RNA–Protein interactions for RNA: ENST00000596559.5

ZNF28-208, Transcript of zinc finger protein 28, humanhuman

TSL 5

Gene ZNF28, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-208ENST00000596559 AEBP2Q6ZN18 517 aaPredicted RBP15.03■□□□□ -0
ZNF28-208ENST00000596559 CHIC1Q5VXU3 224 aa14□□□□□ -0.17
ZNF28-208ENST00000596559 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
ZNF28-208ENST00000596559 PHF23Q9BUL5 403 aaPredicted RBP12.63□□□□□ -0.39
ZNF28-208ENST00000596559 FOXD1Q16676 465 aa12.05□□□□□ -0.48
ZNF28-208ENST00000596559 POTEDQ86YR6 584 aa11.96□□□□□ -0.49
ZNF28-208ENST00000596559 MSH5O43196 834 aa11.44□□□□□ -0.58
ZNF28-208ENST00000596559 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
ZNF28-208ENST00000596559 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
ZNF28-208ENST00000596559 ADRA2BP18089 450 aa10.85□□□□□ -0.67
ZNF28-208ENST00000596559 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
ZNF28-208ENST00000596559 DMRT2Q9Y5R5 561 aa10.14□□□□□ -0.79
ZNF28-208ENST00000596559 MAPK8IP2Q13387 824 aaPredicted RBP10.12□□□□□ -0.79
ZNF28-208ENST00000596559 CACNB1Q02641 598 aaPredicted RBP10.09□□□□□ -0.79
ZNF28-208ENST00000596559 SCAF1Q9H7N4 1312 aaKnown RBP9.89□□□□□ -0.83
ZNF28-208ENST00000596559 RNF39Q9H2S5 420 aa9.74□□□□□ -0.85
ZNF28-208ENST00000596559 DCAF8L1A6NGE4 600 aa9.7□□□□□ -0.86
ZNF28-208ENST00000596559 HOXD11P31277 338 aaPredicted RBP9.6□□□□□ -0.87
ZNF28-208ENST00000596559 C1QBPQ07021 282 aaKnown RBP9.55□□□□□ -0.88
ZNF28-208ENST00000596559 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
ZNF28-208ENST00000596559 RNF216Q9NWF9 866 aaPredicted RBP9.39□□□□□ -0.91
ZNF28-208ENST00000596559 CNKSR2Q8WXI2 1034 aa9.35□□□□□ -0.91
ZNF28-208ENST00000596559 DNAJC5BQ9UF47 199 aa9.35□□□□□ -0.91
ZNF28-208ENST00000596559 POTEHQ6S545 545 aa9.27□□□□□ -0.93
ZNF28-208ENST00000596559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.11□□□□□ -0.95
ZNF28-208ENST00000596559 DSG3P32926 999 aa8.96□□□□□ -0.98
ZNF28-208ENST00000596559 NCBP3Q53F19 620 aaKnown RBP8.9□□□□□ -0.98
ZNF28-208ENST00000596559 SPINK5Q9NQ38 1064 aaPredicted RBP8.9□□□□□ -0.98
ZNF28-208ENST00000596559 U3KPZ7 1027 aaPredicted RBP8.9□□□□□ -0.98
ZNF28-208ENST00000596559 CAPN15O75808 1086 aa8.88□□□□□ -0.99
ZNF28-208ENST00000596559 NPM3O75607 178 aaKnown RBP8.81□□□□□ -1
ZNF28-208ENST00000596559 ABCB7O75027 752 aa8.65□□□□□ -1.02
ZNF28-208ENST00000596559 TRHP20396 242 aaPredicted RBP8.63□□□□□ -1.03
ZNF28-208ENST00000596559 ZNF219Q9P2Y4 722 aaPredicted RBP8.6□□□□□ -1.03
ZNF28-208ENST00000596559 APLP2Q06481 763 aa8.55□□□□□ -1.04
ZNF28-208ENST00000596559 SLC4A2P04920 1241 aa8.54□□□□□ -1.04
ZNF28-208ENST00000596559 CHRDL2Q6WN34 429 aa8.54□□□□□ -1.04
ZNF28-208ENST00000596559 RBM42Q9BTD8 480 aaKnown RBP8.54□□□□□ -1.04
ZNF28-208ENST00000596559 SP7Q8TDD2 431 aaPredicted RBP8.48□□□□□ -1.05
ZNF28-208ENST00000596559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.45□□□□□ -1.06
ZNF28-208ENST00000596559 HNRNPUL2Q1KMD3 747 aaKnown RBP8.45□□□□□ -1.06
ZNF28-208ENST00000596559 SAMD1Q6SPF0 538 aaPredicted RBP8.38□□□□□ -1.07
ZNF28-208ENST00000596559 POLA2Q14181 598 aa8.3□□□□□ -1.08
ZNF28-208ENST00000596559 PIP4P2Q8N4L2 257 aa8.26□□□□□ -1.09
ZNF28-208ENST00000596559 AKT1S1Q96B36 256 aa8.26□□□□□ -1.09
ZNF28-208ENST00000596559 KCNA4P22459 653 aa8.23□□□□□ -1.09
ZNF28-208ENST00000596559 HAX1O00165 279 aa8.2□□□□□ -1.1
ZNF28-208ENST00000596559 REM2Q8IYK8 340 aaPredicted RBP8.19□□□□□ -1.1
ZNF28-208ENST00000596559 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
ZNF28-208ENST00000596559 FXR2P51116 673 aaKnown RBP eCLIP8.14□□□□□ -1.11
ZNF28-208ENST00000596559 PITPNM1O00562 1244 aa8.11□□□□□ -1.11
ZNF28-208ENST00000596559 EVX2Q03828 476 aa8.1□□□□□ -1.11
ZNF28-208ENST00000596559 ZBTB12Q9Y330 459 aaPredicted RBP8.08□□□□□ -1.12
ZNF28-208ENST00000596559 OSCARQ8IYS5 282 aa8.07□□□□□ -1.12
ZNF28-208ENST00000596559 ATF5Q9Y2D1 282 aaPredicted RBP8.02□□□□□ -1.13
ZNF28-208ENST00000596559 LHX8Q68G74 356 aa7.94□□□□□ -1.14
ZNF28-208ENST00000596559 C19orf67A6NJJ6 358 aa7.9□□□□□ -1.14
ZNF28-208ENST00000596559 GABBR2O75899 941 aa7.88□□□□□ -1.15
ZNF28-208ENST00000596559 PRKAR2AP13861 404 aaKnown RBP7.88□□□□□ -1.15
ZNF28-208ENST00000596559 FOXD4L1Q9NU39 408 aa7.82□□□□□ -1.16
ZNF28-208ENST00000596559 SPDYE2BA6NHP3 402 aa7.81□□□□□ -1.16
ZNF28-208ENST00000596559 SPDYE6P0CI01 402 aa7.81□□□□□ -1.16
ZNF28-208ENST00000596559 SPDYE2Q495Y8 402 aa7.81□□□□□ -1.16
ZNF28-208ENST00000596559 PLSCR2Q9NRY7 297 aa7.79□□□□□ -1.16
ZNF28-208ENST00000596559 SPDYE1Q8NFV5 336 aaPredicted RBP7.78□□□□□ -1.16
ZNF28-208ENST00000596559 CLEC11AQ9Y240 323 aa7.78□□□□□ -1.16
ZNF28-208ENST00000596559 POTEIP0CG38 1075 aa7.73□□□□□ -1.17
ZNF28-208ENST00000596559 CHADLQ6NUI6 762 aa7.7□□□□□ -1.18
ZNF28-208ENST00000596559 FBLN2P98095 1184 aa7.69□□□□□ -1.18
ZNF28-208ENST00000596559 SSUH2Q9Y2M2 353 aa7.68□□□□□ -1.18
ZNF28-208ENST00000596559 SLC4A1APQ9BWU0 796 aaKnown RBP7.66□□□□□ -1.18
ZNF28-208ENST00000596559 ZNF692Q9BU19 519 aaPredicted RBP7.63□□□□□ -1.19
ZNF28-208ENST00000596559 ATXN8OSP0DMR3 200 aa7.62□□□□□ -1.19
ZNF28-208ENST00000596559 MKRN4PQ13434 485 aaPredicted RBP7.62□□□□□ -1.19
ZNF28-208ENST00000596559 CD44P16070 742 aaKnown RBP7.6□□□□□ -1.19
ZNF28-208ENST00000596559 PRR29P0C7W0 189 aa7.59□□□□□ -1.19
ZNF28-208ENST00000596559 ZBTB22O15209 634 aa7.58□□□□□ -1.2
ZNF28-208ENST00000596559 CLCN6P51797 869 aa7.58□□□□□ -1.2
ZNF28-208ENST00000596559 DCBLD2Q96PD2 775 aa7.55□□□□□ -1.2
ZNF28-208ENST00000596559 FARP1Q9Y4F1 1045 aaPredicted RBP7.54□□□□□ -1.2
ZNF28-208ENST00000596559 OTUD5Q96G74 571 aa7.52□□□□□ -1.21
ZNF28-208ENST00000596559 PABPN1Q86U42 306 aaKnown RBP eCLIP7.51□□□□□ -1.21
ZNF28-208ENST00000596559 POTEMA6NI47 508 aa7.5□□□□□ -1.21
ZNF28-208ENST00000596559 ZNF579Q8NAF0 562 aaKnown RBP7.48□□□□□ -1.21
ZNF28-208ENST00000596559 POTEGQ6S5H5 508 aa7.47□□□□□ -1.21
ZNF28-208ENST00000596559 POTEB2H3BUK9 544 aa7.46□□□□□ -1.22
ZNF28-208ENST00000596559 GALR2O43603 387 aaPredicted RBP7.42□□□□□ -1.22
ZNF28-208ENST00000596559 ZRANB1Q9UGI0 708 aa7.42□□□□□ -1.22
ZNF28-208ENST00000596559 PCDH10Q9P2E7 1040 aa7.39□□□□□ -1.23
ZNF28-208ENST00000596559 PELP1Q8IZL8 1130 aaKnown RBP7.33□□□□□ -1.24
ZNF28-208ENST00000596559 CREBZFQ9NS37 354 aa7.33□□□□□ -1.24
ZNF28-208ENST00000596559 LCE2DQ5TA82 110 aaPredicted RBP7.3□□□□□ -1.24
ZNF28-208ENST00000596559 PHF12Q96QT6 1004 aa7.3□□□□□ -1.24
ZNF28-208ENST00000596559 POTEJP0CG39 1038 aa7.29□□□□□ -1.24
ZNF28-208ENST00000596559 METRNQ9UJH8 293 aa7.26□□□□□ -1.25
ZNF28-208ENST00000596559 PAK3O75914 559 aaPredicted RBP7.24□□□□□ -1.25
ZNF28-208ENST00000596559 ASTLQ6HA08 431 aaPredicted RBP7.24□□□□□ -1.25
ZNF28-208ENST00000596559 MAMSTRQ6ZN01 415 aa7.22□□□□□ -1.25
ZNF28-208ENST00000596559 SLC39A7Q92504 469 aa7.22□□□□□ -1.25
ZNF28-208ENST00000596559 ATMINO43313 823 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms