RNA–Protein interactions for RNA: ENST00000591348.5

CROCCP3-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best)

Gene CROCCP3, Length 1,695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-206ENST00000591348 CCDC85AQ96PX6 553 aaPredicted RBP27.35■■□□□ 1.97
CROCCP3-206ENST00000591348 CSF1RP07333 972 aa27.34■■□□□ 1.97
CROCCP3-206ENST00000591348 KLRG2A4D1S0 409 aaPredicted RBP27.33■■□□□ 1.97
CROCCP3-206ENST00000591348 FAM161AQ3B820 660 aa27.32■■□□□ 1.96
CROCCP3-206ENST00000591348 CRY2Q49AN0 593 aa27.32■■□□□ 1.96
CROCCP3-206ENST00000591348 CEP85Q6P2H3 762 aa27.32■■□□□ 1.96
CROCCP3-206ENST00000591348 RPGRQ92834 1020 aaKnown RBP27.32■■□□□ 1.96
CROCCP3-206ENST00000591348 PDZRN3Q9UPQ7 1066 aa27.32■■□□□ 1.96
CROCCP3-206ENST00000591348 GREM2Q9H772 168 aa27.31■■□□□ 1.96
CROCCP3-206ENST00000591348 CD2APQ9Y5K6 639 aa27.31■■□□□ 1.96
CROCCP3-206ENST00000591348 H0YIN7 160 aa27.3■■□□□ 1.96
CROCCP3-206ENST00000591348 MTX1Q13505 466 aa27.3■■□□□ 1.96
CROCCP3-206ENST00000591348 C2CD5Q86YS7 1000 aa27.3■■□□□ 1.96
CROCCP3-206ENST00000591348 RPAP2Q8IXW5 612 aaPredicted RBP27.3■■□□□ 1.96
CROCCP3-206ENST00000591348 KIF13BQ9NQT8 1826 aa27.3■■□□□ 1.96
CROCCP3-206ENST00000591348 SRGAP3O43295 1099 aa27.3■■□□□ 1.96
CROCCP3-206ENST00000591348 SRGNP10124 158 aa27.29■■□□□ 1.96
CROCCP3-206ENST00000591348 ATP8B2P98198 1209 aa27.29■■□□□ 1.96
CROCCP3-206ENST00000591348 IFIT5Q13325 482 aaKnown RBP27.29■■□□□ 1.96
CROCCP3-206ENST00000591348 CCDC57Q2TAC2 916 aa27.29■■□□□ 1.96
CROCCP3-206ENST00000591348 DDX46Q7L014 1031 aaKnown RBP27.29■■□□□ 1.96
CROCCP3-206ENST00000591348 RTL9Q8NET4 1388 aa27.29■■□□□ 1.96
CROCCP3-206ENST00000591348 ITGA6P23229 1130 aa27.28■■□□□ 1.96
CROCCP3-206ENST00000591348 TGFB2P61812 414 aa27.28■■□□□ 1.96
CROCCP3-206ENST00000591348 PCDHB15Q9Y5E8 787 aa27.28■■□□□ 1.96
CROCCP3-206ENST00000591348 PNMA6EA0A0J9YXQ4 647 aa27.27■■□□□ 1.96
CROCCP3-206ENST00000591348 NPR1P16066 1061 aa27.27■■□□□ 1.96
CROCCP3-206ENST00000591348 CHRNA5P30532 468 aa27.27■■□□□ 1.96
CROCCP3-206ENST00000591348 RBM17Q96I25 401 aaKnown RBP27.27■■□□□ 1.96
CROCCP3-206ENST00000591348 ANKRD18BA2A2Z9 1011 aa27.27■■□□□ 1.96
CROCCP3-206ENST00000591348 MASTLQ96GX5 879 aa27.27■■□□□ 1.96
CROCCP3-206ENST00000591348 SEC31BQ9NQW1 1179 aa27.27■■□□□ 1.96
CROCCP3-206ENST00000591348 HMMRO75330 724 aa27.26■■□□□ 1.95
CROCCP3-206ENST00000591348 ZNF622Q969S3 477 aaKnown RBP eCLIP27.26■■□□□ 1.95
CROCCP3-206ENST00000591348 COL11A2P13942 1736 aaPredicted RBP27.25■■□□□ 1.95
CROCCP3-206ENST00000591348 HOXA10P31260 410 aaPredicted RBP27.25■■□□□ 1.95
CROCCP3-206ENST00000591348 TAF7LQ5H9L4 462 aa27.25■■□□□ 1.95
CROCCP3-206ENST00000591348 CDC5LQ99459 802 aaKnown RBP27.25■■□□□ 1.95
CROCCP3-206ENST00000591348 A0A0G2JLW4 131 aa27.24■■□□□ 1.95
CROCCP3-206ENST00000591348 DPEP1P16444 411 aa27.24■■□□□ 1.95
CROCCP3-206ENST00000591348 FHDC1Q9C0D6 1143 aaPredicted RBP27.24■■□□□ 1.95
CROCCP3-206ENST00000591348 ERICH6BQ5W0A0 696 aa27.24■■□□□ 1.95
CROCCP3-206ENST00000591348 STYK1Q6J9G0 422 aa27.24■■□□□ 1.95
CROCCP3-206ENST00000591348 SIRT2Q8IXJ6 389 aa27.24■■□□□ 1.95
CROCCP3-206ENST00000591348 SSH3Q8TE77 659 aa27.24■■□□□ 1.95
CROCCP3-206ENST00000591348 CRAMP1Q96RY5 1269 aa27.23■■□□□ 1.95
CROCCP3-206ENST00000591348 ALDH1B1P30837 517 aa27.22■■□□□ 1.95
CROCCP3-206ENST00000591348 GRAPQ13588 217 aa27.22■■□□□ 1.95
CROCCP3-206ENST00000591348 POLA2Q14181 598 aa27.22■■□□□ 1.95
CROCCP3-206ENST00000591348 ANKRD18AQ8IVF6 992 aa27.22■■□□□ 1.95
CROCCP3-206ENST00000591348 GRAPLQ8TC17 118 aaPredicted RBP27.22■■□□□ 1.95
CROCCP3-206ENST00000591348 LRP5O75197 1615 aa27.22■■□□□ 1.95
CROCCP3-206ENST00000591348 IGHMBP2P38935 993 aaKnown RBP27.21■■□□□ 1.95
CROCCP3-206ENST00000591348 RFX5P48382 616 aaPredicted RBP27.21■■□□□ 1.95
CROCCP3-206ENST00000591348 CELF1Q92879 486 aaKnown RBP27.21■■□□□ 1.95
CROCCP3-206ENST00000591348 KLHDC4Q8TBB5 520 aa27.21■■□□□ 1.95
CROCCP3-206ENST00000591348 CNKSR1Q969H4 720 aa27.21■■□□□ 1.95
CROCCP3-206ENST00000591348 ZNF594Q96JF6 807 aaPredicted RBP27.21■■□□□ 1.95
CROCCP3-206ENST00000591348 RPS8P62241 208 aaKnown RBP27.2■■□□□ 1.94
CROCCP3-206ENST00000591348 PTPN12Q05209 780 aaKnown RBP27.2■■□□□ 1.94
CROCCP3-206ENST00000591348 NLGN2Q8NFZ4 835 aa27.19■■□□□ 1.94
CROCCP3-206ENST00000591348 MPHOSPH8Q99549 860 aa27.19■■□□□ 1.94
CROCCP3-206ENST00000591348 PA2G4Q9UQ80 394 aaKnown RBP27.19■■□□□ 1.94
CROCCP3-206ENST00000591348 KIAA1551Q9HCM1 1747 aa27.19■■□□□ 1.94
CROCCP3-206ENST00000591348 TAF1P21675 1872 aa27.19■■□□□ 1.94
CROCCP3-206ENST00000591348 KCNA3P22001 575 aa27.18■■□□□ 1.94
CROCCP3-206ENST00000591348 COPRSQ9NQ92 184 aa27.18■■□□□ 1.94
CROCCP3-206ENST00000591348 DLEC1Q9Y238 1755 aa27.18■■□□□ 1.94
CROCCP3-206ENST00000591348 BBOX1O75936 387 aa27.17■■□□□ 1.94
CROCCP3-206ENST00000591348 LDHAL6AQ6ZMR3 332 aa27.17■■□□□ 1.94
CROCCP3-206ENST00000591348 SYT17Q9BSW7 474 aa27.17■■□□□ 1.94
CROCCP3-206ENST00000591348 PIM2Q9P1W9 311 aa27.17■■□□□ 1.94
CROCCP3-206ENST00000591348 GOLGB1Q14789 3259 aaKnown RBP27.17■■□□□ 1.94
CROCCP3-206ENST00000591348 TTLL6Q8N841 843 aa27.17■■□□□ 1.94
CROCCP3-206ENST00000591348 SIL1Q9H173 461 aa27.17■■□□□ 1.94
CROCCP3-206ENST00000591348 HDAC1Q13547 482 aaPredicted RBP27.16■■□□□ 1.94
CROCCP3-206ENST00000591348 RWDD1Q9H446 243 aaPredicted RBP27.16■■□□□ 1.94
CROCCP3-206ENST00000591348 COL4A1P02462 1669 aa27.16■■□□□ 1.94
CROCCP3-206ENST00000591348 SURF6O75683 361 aaKnown RBP27.15■■□□□ 1.94
CROCCP3-206ENST00000591348 PRPF40BQ6NWY9 871 aaKnown RBP27.15■■□□□ 1.94
CROCCP3-206ENST00000591348 CNNM1Q9NRU3 951 aa27.15■■□□□ 1.94
CROCCP3-206ENST00000591348 BSDC1Q9NW68 430 aaPredicted RBP27.15■■□□□ 1.94
CROCCP3-206ENST00000591348 PPEF1O14829 653 aaPredicted RBP27.14■■□□□ 1.94
CROCCP3-206ENST00000591348 TMC4Q7Z404 712 aa27.14■■□□□ 1.93
CROCCP3-206ENST00000591348 FBXO3Q9UK99 471 aa27.14■■□□□ 1.93
CROCCP3-206ENST00000591348 EYA2O00167 538 aa27.13■■□□□ 1.93
CROCCP3-206ENST00000591348 G3BP1Q13283 466 aaKnown RBP eCLIP27.13■■□□□ 1.93
CROCCP3-206ENST00000591348 OS9Q13438 667 aaPredicted RBP27.13■■□□□ 1.93
CROCCP3-206ENST00000591348 WWC3Q9ULE0 1092 aa27.13■■□□□ 1.93
CROCCP3-206ENST00000591348 NOP58Q9Y2X3 529 aaKnown RBP27.13■■□□□ 1.93
CROCCP3-206ENST00000591348 CACNA1SQ13698 1873 aa27.12■■□□□ 1.93
CROCCP3-206ENST00000591348 SPEF2Q9C093 1822 aa27.12■■□□□ 1.93
CROCCP3-206ENST00000591348 LRRC24Q50LG9 513 aa27.12■■□□□ 1.93
CROCCP3-206ENST00000591348 PUS3Q9BZE2 481 aaKnown RBP27.12■■□□□ 1.93
CROCCP3-206ENST00000591348 EXOC6BQ9Y2D4 811 aa27.12■■□□□ 1.93
CROCCP3-206ENST00000591348 DALRD3Q5D0E6 543 aaKnown RBP27.11■■□□□ 1.93
CROCCP3-206ENST00000591348 PPP4R2Q9NY27 417 aa27.11■■□□□ 1.93
CROCCP3-206ENST00000591348 CIAO1O76071 339 aa27.11■■□□□ 1.93
CROCCP3-206ENST00000591348 HSP90AB4PQ58FF6 505 aa27.11■■□□□ 1.93
CROCCP3-206ENST00000591348 CCDC136Q96JN2 1154 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms