188 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 TNRQ92752 1358 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.19
RAVER1-206ENST00000611074 TPM4P67936 248 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 ERO1AQ96HE7 468 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
RAVER1-206ENST00000611074 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
RAVER1-206ENST00000611074 POLR3DP05423 398 aaPredicted RBP16.26■□□□□ 0.19
RAVER1-206ENST00000611074 FAM177A1Q8N128 213 aaPredicted RBP16.26■□□□□ 0.19
RAVER1-206ENST00000611074 CCAR2Q8N163 923 aaKnown RBP16.26■□□□□ 0.19
RAVER1-206ENST00000611074 MYD88Q99836 296 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms