RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 FBXW7Q969H0 707 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 MST1RQ04912 1400 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 NFXL1Q6ZNB6 911 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 CCDC191Q8NCU4 936 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 PAG1Q9NWQ8 432 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 ATP2B3Q16720 1220 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 AKAP2Q9Y2D5 859 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 KNDC1Q76NI1 1749 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 PTPN12Q05209 780 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 ADCK5Q3MIX3 580 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 TFIP11Q9UBB9 837 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 HEG1Q9ULI3 1381 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 PIK3C2AO00443 1686 aa14.81□□□□□ -0.04
SMARCA4-208ENST00000585799 CHGBP05060 677 aa14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 HSPA4P34932 840 aa14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 SF3A1Q15459 793 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 TCIRG1Q13488 830 aa14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 BRF1Q92994 677 aa14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 MEGF6O75095 1541 aa14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 DNTTIP2Q5QJE6 756 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 DLG5Q8TDM6 1919 aa14.8□□□□□ -0.04
SMARCA4-208ENST00000585799 MSNP26038 577 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-208ENST00000585799 AOX1Q06278 1338 aa14.79□□□□□ -0.04
SMARCA4-208ENST00000585799 XRCC6P12956 609 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMARCA4-208ENST00000585799 AKAP12Q02952 1782 aa14.79□□□□□ -0.04
SMARCA4-208ENST00000585799 NEK1Q96PY6 1258 aa14.79□□□□□ -0.04
SMARCA4-208ENST00000585799 STX6O43752 255 aa14.79□□□□□ -0.04
SMARCA4-208ENST00000585799 ITGA6P23229 1130 aa14.79□□□□□ -0.04
SMARCA4-208ENST00000585799 ZSCAN31Q96LW9 406 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-208ENST00000585799 PHF14O94880 888 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 MCMDC2Q4G0Z9 681 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 NCAPD2Q15021 1401 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 TOM1O60784 492 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 IGHMBP2P38935 993 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 CSPP1Q1MSJ5 1256 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 FAM173BQ6P4H8 233 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 KAZALD1Q96I82 304 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 LSG1Q9H089 658 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 SLC27A2O14975 620 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 ZNF589Q86UQ0 364 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.78□□□□□ -0.041e-11■□□□□ 11.1
SMARCA4-208ENST00000585799 COPRSQ9NQ92 184 aa14.78□□□□□ -0.04
SMARCA4-208ENST00000585799 ANKRD1Q15327 319 aa14.77□□□□□ -0.04
SMARCA4-208ENST00000585799 HLFQ16534 295 aa14.77□□□□□ -0.04
SMARCA4-208ENST00000585799 LRP2BPQ9P2M1 347 aa14.77□□□□□ -0.04
SMARCA4-208ENST00000585799 CNPY2Q9Y2B0 182 aa14.77□□□□□ -0.04
SMARCA4-208ENST00000585799 TAF5LO75529 589 aa14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 MBD3O95983 291 aa14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 DRC7Q8IY82 874 aa14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 MTMR7Q9Y216 660 aa14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 KIF3AQ9Y496 699 aa14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 ADORA1P30542 326 aa14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 KRT32Q14532 448 aa14.77□□□□□ -0.05
SMARCA4-208ENST00000585799 XAGE2Q96GT9 111 aa14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 ISY1Q9ULR0 285 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 CHAF1AQ13111 956 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 PDCP20941 246 aa14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 MTX1Q13505 466 aa14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 PI16Q6UXB8 463 aa14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 Q6ZUG5 572 aa14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 ATG3Q9NT62 314 aa14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 RAI14Q9P0K7 980 aa14.76□□□□□ -0.05
SMARCA4-208ENST00000585799 AIDAQ96BJ3 306 aa14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 SNAP23O00161 211 aa14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 SMIM5Q71RC9 77 aa14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 ATP2B1P20020 1258 aa14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 SYT1P21579 422 aa14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 SLC9C2Q5TAH2 1124 aa14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 CCDC82Q8N4S0 544 aa14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 GREM2Q9H772 168 aa14.75□□□□□ -0.05
SMARCA4-208ENST00000585799 ATP5JP18859 108 aa14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 IMMTQ16891 758 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 KLHL40Q2TBA0 621 aa14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 RUFY3Q7L099 469 aa14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 SH2B1Q9NRF2 756 aaPredicted RBP14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 CCDC144CPQ8IYA2 1237 aa14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 ZAP70P43403 619 aa14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 DNM1Q05193 864 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 CAMK4Q16566 473 aa14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 USP48Q86UV5 1035 aa14.74□□□□□ -0.05
SMARCA4-208ENST00000585799 KBTBD3Q8NAB2 608 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 ZSCAN22P10073 491 aaPredicted RBP14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 TDO2P48775 406 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 KRT85P78386 507 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 SLC4A8Q2Y0W8 1093 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 TTLL5Q6EMB2 1281 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 JAG2Q9Y219 1238 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 LARGE1O95461 756 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 APOBRQ0VD83 1088 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 SYNE3Q6ZMZ3 975 aa14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 SOS2Q07890 1332 aaPredicted RBP14.73□□□□□ -0.05
SMARCA4-208ENST00000585799 MINDY4BA8MYZ0 360 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 CPLX2Q6PUV4 134 aaKnown RBP14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 H7C1W4 665 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 RNF113AO15541 343 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms