RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 PPFIA3O75145 1194 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 HOXB7P09629 217 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 NMIQ13287 307 aaPredicted RBP18■□□□□ 0.47
PTPRS-206ENST00000588552 WTAPQ15007 396 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 MATR3P43243 847 aaKnown RBP eCLIP18■□□□□ 0.473e-9■■■□□ 18.4
PTPRS-206ENST00000588552 TEX35Q5T0J7 233 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 ANO10Q9NW15 660 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 KLF18A0A0U1RQI7 1052 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 F8W031 263 aaPredicted RBP18■□□□□ 0.47
PTPRS-206ENST00000588552 IL27Q8NEV9 243 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 TNNT3P45378 269 aaPredicted RBP17.99■□□□□ 0.47
PTPRS-206ENST00000588552 TFIP11Q9UBB9 837 aaKnown RBP17.99■□□□□ 0.47
PTPRS-206ENST00000588552 STX8Q9UNK0 236 aa17.99■□□□□ 0.47
PTPRS-206ENST00000588552 CFAP100Q494V2 611 aa17.99■□□□□ 0.47
PTPRS-206ENST00000588552 TMX3Q96JJ7 454 aa17.99■□□□□ 0.47
PTPRS-206ENST00000588552 CNNM2Q9H8M5 875 aa17.99■□□□□ 0.47
PTPRS-206ENST00000588552 PARP3Q9Y6F1 533 aa17.99■□□□□ 0.47
PTPRS-206ENST00000588552 EIF5P55010 431 aaKnown RBP17.99■□□□□ 0.47
PTPRS-206ENST00000588552 TXLNBQ8N3L3 684 aa17.99■□□□□ 0.47
PTPRS-206ENST00000588552 ESR2Q92731 530 aa17.99■□□□□ 0.47
PTPRS-206ENST00000588552 TTC37Q6PGP7 1564 aa17.99■□□□□ 0.47
PTPRS-206ENST00000588552 ANAPC15P60006 121 aa17.98■□□□□ 0.47
PTPRS-206ENST00000588552 HSP90B2PQ58FF3 399 aa17.98■□□□□ 0.47
PTPRS-206ENST00000588552 ZBTB7BO15156 539 aaPredicted RBP17.98■□□□□ 0.47
PTPRS-206ENST00000588552 RDXP35241 583 aaKnown RBP17.98■□□□□ 0.47
PTPRS-206ENST00000588552 TRAPPC3LQ5T215 181 aa17.98■□□□□ 0.47
PTPRS-206ENST00000588552 LRRC2Q9BYS8 371 aa17.98■□□□□ 0.47
PTPRS-206ENST00000588552 EHMT1Q9H9B1 1298 aa17.98■□□□□ 0.47
PTPRS-206ENST00000588552 TSPY3P0CV98 308 aa17.98■□□□□ 0.47
PTPRS-206ENST00000588552 TSPY8P0CW00 308 aa17.98■□□□□ 0.47
PTPRS-206ENST00000588552 CDR1P51861 262 aa17.98■□□□□ 0.47
PTPRS-206ENST00000588552 METTL22Q9BUU2 404 aaPredicted RBP17.98■□□□□ 0.47
PTPRS-206ENST00000588552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.98■□□□□ 0.472e-7■■■■■ 265.2
PTPRS-206ENST00000588552 FSIP1Q8NA03 581 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 TCEANC2Q96MN5 208 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 NSFL1CQ9UNZ2 370 aaKnown RBP17.97■□□□□ 0.47
PTPRS-206ENST00000588552 KLHL10Q6JEL2 608 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 NECAB1Q8N987 351 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 GDPD2Q9HCC8 539 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
PTPRS-206ENST00000588552 SMC5Q8IY18 1101 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 KAT6BQ8WYB5 2073 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
PTPRS-206ENST00000588552 WDR78Q5VTH9 848 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 CNNM3Q8NE01 707 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 FAM89AQ96GI7 184 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 CHD1O14646 1710 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 ZBTB43O43298 467 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 TMTC2Q8N394 836 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 MYO6Q9UM54 1294 aa17.97■□□□□ 0.47
PTPRS-206ENST00000588552 CTAGE5O15320 804 aa17.96■□□□□ 0.47
PTPRS-206ENST00000588552 CCNL1Q9UK58 526 aaPredicted RBP17.96■□□□□ 0.47
PTPRS-206ENST00000588552 MAGEB6P1A0A0J9YX57 407 aa17.96■□□□□ 0.47
PTPRS-206ENST00000588552 ZC3H12CQ9C0D7 883 aaKnown RBP17.96■□□□□ 0.47
PTPRS-206ENST00000588552 ANKRD2Q9GZV1 360 aa17.96■□□□□ 0.47
PTPRS-206ENST00000588552 HDAC9Q9UKV0 1011 aa17.96■□□□□ 0.47
PTPRS-206ENST00000588552 EFCAB6Q5THR3 1501 aa17.96■□□□□ 0.47
PTPRS-206ENST00000588552 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
PTPRS-206ENST00000588552 KDM5DQ9BY66 1539 aa17.95■□□□□ 0.46
PTPRS-206ENST00000588552 PPP1R12BO60237 982 aaPredicted RBP17.95■□□□□ 0.46
PTPRS-206ENST00000588552 BAG4O95429 457 aaKnown RBP17.95■□□□□ 0.46
PTPRS-206ENST00000588552 CCDC178Q5BJE1 867 aa17.95■□□□□ 0.46
PTPRS-206ENST00000588552 PLEKHM2Q8IWE5 1019 aa17.95■□□□□ 0.46
PTPRS-206ENST00000588552 SEPT11Q9NVA2 429 aaKnown RBP17.95■□□□□ 0.46
PTPRS-206ENST00000588552 MLH3Q9UHC1 1453 aa17.95■□□□□ 0.46
PTPRS-206ENST00000588552 ZCCHC11Q5TAX3 1644 aaKnown RBP17.95■□□□□ 0.46
PTPRS-206ENST00000588552 FAM177A1Q8N128 213 aaPredicted RBP17.95■□□□□ 0.46
PTPRS-206ENST00000588552 OGFOD1Q8N543 542 aa17.95■□□□□ 0.46
PTPRS-206ENST00000588552 ERCC4Q92889 916 aaPredicted RBP17.95■□□□□ 0.46
PTPRS-206ENST00000588552 DDX19AQ9NUU7 478 aaKnown RBP17.95■□□□□ 0.46
PTPRS-206ENST00000588552 ZMYM4Q5VZL5 1548 aa17.95■□□□□ 0.46
PTPRS-206ENST00000588552 KDM5AP29375 1690 aaKnown RBP17.95■□□□□ 0.46
PTPRS-206ENST00000588552 PICALMQ13492 652 aa17.94■□□□□ 0.46
PTPRS-206ENST00000588552 CKAP2LQ8IYA6 745 aa17.94■□□□□ 0.46
PTPRS-206ENST00000588552 PRIM1P49642 420 aaKnown RBP17.94■□□□□ 0.46
PTPRS-206ENST00000588552 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
PTPRS-206ENST00000588552 PARP10Q53GL7 1025 aa17.94■□□□□ 0.46
PTPRS-206ENST00000588552 Q6ZUG5 572 aa17.94■□□□□ 0.46
PTPRS-206ENST00000588552 CCDC191Q8NCU4 936 aa17.94■□□□□ 0.46
PTPRS-206ENST00000588552 TSG101Q99816 390 aa17.94■□□□□ 0.46
PTPRS-206ENST00000588552 USP19O94966 1318 aa17.94■□□□□ 0.46
PTPRS-206ENST00000588552 GNAT2P19087 354 aa17.93■□□□□ 0.46
PTPRS-206ENST00000588552 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
PTPRS-206ENST00000588552 TCP11L1Q9NUJ3 509 aa17.93■□□□□ 0.46
PTPRS-206ENST00000588552 METP08581 1390 aa17.93■□□□□ 0.46
PTPRS-206ENST00000588552 PLEKHG1Q9ULL1 1385 aa17.93■□□□□ 0.46
PTPRS-206ENST00000588552 MAGI2Q86UL8 1455 aa17.93■□□□□ 0.46
PTPRS-206ENST00000588552 A1BGP04217 495 aa17.93■□□□□ 0.46
PTPRS-206ENST00000588552 ZSCAN16Q9H4T2 348 aaPredicted RBP17.93■□□□□ 0.46
PTPRS-206ENST00000588552 ZNF771Q7L3S4 317 aaPredicted RBP17.93■□□□□ 0.46
PTPRS-206ENST00000588552 UBA5Q9GZZ9 404 aa17.93■□□□□ 0.46
PTPRS-206ENST00000588552 RTN1Q16799 776 aa17.92■□□□□ 0.46
PTPRS-206ENST00000588552 SH3TC1Q8TE82 1336 aa17.92■□□□□ 0.46
PTPRS-206ENST00000588552 C8orf34Q49A92 452 aa17.92■□□□□ 0.46
PTPRS-206ENST00000588552 CCDC181Q5TID7 509 aa17.92■□□□□ 0.46
PTPRS-206ENST00000588552 MIGA1Q8NAN2 632 aa17.92■□□□□ 0.46
PTPRS-206ENST00000588552 EPB41L2O43491 1005 aaKnown RBP17.92■□□□□ 0.46
PTPRS-206ENST00000588552 ITGA6P23229 1130 aa17.92■□□□□ 0.46
PTPRS-206ENST00000588552 PPP4R3AQ6IN85 833 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms