RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 KLHL40Q2TBA0 621 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 DBNDD2Q9BQY9 259 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
GFAP-216ENST00000589701 SCN11AQ9UI33 1791 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 AOX1Q06278 1338 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 SYCE3A1L190 88 aa13.18□□□□□ -0.3
GFAP-216ENST00000589701 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
GFAP-216ENST00000589701 RGS22Q8NE09 1264 aa13.18□□□□□ -0.3
GFAP-216ENST00000589701 A0A0G2JS52 829 aa13.18□□□□□ -0.3
GFAP-216ENST00000589701 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
GFAP-216ENST00000589701 TIMM10P62072 90 aa13.18□□□□□ -0.3
GFAP-216ENST00000589701 PTPN12Q05209 780 aaKnown RBP13.18□□□□□ -0.3
GFAP-216ENST00000589701 SYNE4Q8N205 404 aa13.18□□□□□ -0.3
GFAP-216ENST00000589701 RNF214Q8ND24 703 aa13.18□□□□□ -0.3
GFAP-216ENST00000589701 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
GFAP-216ENST00000589701 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
GFAP-216ENST00000589701 ERBB4Q15303 1308 aa13.18□□□□□ -0.3
GFAP-216ENST00000589701 COL18A1P39060 1754 aa13.17□□□□□ -0.3
GFAP-216ENST00000589701 ANAPC15P60006 121 aa13.17□□□□□ -0.3
GFAP-216ENST00000589701 CUL4AQ13619 759 aa13.17□□□□□ -0.3
GFAP-216ENST00000589701 NEUROD6Q96NK8 337 aa13.17□□□□□ -0.3
GFAP-216ENST00000589701 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
GFAP-216ENST00000589701 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
GFAP-216ENST00000589701 EVA1CP58658 441 aa13.17□□□□□ -0.3
GFAP-216ENST00000589701 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
GFAP-216ENST00000589701 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
GFAP-216ENST00000589701 TTC14Q96N46 770 aa13.17□□□□□ -0.3
GFAP-216ENST00000589701 BRD1O95696 1058 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 STK3Q13188 491 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
GFAP-216ENST00000589701 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 FNBP4Q8N3X1 1017 aaPredicted RBP13.16□□□□□ -0.3
GFAP-216ENST00000589701 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 EVI5LQ96CN4 794 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 USP21Q9UK80 565 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
GFAP-216ENST00000589701 UTYO14607 1347 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 RFX5P48382 616 aaPredicted RBP13.16□□□□□ -0.3
GFAP-216ENST00000589701 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 ERC1Q8IUD2 1116 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 MPNDQ8N594 471 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 RBSNQ9H1K0 784 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
GFAP-216ENST00000589701 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
GFAP-216ENST00000589701 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.3
GFAP-216ENST00000589701 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
GFAP-216ENST00000589701 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.3
GFAP-216ENST00000589701 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
GFAP-216ENST00000589701 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.31
GFAP-216ENST00000589701 ST3GAL1Q11201 340 aa13.15□□□□□ -0.31
GFAP-216ENST00000589701 TNNI3KQ59H18 835 aa13.15□□□□□ -0.31
GFAP-216ENST00000589701 CREB3L3Q68CJ9 461 aa13.15□□□□□ -0.31
GFAP-216ENST00000589701 SYTL4Q96C24 671 aaPredicted RBP13.15□□□□□ -0.31
GFAP-216ENST00000589701 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.31
GFAP-216ENST00000589701 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.31
GFAP-216ENST00000589701 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
GFAP-216ENST00000589701 COL15A1P39059 1388 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 ZBTB22O15209 634 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 ME3Q16798 604 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 CRYBG1Q9Y4K1 1723 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 WDR17Q8IZU2 1322 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 SYT1P21579 422 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 NECTIN1Q15223 517 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
GFAP-216ENST00000589701 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
GFAP-216ENST00000589701 ATRNO75882 1429 aa13.14□□□□□ -0.31
GFAP-216ENST00000589701 FIBPO43427 364 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 TPM2P07951 284 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 ARID3AQ99856 593 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 AFDNP55196 1824 aaKnown RBP13.13□□□□□ -0.31
GFAP-216ENST00000589701 SLC27A2O14975 620 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 GPTP24298 496 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 MCM2P49736 904 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
GFAP-216ENST00000589701 VPS37CA5D8V6 355 aaPredicted RBP13.12□□□□□ -0.31
GFAP-216ENST00000589701 IL2RBP14784 551 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 GJB2P29033 226 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 FOXO4P98177 505 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 RUFY2Q8WXA3 655 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 ANP32BQ92688 251 aaKnown RBP13.12□□□□□ -0.31
GFAP-216ENST00000589701 EP400Q96L91 3159 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 GOLIM4O00461 696 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 FOSBP53539 338 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 CASP7P55210 303 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 VPS53Q5VIR6 699 aa13.12□□□□□ -0.31
GFAP-216ENST00000589701 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
GFAP-216ENST00000589701 SMC3Q9UQE7 1217 aa13.11□□□□□ -0.31
GFAP-216ENST00000589701 CYP46A1Q9Y6A2 500 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms