RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
LINC00343-212ENST00000608624 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
LINC00343-212ENST00000608624 DDX60Q8IY21 1712 aaKnown RBP11.54□□□□□ -0.56
LINC00343-212ENST00000608624 CT47B1P0C2W7 299 aaPredicted RBP11.53□□□□□ -0.56
LINC00343-212ENST00000608624 ERFEQ4G0M1 354 aa11.53□□□□□ -0.56
LINC00343-212ENST00000608624 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
LINC00343-212ENST00000608624 SETDB2Q96T68 719 aa11.53□□□□□ -0.56
LINC00343-212ENST00000608624 METTL22Q9BUU2 404 aaPredicted RBP11.53□□□□□ -0.56
LINC00343-212ENST00000608624 LAMB2P55268 1798 aa11.53□□□□□ -0.56
LINC00343-212ENST00000608624 UTRNP46939 3433 aa11.53□□□□□ -0.56
LINC00343-212ENST00000608624 CHRNA5P30532 468 aa11.52□□□□□ -0.57
LINC00343-212ENST00000608624 NBPF5PQ86XG9 351 aaPredicted RBP11.52□□□□□ -0.57
LINC00343-212ENST00000608624 CNBD1Q8NA66 436 aa11.52□□□□□ -0.57
LINC00343-212ENST00000608624 DNAAF4Q8WXU2 420 aa11.52□□□□□ -0.57
LINC00343-212ENST00000608624 NEURL1BA8MQ27 555 aa11.51□□□□□ -0.57
LINC00343-212ENST00000608624 RGL2O15211 777 aa11.51□□□□□ -0.57
LINC00343-212ENST00000608624 PLIN1O60240 522 aa11.51□□□□□ -0.57
LINC00343-212ENST00000608624 RLBP1P12271 317 aa11.51□□□□□ -0.57
LINC00343-212ENST00000608624 BEND3Q5T5X7 828 aa11.51□□□□□ -0.57
LINC00343-212ENST00000608624 SLC4A10Q6U841 1118 aa11.51□□□□□ -0.57
LINC00343-212ENST00000608624 FRAT1Q92837 279 aaPredicted RBP11.51□□□□□ -0.57
LINC00343-212ENST00000608624 FAM89AQ96GI7 184 aa11.51□□□□□ -0.57
LINC00343-212ENST00000608624 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
LINC00343-212ENST00000608624 BRCA1P38398 1863 aaKnown RBP11.51□□□□□ -0.57
LINC00343-212ENST00000608624 DDX58O95786 925 aaKnown RBP11.5□□□□□ -0.57
LINC00343-212ENST00000608624 HCLS1P14317 486 aaPredicted RBP11.5□□□□□ -0.57
LINC00343-212ENST00000608624 TRIM27P14373 513 aa11.5□□□□□ -0.57
LINC00343-212ENST00000608624 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
LINC00343-212ENST00000608624 CLUAP1Q96AJ1 413 aa11.5□□□□□ -0.57
LINC00343-212ENST00000608624 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
LINC00343-212ENST00000608624 TAF1P21675 1872 aa11.5□□□□□ -0.57
LINC00343-212ENST00000608624 IBTKQ9P2D0 1353 aaPredicted RBP11.5□□□□□ -0.57
LINC00343-212ENST00000608624 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
LINC00343-212ENST00000608624 A0A0G2JLW4 131 aa11.49□□□□□ -0.57
LINC00343-212ENST00000608624 DPEP1P16444 411 aa11.49□□□□□ -0.57
LINC00343-212ENST00000608624 C20orf194Q5TEA3 1177 aa11.49□□□□□ -0.57
LINC00343-212ENST00000608624 SYT17Q9BSW7 474 aa11.49□□□□□ -0.57
LINC00343-212ENST00000608624 UTP14AQ9BVJ6 771 aaKnown RBP11.49□□□□□ -0.57
LINC00343-212ENST00000608624 ABCC4O15439 1325 aa11.49□□□□□ -0.57
LINC00343-212ENST00000608624 PTPRCP08575 1304 aa11.49□□□□□ -0.57
LINC00343-212ENST00000608624 KCNA3P22001 575 aa11.48□□□□□ -0.57
LINC00343-212ENST00000608624 CASP7P55210 303 aa11.48□□□□□ -0.57
LINC00343-212ENST00000608624 TRIM28Q13263 835 aaKnown RBP11.48□□□□□ -0.57
LINC00343-212ENST00000608624 GCKRQ14397 625 aa11.48□□□□□ -0.57
LINC00343-212ENST00000608624 PARP10Q53GL7 1025 aa11.48□□□□□ -0.57
LINC00343-212ENST00000608624 HSP90AB3PQ58FF7 597 aa11.48□□□□□ -0.57
LINC00343-212ENST00000608624 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
LINC00343-212ENST00000608624 PDCD7Q8N8D1 485 aaKnown RBP11.48□□□□□ -0.57
LINC00343-212ENST00000608624 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
LINC00343-212ENST00000608624 CWC25Q9NXE8 425 aaPredicted RBP11.48□□□□□ -0.57
LINC00343-212ENST00000608624 TRMT112Q9UI30 125 aaKnown RBP11.48□□□□□ -0.57
LINC00343-212ENST00000608624 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
LINC00343-212ENST00000608624 ATF7IPQ6VMQ6 1270 aa11.47□□□□□ -0.57
LINC00343-212ENST00000608624 LINS1Q8NG48 757 aa11.47□□□□□ -0.57
LINC00343-212ENST00000608624 PANK1Q8TE04 598 aa11.47□□□□□ -0.57
LINC00343-212ENST00000608624 RIC1Q4ADV7 1423 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 SH3TC1Q8TE82 1336 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 NPHP1O15259 732 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 PCCAP05165 728 aaPredicted RBP11.46□□□□□ -0.57
LINC00343-212ENST00000608624 ST5P78524 1137 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 EPHA10Q5JZY3 1008 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 C2CD5Q86YS7 1000 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 CCDC191Q8NCU4 936 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 CCDC85AQ96PX6 553 aaPredicted RBP11.46□□□□□ -0.57
LINC00343-212ENST00000608624 CD2APQ9Y5K6 639 aa11.46□□□□□ -0.57
LINC00343-212ENST00000608624 SLX4Q8IY92 1834 aa11.46□□□□□ -0.58
LINC00343-212ENST00000608624 H7C1W4 665 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
LINC00343-212ENST00000608624 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
LINC00343-212ENST00000608624 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC00343-212ENST00000608624 NEXNQ0ZGT2 675 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 OLFM4Q6UX06 510 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 TPTE2Q6XPS3 522 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 PPP1R42Q7Z4L9 355 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 ZBTB38Q8NAP3 1195 aaPredicted RBP11.45□□□□□ -0.58
LINC00343-212ENST00000608624 KAZALD1Q96I82 304 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 BRIP1Q9BX63 1249 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 API5Q9BZZ5 524 aaKnown RBP11.45□□□□□ -0.58
LINC00343-212ENST00000608624 SRCIN1Q9C0H9 1055 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 MYH3P11055 1940 aa11.45□□□□□ -0.58
LINC00343-212ENST00000608624 KLRG2A4D1S0 409 aaPredicted RBP11.44□□□□□ -0.58
LINC00343-212ENST00000608624 GTF2E1P29083 439 aaPredicted RBP11.44□□□□□ -0.58
LINC00343-212ENST00000608624 CRY2Q49AN0 593 aa11.44□□□□□ -0.58
LINC00343-212ENST00000608624 ZKSCAN2Q63HK3 967 aa11.44□□□□□ -0.58
LINC00343-212ENST00000608624 FAM212AQ96EL1 285 aa11.44□□□□□ -0.58
LINC00343-212ENST00000608624 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
LINC00343-212ENST00000608624 MEIS3Q99687 375 aa11.44□□□□□ -0.58
LINC00343-212ENST00000608624 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
LINC00343-212ENST00000608624 SPEF2Q9C093 1822 aa11.44□□□□□ -0.58
LINC00343-212ENST00000608624 GRM8O00222 908 aa11.43□□□□□ -0.58
LINC00343-212ENST00000608624 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
LINC00343-212ENST00000608624 SRGNP10124 158 aa11.43□□□□□ -0.58
LINC00343-212ENST00000608624 SLC10A5Q5PT55 438 aa11.43□□□□□ -0.58
LINC00343-212ENST00000608624 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
LINC00343-212ENST00000608624 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
LINC00343-212ENST00000608624 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
LINC00343-212ENST00000608624 FOXO4P98177 505 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms