RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 G3BP1Q13283 466 aaKnown RBP eCLIP19.77■□□□□ 0.76
SSC5D-203ENST00000588254 Q6ZUG5 572 aa19.77■□□□□ 0.76
SSC5D-203ENST00000588254 GOLPH3LQ9H4A5 285 aa19.77■□□□□ 0.76
SSC5D-203ENST00000588254 PEAK1Q9H792 1746 aa19.77■□□□□ 0.75
SSC5D-203ENST00000588254 OTUD7BQ6GQQ9 843 aa19.77■□□□□ 0.75
SSC5D-203ENST00000588254 PAXBP1Q9Y5B6 917 aa19.77■□□□□ 0.75
SSC5D-203ENST00000588254 MAP4K1Q92918 833 aa19.76■□□□□ 0.75
SSC5D-203ENST00000588254 IL17RAQ96F46 866 aa19.76■□□□□ 0.75
SSC5D-203ENST00000588254 CDK11BP21127 795 aaKnown RBP19.76■□□□□ 0.75
SSC5D-203ENST00000588254 SYT10Q6XYQ8 523 aa19.76■□□□□ 0.75
SSC5D-203ENST00000588254 KRT222Q8N1A0 295 aa19.76■□□□□ 0.75
SSC5D-203ENST00000588254 BICC1Q9H694 974 aaKnown RBP19.76■□□□□ 0.75
SSC5D-203ENST00000588254 SASH1O94885 1247 aa19.75■□□□□ 0.75
SSC5D-203ENST00000588254 HSP90AB4PQ58FF6 505 aa19.75■□□□□ 0.75
SSC5D-203ENST00000588254 IGSF1Q8N6C5 1336 aa19.75■□□□□ 0.75
SSC5D-203ENST00000588254 POLR3GO15318 223 aaPredicted RBP19.75■□□□□ 0.75
SSC5D-203ENST00000588254 ABTB2Q8N961 1025 aa19.75■□□□□ 0.75
SSC5D-203ENST00000588254 TTC41PQ6P2S7 1318 aa19.75■□□□□ 0.75
SSC5D-203ENST00000588254 HSP90AA4PQ58FG1 418 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 RNF20Q5VTR2 975 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 LRRC59Q96AG4 307 aaKnown RBP19.74■□□□□ 0.75
SSC5D-203ENST00000588254 SUCLG2Q96I99 432 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 ARHGEF10O15013 1369 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 MAP3K5Q99683 1374 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 GOLGA8FQ08AF8 430 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 GOLGA8DPQ0D2H9 430 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 SDF4Q9BRK5 362 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 BTBD11A6QL63 1104 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 USP6P35125 1406 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 TERF2Q15554 542 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 EPC1Q9H2F5 836 aa19.74■□□□□ 0.75
SSC5D-203ENST00000588254 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 A0A1B0GVL5 298 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 KINO60870 393 aaKnown RBP19.73■□□□□ 0.75
SSC5D-203ENST00000588254 MYL6BP14649 208 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 GTF2E1P29083 439 aaPredicted RBP19.73■□□□□ 0.75
SSC5D-203ENST00000588254 HOXC9P31274 260 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 RBM6P78332 1123 aaKnown RBP19.73■□□□□ 0.75
SSC5D-203ENST00000588254 CCDC73Q6ZRK6 1079 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 DDX46Q7L014 1031 aaKnown RBP19.73■□□□□ 0.75
SSC5D-203ENST00000588254 HOMER1Q86YM7 354 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 ZNF397Q8NF99 534 aaPredicted RBP19.73■□□□□ 0.75
SSC5D-203ENST00000588254 ZFP91Q96JP5 570 aaPredicted RBP19.73■□□□□ 0.75
SSC5D-203ENST00000588254 USP28Q96RU2 1077 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 TM6SF1Q9BZW5 370 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 TUBGCP6Q96RT7 1819 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 IQCB1Q15051 598 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 FSIP1Q8NA03 581 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 ELP1O95163 1332 aa19.73■□□□□ 0.75
SSC5D-203ENST00000588254 EIF4A1P60842 406 aaKnown RBP19.72■□□□□ 0.75
SSC5D-203ENST00000588254 APOBRQ0VD83 1088 aa19.72■□□□□ 0.75
SSC5D-203ENST00000588254 TMC6Q7Z403 805 aa19.72■□□□□ 0.75
SSC5D-203ENST00000588254 RESTQ13127 1097 aa19.71■□□□□ 0.75
SSC5D-203ENST00000588254 POLR3DP05423 398 aaPredicted RBP19.71■□□□□ 0.75
SSC5D-203ENST00000588254 CCZ1BP86790 482 aa19.71■□□□□ 0.75
SSC5D-203ENST00000588254 CCZ1P86791 482 aaPredicted RBP19.71■□□□□ 0.75
SSC5D-203ENST00000588254 SCRN1Q12765 414 aa19.71■□□□□ 0.75
SSC5D-203ENST00000588254 ZRSR1Q15695 479 aaKnown RBP19.71■□□□□ 0.75
SSC5D-203ENST00000588254 GJB4Q9NTQ9 266 aa19.71■□□□□ 0.75
SSC5D-203ENST00000588254 SBNO1A3KN83 1393 aa19.7■□□□□ 0.74
SSC5D-203ENST00000588254 PLCD3Q8N3E9 789 aa19.7■□□□□ 0.74
SSC5D-203ENST00000588254 NEK1Q96PY6 1258 aa19.7■□□□□ 0.74
SSC5D-203ENST00000588254 ZNF446Q9NWS9 450 aa19.7■□□□□ 0.74
SSC5D-203ENST00000588254 ADCY9O60503 1353 aa19.7■□□□□ 0.74
SSC5D-203ENST00000588254 SNW1Q13573 536 aaKnown RBP19.7■□□□□ 0.74
SSC5D-203ENST00000588254 STX1AQ16623 288 aa19.7■□□□□ 0.74
SSC5D-203ENST00000588254 LMOD2Q6P5Q4 547 aa19.7■□□□□ 0.74
SSC5D-203ENST00000588254 CCAR2Q8N163 923 aaKnown RBP19.7■□□□□ 0.74
SSC5D-203ENST00000588254 IFNKQ9P0W0 207 aa19.7■□□□□ 0.74
SSC5D-203ENST00000588254 MORC2Q9Y6X9 1032 aaPredicted RBP19.7■□□□□ 0.74
SSC5D-203ENST00000588254 EPB41L2O43491 1005 aaKnown RBP19.69■□□□□ 0.74
SSC5D-203ENST00000588254 STK11IPQ8N1F8 1099 aa19.69■□□□□ 0.74
SSC5D-203ENST00000588254 SLU7O95391 586 aaKnown RBP19.69■□□□□ 0.74
SSC5D-203ENST00000588254 ANKRD1Q15327 319 aa19.69■□□□□ 0.74
SSC5D-203ENST00000588254 ZNF530Q6P9A1 599 aaPredicted RBP19.69■□□□□ 0.74
SSC5D-203ENST00000588254 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
SSC5D-203ENST00000588254 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
SSC5D-203ENST00000588254 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
SSC5D-203ENST00000588254 LMOD1P29536 600 aaPredicted RBP19.68■□□□□ 0.74
SSC5D-203ENST00000588254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.68■□□□□ 0.74
SSC5D-203ENST00000588254 DHX40Q8IX18 779 aaKnown RBP19.68■□□□□ 0.74
SSC5D-203ENST00000588254 TMEM51Q9NW97 253 aa19.68■□□□□ 0.74
SSC5D-203ENST00000588254 TSPOAP1O95153 1857 aa19.68■□□□□ 0.74
SSC5D-203ENST00000588254 GABPB1Q06547 395 aaPredicted RBP19.68■□□□□ 0.74
SSC5D-203ENST00000588254 DPCR1Q3MIW9 517 aa19.68■□□□□ 0.74
SSC5D-203ENST00000588254 C3P01024 1663 aa19.68■□□□□ 0.74
SSC5D-203ENST00000588254 SEC31AO94979 1220 aaKnown RBP19.67■□□□□ 0.74
SSC5D-203ENST00000588254 LTKP29376 864 aa19.67■□□□□ 0.74
SSC5D-203ENST00000588254 SF3A1Q15459 793 aaKnown RBP19.67■□□□□ 0.74
SSC5D-203ENST00000588254 ARHGAP29Q52LW3 1261 aa19.67■□□□□ 0.74
SSC5D-203ENST00000588254 XRN1Q8IZH2 1706 aaKnown RBP19.67■□□□□ 0.74
SSC5D-203ENST00000588254 CYP21A2P08686 494 aa19.67■□□□□ 0.74
SSC5D-203ENST00000588254 NBPF6Q5VWK0 638 aa19.67■□□□□ 0.74
SSC5D-203ENST00000588254 NBPF4Q96M43 638 aa19.67■□□□□ 0.74
SSC5D-203ENST00000588254 XPO4Q9C0E2 1151 aaKnown RBP19.67■□□□□ 0.74
SSC5D-203ENST00000588254 GPHNQ9NQX3 736 aaPredicted RBP19.67■□□□□ 0.74
SSC5D-203ENST00000588254 PTPDC1A2A3K4 754 aa19.67■□□□□ 0.74
SSC5D-203ENST00000588254 TAF5LO75529 589 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms