RNA–Protein interactions for RNA: ENST00000596559.5

ZNF28-208, Transcript of zinc finger protein 28, humanhuman

TSL 5

Gene ZNF28, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-208ENST00000596559 ZNF644Q9H582 1327 aaPredicted RBP4.17□□□□□ -1.74
ZNF28-208ENST00000596559 NCOA2Q15596 1464 aa4.17□□□□□ -1.74
ZNF28-208ENST00000596559 ZC3H13Q5T200 1668 aaKnown RBP4.16□□□□□ -1.74
ZNF28-208ENST00000596559 TMEM2Q9UHN6 1383 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 PLXNC1O60486 1568 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 NWD1Q149M9 1564 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 FMN1Q68DA7 1419 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 CSB-PGBD3P0DP91 1061 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 ADH6P28332 368 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 PHKA2P46019 1235 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 PRRT3Q5FWE3 981 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 EFHC2Q5JST6 749 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 CC2D2BQ6DHV5 1058 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 PGBD3Q8N328 593 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 FNBP4Q8N3X1 1017 aaPredicted RBP4.16□□□□□ -1.74
ZNF28-208ENST00000596559 SHPRHQ149N8 1683 aa4.16□□□□□ -1.74
ZNF28-208ENST00000596559 CFAP65Q6ZU64 1925 aaKnown RBP4.15□□□□□ -1.74
ZNF28-208ENST00000596559 KIAA1107Q9UPP5 1409 aa4.15□□□□□ -1.74
ZNF28-208ENST00000596559 SPDYE3A6NKU9 549 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 GIGYF1O75420 1035 aaPredicted RBP4.15□□□□□ -1.75
ZNF28-208ENST00000596559 TSPY4P0CV99 314 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 TSPY10P0CW01 314 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 ELNP15502 786 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 MSX1P28360 303 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 CYP2U1Q7Z449 544 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 ARHGEF10LQ9HCE6 1279 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 AVENQ9NQS1 362 aaPredicted RBP4.15□□□□□ -1.75
ZNF28-208ENST00000596559 HCN2Q9UL51 889 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 CCDC9Q9Y3X0 531 aaKnown RBP4.15□□□□□ -1.75
ZNF28-208ENST00000596559 GTF3C3Q9Y5Q9 886 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 PLEKHH2Q8IVE3 1493 aa4.15□□□□□ -1.75
ZNF28-208ENST00000596559 PNPLA6Q8IY17 1366 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 CCNB3Q8WWL7 1395 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 PREX2Q70Z35 1606 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 ATRNO75882 1429 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 SETD5Q9C0A6 1442 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 ARHGAP23Q9P227 1491 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 FAM229AH3BQW9 127 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 IDI1Q13907 227 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 KRT27Q7Z3Y8 459 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 NACC1Q96RE7 527 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 SPON1Q9HCB6 807 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 ABCC3O15438 1527 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 TIAM1Q13009 1591 aa4.14□□□□□ -1.75
ZNF28-208ENST00000596559 NHSL1Q5SYE7 1610 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 AHDC1Q5TGY3 1603 aaPredicted RBP4.13□□□□□ -1.75
ZNF28-208ENST00000596559 RTEL1-TNFRSF6BF6WH68 1400 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 ADGBQ8N7X0 1667 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 NKTRP30414 1462 aaKnown RBP4.13□□□□□ -1.75
ZNF28-208ENST00000596559 ERVK-7P63135 1459 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 SLIT1O75093 1534 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 GPATCH8Q9UKJ3 1502 aaKnown RBP4.13□□□□□ -1.75
ZNF28-208ENST00000596559 TRAK2O60296 914 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 SCTRP47872 440 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 EZH2Q15910 746 aaKnown RBP4.13□□□□□ -1.75
ZNF28-208ENST00000596559 TMEM132AQ24JP5 1023 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 NBPF8Q3BBV2 869 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 C4orf17Q53FE4 359 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 UNC5CLQ8IV45 518 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 CRISPLD1Q9H336 500 aa4.13□□□□□ -1.75
ZNF28-208ENST00000596559 DNAAF2Q9NVR5 837 aaKnown RBP4.13□□□□□ -1.75
ZNF28-208ENST00000596559 ARID1BQ8NFD5 2236 aaPredicted RBP4.13□□□□□ -1.75
ZNF28-208ENST00000596559 NCOA3Q9Y6Q9 1424 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 INO80Q9ULG1 1556 aaPredicted RBP4.12□□□□□ -1.75
ZNF28-208ENST00000596559 KCNQ2O43526 872 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 IL2RAP01589 272 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 CLK2P49760 499 aaKnown RBP4.12□□□□□ -1.75
ZNF28-208ENST00000596559 CENPCQ03188 943 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 LAMC2Q13753 1193 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 COL9A3Q14050 684 aaPredicted RBP4.12□□□□□ -1.75
ZNF28-208ENST00000596559 ADGRE1Q14246 886 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 FAM182BQ5T319 152 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 ESYT1Q9BSJ8 1104 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 ZCCHC2Q9C0B9 1178 aaKnown RBP4.12□□□□□ -1.75
ZNF28-208ENST00000596559 OSBPL3Q9H4L5 887 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 RAB6BQ9NRW1 208 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 RNF112Q9ULX5 631 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 AMOTL2Q9Y2J4 779 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 TBX22Q9Y458 520 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 HRH3Q9Y5N1 445 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 UBR1Q8IWV7 1749 aa4.12□□□□□ -1.75
ZNF28-208ENST00000596559 BCL9LQ86UU0 1499 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 DIP2AQ14689 1571 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 KDM5AP29375 1690 aaKnown RBP4.11□□□□□ -1.75
ZNF28-208ENST00000596559 GRIK4Q16099 956 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 FIGNL1Q6PIW4 674 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 EPS8L1Q8TE68 723 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 CNKSR1Q969H4 720 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 ZSCAN10Q96SZ4 725 aaPredicted RBP4.11□□□□□ -1.75
ZNF28-208ENST00000596559 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 FHDC1Q9C0D6 1143 aaPredicted RBP4.11□□□□□ -1.75
ZNF28-208ENST00000596559 PCDHGC4Q9Y5F7 938 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 PTCH1Q13635 1447 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 CCDC18Q5T9S5 1454 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 ARHGAP35Q9NRY4 1499 aa4.11□□□□□ -1.75
ZNF28-208ENST00000596559 CDC42BPAQ5VT25 1732 aa4.1□□□□□ -1.75
ZNF28-208ENST00000596559 CD33P20138 364 aa4.1□□□□□ -1.75
ZNF28-208ENST00000596559 PCBP4P57723 403 aaKnown RBP4.1□□□□□ -1.75
ZNF28-208ENST00000596559 MBTPS1Q14703 1052 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms