RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 COL18A1P39060 1754 aa11.21□□□□□ -0.61
FARP1-220ENST00000596613 FBLN1P23142 703 aa11.21□□□□□ -0.61
FARP1-220ENST00000596613 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
FARP1-220ENST00000596613 RPIAP49247 311 aa11.21□□□□□ -0.61
FARP1-220ENST00000596613 MMP16P51512 607 aa11.21□□□□□ -0.61
FARP1-220ENST00000596613 IRF5Q13568 498 aa11.21□□□□□ -0.61
FARP1-220ENST00000596613 R3HDM1Q15032 1099 aaKnown RBP11.21□□□□□ -0.61
FARP1-220ENST00000596613 MORC1Q86VD1 984 aa11.21□□□□□ -0.61
FARP1-220ENST00000596613 DISP2A7MBM2 1401 aa11.2□□□□□ -0.62
FARP1-220ENST00000596613 FLT4P35916 1363 aa11.2□□□□□ -0.62
FARP1-220ENST00000596613 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
FARP1-220ENST00000596613 RGPD5Q99666 1765 aa11.2□□□□□ -0.62
FARP1-220ENST00000596613 PARP4Q9UKK3 1724 aaKnown RBP11.2□□□□□ -0.62
FARP1-220ENST00000596613 INSRP06213 1382 aa11.19□□□□□ -0.62
FARP1-220ENST00000596613 LTN1O94822 1766 aa11.19□□□□□ -0.62
FARP1-220ENST00000596613 GDF9O60383 454 aa11.19□□□□□ -0.62
FARP1-220ENST00000596613 CD2BP2O95400 341 aaKnown RBP11.19□□□□□ -0.62
FARP1-220ENST00000596613 F12P00748 615 aaPredicted RBP11.19□□□□□ -0.62
FARP1-220ENST00000596613 HSP90AB2PQ58FF8 381 aa11.19□□□□□ -0.62
FARP1-220ENST00000596613 ZNF787Q6DD87 383 aa11.19□□□□□ -0.62
FARP1-220ENST00000596613 ACSBG1Q96GR2 724 aa11.19□□□□□ -0.62
FARP1-220ENST00000596613 STK32BQ9NY57 414 aa11.19□□□□□ -0.62
FARP1-220ENST00000596613 USP54Q70EL1 1684 aa11.18□□□□□ -0.62
FARP1-220ENST00000596613 PLA2G2CQ5R387 149 aa11.18□□□□□ -0.62
FARP1-220ENST00000596613 MAP10Q9P2G4 905 aa11.18□□□□□ -0.62
FARP1-220ENST00000596613 SPG7Q9UQ90 795 aa11.18□□□□□ -0.62
FARP1-220ENST00000596613 BCL9O00512 1426 aa11.18□□□□□ -0.62
FARP1-220ENST00000596613 NBPF6Q5VWK0 638 aa11.17□□□□□ -0.62
FARP1-220ENST00000596613 NBPF4Q96M43 638 aa11.17□□□□□ -0.62
FARP1-220ENST00000596613 NUDT12Q9BQG2 462 aa11.17□□□□□ -0.62
FARP1-220ENST00000596613 PPP1R1BQ9UD71 204 aaPredicted RBP11.17□□□□□ -0.62
FARP1-220ENST00000596613 TNS2Q63HR2 1409 aa11.17□□□□□ -0.62
FARP1-220ENST00000596613 NSD2O96028 1365 aa11.16□□□□□ -0.62
FARP1-220ENST00000596613 WASHC2AQ641Q2 1341 aa11.16□□□□□ -0.62
FARP1-220ENST00000596613 CCNYL3P0C7X3 344 aa11.16□□□□□ -0.62
FARP1-220ENST00000596613 EVA1BQ9NVM1 165 aa11.16□□□□□ -0.62
FARP1-220ENST00000596613 EMILIN1Q9Y6C2 1016 aa11.16□□□□□ -0.62
FARP1-220ENST00000596613 PCDH11XQ9BZA7 1347 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 PCDH11YQ9BZA8 1340 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 KAT6BQ8WYB5 2073 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 POM121CA8CG34 1229 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 KCNQ2O43526 872 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 CTHP32929 405 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 USHBP1Q8N6Y0 703 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 SPON1Q9HCB6 807 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 POLKQ9UBT6 870 aa11.15□□□□□ -0.62
FARP1-220ENST00000596613 FCF1Q9Y324 198 aaKnown RBP11.15□□□□□ -0.62
FARP1-220ENST00000596613 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
FARP1-220ENST00000596613 KIF20BQ96Q89 1820 aa11.14□□□□□ -0.63
FARP1-220ENST00000596613 LRRC37A3O60309 1634 aa11.14□□□□□ -0.63
FARP1-220ENST00000596613 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
FARP1-220ENST00000596613 SLC27A3Q5K4L6 730 aa11.14□□□□□ -0.63
FARP1-220ENST00000596613 PNMA1Q8ND90 353 aa11.14□□□□□ -0.63
FARP1-220ENST00000596613 ARID3AQ99856 593 aa11.14□□□□□ -0.63
FARP1-220ENST00000596613 FAM187AA6NFU0 413 aa11.13□□□□□ -0.63
FARP1-220ENST00000596613 ZBTB24O43167 697 aaPredicted RBP11.13□□□□□ -0.63
FARP1-220ENST00000596613 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
FARP1-220ENST00000596613 FKBPLQ9UIM3 349 aa11.13□□□□□ -0.63
FARP1-220ENST00000596613 EP400Q96L91 3159 aa11.13□□□□□ -0.63
FARP1-220ENST00000596613 KCNH2Q12809 1159 aa11.12□□□□□ -0.63
FARP1-220ENST00000596613 PLEKHO1Q53GL0 409 aaPredicted RBP11.12□□□□□ -0.63
FARP1-220ENST00000596613 KIF7Q2M1P5 1343 aa11.11□□□□□ -0.63
FARP1-220ENST00000596613 HSP90AB1P08238 724 aaKnown RBP11.11□□□□□ -0.63
FARP1-220ENST00000596613 VAC14Q08AM6 782 aa11.11□□□□□ -0.63
FARP1-220ENST00000596613 SLC15A2Q16348 729 aa11.11□□□□□ -0.63
FARP1-220ENST00000596613 IFNL2Q8IZJ0 200 aa11.11□□□□□ -0.63
FARP1-220ENST00000596613 SMARCC1Q92922 1105 aaPredicted RBP11.11□□□□□ -0.63
FARP1-220ENST00000596613 TNS1Q9HBL0 1735 aaKnown RBP11.11□□□□□ -0.63
FARP1-220ENST00000596613 WNK3Q9BYP7 1800 aa11.1□□□□□ -0.63
FARP1-220ENST00000596613 FOXC1Q12948 553 aa11.1□□□□□ -0.63
FARP1-220ENST00000596613 CNGB1Q14028 1251 aaPredicted RBP11.1□□□□□ -0.63
FARP1-220ENST00000596613 AMOTQ4VCS5 1084 aa11.1□□□□□ -0.63
FARP1-220ENST00000596613 MPRIPQ6WCQ1 1025 aa11.1□□□□□ -0.63
FARP1-220ENST00000596613 PTF1AQ7RTS3 328 aa11.1□□□□□ -0.63
FARP1-220ENST00000596613 GLMNQ92990 594 aa11.1□□□□□ -0.63
FARP1-220ENST00000596613 TFCP2L1Q9NZI6 479 aa11.1□□□□□ -0.63
FARP1-220ENST00000596613 PKD2L1Q9P0L9 805 aa11.1□□□□□ -0.63
FARP1-220ENST00000596613 EIF4A2Q14240 407 aaKnown RBP11.09□□□□□ -0.63
FARP1-220ENST00000596613 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
FARP1-220ENST00000596613 CC2D1BQ5T0F9 858 aaKnown RBP11.09□□□□□ -0.63
FARP1-220ENST00000596613 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
FARP1-220ENST00000596613 ARXQ96QS3 562 aa11.09□□□□□ -0.63
FARP1-220ENST00000596613 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
FARP1-220ENST00000596613 MYOM1P52179 1685 aa11.08□□□□□ -0.64
FARP1-220ENST00000596613 CALR3Q96L12 384 aaKnown RBP11.08□□□□□ -0.64
FARP1-220ENST00000596613 CFAP53Q96M91 514 aa11.08□□□□□ -0.64
FARP1-220ENST00000596613 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
FARP1-220ENST00000596613 CCNL1Q9UK58 526 aaPredicted RBP11.08□□□□□ -0.64
FARP1-220ENST00000596613 PEAK1Q9H792 1746 aa11.08□□□□□ -0.64
FARP1-220ENST00000596613 MAP2P11137 1827 aaKnown RBP11.07□□□□□ -0.64
FARP1-220ENST00000596613 SBF2Q86WG5 1849 aa11.07□□□□□ -0.64
FARP1-220ENST00000596613 MTHFSP49914 203 aa11.07□□□□□ -0.64
FARP1-220ENST00000596613 PTCRAQ6ISU1 281 aaPredicted RBP11.07□□□□□ -0.64
FARP1-220ENST00000596613 CCDC97Q96F63 343 aaPredicted RBP11.07□□□□□ -0.64
FARP1-220ENST00000596613 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
FARP1-220ENST00000596613 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
FARP1-220ENST00000596613 FBXO45P0C2W1 286 aa11.06□□□□□ -0.64
FARP1-220ENST00000596613 POLD1P28340 1107 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms