RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 FBXW7Q969H0 707 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 TNMDQ9H2S6 317 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.4■□□□□ 0.54
TPGS1-202ENST00000588278 MORC2Q9Y6X9 1032 aaPredicted RBP18.4■□□□□ 0.54
TPGS1-202ENST00000588278 TPM3P06753 285 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 KSR2Q6VAB6 950 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 KRT222Q8N1A0 295 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 JAKMIP1Q96N16 626 aaKnown RBP18.4■□□□□ 0.54
TPGS1-202ENST00000588278 NDUFB9Q9Y6M9 179 aa18.4■□□□□ 0.54
TPGS1-202ENST00000588278 ZNF75DP51815 510 aa18.39■□□□□ 0.53
TPGS1-202ENST00000588278 ST3GAL1Q11201 340 aa18.39■□□□□ 0.53
TPGS1-202ENST00000588278 G3BP1Q13283 466 aaKnown RBP eCLIP18.39■□□□□ 0.53
TPGS1-202ENST00000588278 HSP90AB4PQ58FF6 505 aa18.39■□□□□ 0.53
TPGS1-202ENST00000588278 GTF3C6Q969F1 213 aa18.39■□□□□ 0.53
TPGS1-202ENST00000588278 TLR7Q9NYK1 1049 aaKnown RBP18.39■□□□□ 0.53
TPGS1-202ENST00000588278 GLRX3O76003 335 aaKnown RBP18.38■□□□□ 0.53
TPGS1-202ENST00000588278 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
TPGS1-202ENST00000588278 TAF3Q5VWG9 929 aa18.38■□□□□ 0.53
TPGS1-202ENST00000588278 ATP6V1DQ9Y5K8 247 aa18.38■□□□□ 0.53
TPGS1-202ENST00000588278 PXDNQ92626 1479 aa18.38■□□□□ 0.53
TPGS1-202ENST00000588278 FILIP1Q7Z7B0 1213 aa18.38■□□□□ 0.53
TPGS1-202ENST00000588278 EDC3Q96F86 508 aaKnown RBP18.38■□□□□ 0.53
TPGS1-202ENST00000588278 FAM227BQ96M60 508 aa18.38■□□□□ 0.53
TPGS1-202ENST00000588278 ECHDC1Q9NTX5 307 aa18.38■□□□□ 0.53
TPGS1-202ENST00000588278 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
TPGS1-202ENST00000588278 RAD50Q92878 1312 aa18.37■□□□□ 0.53
TPGS1-202ENST00000588278 LRRN4CLQ8ND94 238 aa18.37■□□□□ 0.53
TPGS1-202ENST00000588278 MYD88Q99836 296 aa18.37■□□□□ 0.53
TPGS1-202ENST00000588278 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
TPGS1-202ENST00000588278 GRM8O00222 908 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 ATP5J2-PTCD1G3V325 749 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
TPGS1-202ENST00000588278 CAPN2P17655 700 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 ME3Q16798 604 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 COPS6Q7L5N1 327 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 GPATCH3Q96I76 525 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 ZNF165P49910 485 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 CERS3Q8IU89 383 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 XAGE3Q8WTP9 111 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 ZBTB9Q96C00 473 aa18.36■□□□□ 0.53
TPGS1-202ENST00000588278 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
TPGS1-202ENST00000588278 GOLGA6L4A6NEF3 574 aa18.35■□□□□ 0.53
TPGS1-202ENST00000588278 NR1I2O75469 434 aa18.35■□□□□ 0.53
TPGS1-202ENST00000588278 DDX58O95786 925 aaKnown RBP18.35■□□□□ 0.53
TPGS1-202ENST00000588278 LARP1BQ659C4 914 aaKnown RBP18.35■□□□□ 0.53
TPGS1-202ENST00000588278 ZNF446Q9NWS9 450 aa18.35■□□□□ 0.53
TPGS1-202ENST00000588278 FAM208AQ9UK61 1670 aaKnown RBP18.35■□□□□ 0.53
TPGS1-202ENST00000588278 HOXB7P09629 217 aa18.35■□□□□ 0.53
TPGS1-202ENST00000588278 TIGD1Q96MW7 591 aa18.35■□□□□ 0.53
TPGS1-202ENST00000588278 CEBPZQ03701 1054 aaKnown RBP18.34■□□□□ 0.53
TPGS1-202ENST00000588278 PLA2G4DQ86XP0 818 aa18.34■□□□□ 0.53
TPGS1-202ENST00000588278 ERCC4Q92889 916 aaPredicted RBP18.34■□□□□ 0.53
TPGS1-202ENST00000588278 FSD1Q9BTV5 496 aa18.34■□□□□ 0.53
TPGS1-202ENST00000588278 PDRG1Q9NUG6 133 aa18.34■□□□□ 0.53
TPGS1-202ENST00000588278 XRN1Q8IZH2 1706 aaKnown RBP18.34■□□□□ 0.53
TPGS1-202ENST00000588278 STK3Q13188 491 aa18.34■□□□□ 0.53
TPGS1-202ENST00000588278 ZNF397Q8NF99 534 aaPredicted RBP18.34■□□□□ 0.53
TPGS1-202ENST00000588278 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
TPGS1-202ENST00000588278 SASH1O94885 1247 aa18.33■□□□□ 0.53
TPGS1-202ENST00000588278 NEXNQ0ZGT2 675 aa18.33■□□□□ 0.53
TPGS1-202ENST00000588278 ZNF790Q6PG37 636 aa18.33■□□□□ 0.53
TPGS1-202ENST00000588278 LINS1Q8NG48 757 aa18.33■□□□□ 0.52
TPGS1-202ENST00000588278 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
TPGS1-202ENST00000588278 AOX1Q06278 1338 aa18.33■□□□□ 0.52
TPGS1-202ENST00000588278 KRT85P78386 507 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 PTPN14Q15678 1187 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 KAZALD1Q96I82 304 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
TPGS1-202ENST00000588278 CCDC66A2RUB6 948 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 LTN1O94822 1766 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 CHGBP05060 677 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 SKILP12757 684 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 ERBB3P21860 1342 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 FOSBP53539 338 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 NMIQ13287 307 aaPredicted RBP18.32■□□□□ 0.52
TPGS1-202ENST00000588278 DDX11Q96FC9 970 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 IGKV5-2P06315 115 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 ERCC6LQ2NKX8 1250 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 EPHA10Q5JZY3 1008 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
TPGS1-202ENST00000588278 TPCN1Q9ULQ1 816 aa18.32■□□□□ 0.52
TPGS1-202ENST00000588278 ZNF330Q9Y3S2 320 aaPredicted RBP18.32■□□□□ 0.52
TPGS1-202ENST00000588278 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
TPGS1-202ENST00000588278 RGPD2P0DJD1 1756 aa18.31■□□□□ 0.52
TPGS1-202ENST00000588278 ALDH1L1O75891 902 aa18.31■□□□□ 0.52
TPGS1-202ENST00000588278 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
TPGS1-202ENST00000588278 LRRC8AQ8IWT6 810 aa18.31■□□□□ 0.52
TPGS1-202ENST00000588278 IPO4Q8TEX9 1081 aaKnown RBP18.31■□□□□ 0.52
TPGS1-202ENST00000588278 SPATA32Q96LK8 384 aa18.31■□□□□ 0.52
TPGS1-202ENST00000588278 RBM8AQ9Y5S9 174 aaKnown RBP18.31■□□□□ 0.52
TPGS1-202ENST00000588278 SYCP1Q15431 976 aa18.3■□□□□ 0.52
TPGS1-202ENST00000588278 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
TPGS1-202ENST00000588278 C11orf57Q6ZUT1 292 aaPredicted RBP18.3■□□□□ 0.52
TPGS1-202ENST00000588278 DNAJC2Q99543 621 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms