RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 CC2D2BQ6DHV5 1058 aa16.67■□□□□ 0.26
CNN1-205ENST00000586577 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
CNN1-205ENST00000586577 AOC2O75106 756 aa16.66■□□□□ 0.26
CNN1-205ENST00000586577 GRIPAP1Q4V328 841 aa16.66■□□□□ 0.26
CNN1-205ENST00000586577 CST9Q5W186 159 aa16.66■□□□□ 0.26
CNN1-205ENST00000586577 NUTM1Q86Y26 1132 aa16.66■□□□□ 0.26
CNN1-205ENST00000586577 HHIPL1Q96JK4 782 aa16.66■□□□□ 0.26
CNN1-205ENST00000586577 TNRC18O15417 2968 aaPredicted RBP16.65■□□□□ 0.26
CNN1-205ENST00000586577 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
CNN1-205ENST00000586577 SUSD4Q5VX71 490 aa16.65■□□□□ 0.26
CNN1-205ENST00000586577 IL16Q14005 1332 aa16.65■□□□□ 0.26
CNN1-205ENST00000586577 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
CNN1-205ENST00000586577 LTBP1Q14766 1721 aa16.65■□□□□ 0.26
CNN1-205ENST00000586577 NTSR2O95665 410 aa16.64■□□□□ 0.25
CNN1-205ENST00000586577 EPS15P42566 896 aa16.64■□□□□ 0.25
CNN1-205ENST00000586577 OLFM4Q6UX06 510 aa16.64■□□□□ 0.25
CNN1-205ENST00000586577 SAPCD2Q86UD0 394 aa16.64■□□□□ 0.25
CNN1-205ENST00000586577 PHAXQ9H814 394 aaKnown RBP16.64■□□□□ 0.25
CNN1-205ENST00000586577 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
CNN1-205ENST00000586577 LAMB2P55268 1798 aa16.64■□□□□ 0.25
CNN1-205ENST00000586577 TRAF5O00463 557 aa16.63■□□□□ 0.25
CNN1-205ENST00000586577 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
CNN1-205ENST00000586577 SCNN1DP51172 638 aa16.63■□□□□ 0.25
CNN1-205ENST00000586577 FMR1Q06787 632 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNN1-205ENST00000586577 LARGE2Q8N3Y3 721 aa16.63■□□□□ 0.25
CNN1-205ENST00000586577 ZNF428Q96B54 188 aa16.63■□□□□ 0.25
CNN1-205ENST00000586577 ZNF521Q96K83 1311 aa16.63■□□□□ 0.25
CNN1-205ENST00000586577 IBTKQ9P2D0 1353 aaPredicted RBP16.63■□□□□ 0.25
CNN1-205ENST00000586577 CELF2O95319 508 aaKnown RBP16.62■□□□□ 0.25
CNN1-205ENST00000586577 C3orf67Q6ZVT6 689 aa16.62■□□□□ 0.25
CNN1-205ENST00000586577 WDR63Q8IWG1 891 aa16.62■□□□□ 0.25
CNN1-205ENST00000586577 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
CNN1-205ENST00000586577 NIM1KQ8IY84 436 aa16.61■□□□□ 0.25
CNN1-205ENST00000586577 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
CNN1-205ENST00000586577 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
CNN1-205ENST00000586577 NOGQ13253 232 aa16.6■□□□□ 0.25
CNN1-205ENST00000586577 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
CNN1-205ENST00000586577 PRPF38BQ5VTL8 546 aaKnown RBP16.6■□□□□ 0.25
CNN1-205ENST00000586577 SLC51AQ86UW1 340 aa16.6■□□□□ 0.25
CNN1-205ENST00000586577 NLRP10Q86W26 655 aa16.6■□□□□ 0.25
CNN1-205ENST00000586577 NYXQ9GZU5 481 aa16.6■□□□□ 0.25
CNN1-205ENST00000586577 TMX4Q9H1E5 349 aaPredicted RBP16.6■□□□□ 0.25
CNN1-205ENST00000586577 HYPKQ9NX55 129 aa16.6■□□□□ 0.25
CNN1-205ENST00000586577 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
CNN1-205ENST00000586577 TWISTNBQ3B726 338 aaPredicted RBP16.59■□□□□ 0.25
CNN1-205ENST00000586577 CIAPIN1Q6FI81 312 aa16.59■□□□□ 0.25
CNN1-205ENST00000586577 ANKRD13DQ6ZTN6 518 aa16.59■□□□□ 0.25
CNN1-205ENST00000586577 PLBD2Q8NHP8 589 aa16.59■□□□□ 0.25
CNN1-205ENST00000586577 EXOSC9Q06265 439 aaKnown RBP16.58■□□□□ 0.24
CNN1-205ENST00000586577 CRY2Q49AN0 593 aa16.58■□□□□ 0.24
CNN1-205ENST00000586577 G2E3Q7L622 706 aa16.58■□□□□ 0.24
CNN1-205ENST00000586577 MIER1Q8N108 512 aa16.58■□□□□ 0.24
CNN1-205ENST00000586577 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
CNN1-205ENST00000586577 ISCA1Q9BUE6 129 aa16.58■□□□□ 0.24
CNN1-205ENST00000586577 TAF1P21675 1872 aa16.57■□□□□ 0.24
CNN1-205ENST00000586577 COL4A1P02462 1669 aa16.57■□□□□ 0.24
CNN1-205ENST00000586577 SNED1Q8TER0 1413 aa16.57■□□□□ 0.24
CNN1-205ENST00000586577 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
CNN1-205ENST00000586577 PARP10Q53GL7 1025 aa16.57■□□□□ 0.24
CNN1-205ENST00000586577 ZNF408Q9H9D4 720 aa16.57■□□□□ 0.24
CNN1-205ENST00000586577 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
CNN1-205ENST00000586577 VAMP4O75379 141 aa16.56■□□□□ 0.24
CNN1-205ENST00000586577 CCDC30Q5VVM6 783 aa16.56■□□□□ 0.24
CNN1-205ENST00000586577 DIEXFQ68CQ4 756 aaKnown RBP16.56■□□□□ 0.24
CNN1-205ENST00000586577 ZC3H15Q8WU90 426 aaKnown RBP16.56■□□□□ 0.24
CNN1-205ENST00000586577 UTP14AQ9BVJ6 771 aaKnown RBP16.56■□□□□ 0.24
CNN1-205ENST00000586577 VPS33BQ9H267 617 aa16.56■□□□□ 0.24
CNN1-205ENST00000586577 PPIP5K2O43314 1243 aa16.55■□□□□ 0.24
CNN1-205ENST00000586577 SOX10P56693 466 aa16.55■□□□□ 0.24
CNN1-205ENST00000586577 HSP90AB3PQ58FF7 597 aa16.55■□□□□ 0.24
CNN1-205ENST00000586577 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
CNN1-205ENST00000586577 SAGE1Q9NXZ1 904 aa16.55■□□□□ 0.24
CNN1-205ENST00000586577 CDHR2Q9BYE9 1310 aa16.54■□□□□ 0.24
CNN1-205ENST00000586577 COL4A5P29400 1685 aa16.54■□□□□ 0.24
CNN1-205ENST00000586577 HCLS1P14317 486 aaPredicted RBP16.54■□□□□ 0.24
CNN1-205ENST00000586577 HOXA10P31260 410 aaPredicted RBP16.54■□□□□ 0.24
CNN1-205ENST00000586577 SLC10A5Q5PT55 438 aa16.54■□□□□ 0.24
CNN1-205ENST00000586577 CDC37L1Q7L3B6 337 aa16.54■□□□□ 0.24
CNN1-205ENST00000586577 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
CNN1-205ENST00000586577 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
CNN1-205ENST00000586577 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
CNN1-205ENST00000586577 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
CNN1-205ENST00000586577 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
CNN1-205ENST00000586577 PGAP2Q9UHJ9 254 aa16.53■□□□□ 0.24
CNN1-205ENST00000586577 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
CNN1-205ENST00000586577 HUNKP57058 714 aa16.52■□□□□ 0.24
CNN1-205ENST00000586577 SUPT20HQ8NEM7 779 aa16.52■□□□□ 0.24
CNN1-205ENST00000586577 FAM89AQ96GI7 184 aa16.52■□□□□ 0.24
CNN1-205ENST00000586577 CRAMP1Q96RY5 1269 aa16.52■□□□□ 0.24
CNN1-205ENST00000586577 MYD88Q99836 296 aa16.52■□□□□ 0.24
CNN1-205ENST00000586577 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
CNN1-205ENST00000586577 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
CNN1-205ENST00000586577 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.24
CNN1-205ENST00000586577 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
CNN1-205ENST00000586577 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
CNN1-205ENST00000586577 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
CNN1-205ENST00000586577 TNIP1Q15025 636 aa16.51■□□□□ 0.23
CNN1-205ENST00000586577 RTL5Q5HYW3 569 aaPredicted RBP16.51■□□□□ 0.23
CNN1-205ENST00000586577 CCDC102AQ96A19 550 aa16.51■□□□□ 0.23
CNN1-205ENST00000586577 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms