RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	POLD1	P28340	1107 aa		11.38	□□□□□ -0.59
NCOR1-223	ENST00000583226	VASH1	Q7L8A9	365 aa	Predicted RBP	11.38	□□□□□ -0.59
NCOR1-223	ENST00000583226	MPND	Q8N594	471 aa		11.38	□□□□□ -0.59
NCOR1-223	ENST00000583226	PAPPA	Q13219	1627 aa		11.38	□□□□□ -0.59
NCOR1-223	ENST00000583226	AKAP12	Q02952	1782 aa		11.37	□□□□□ -0.59
NCOR1-223	ENST00000583226	TOM1L2	Q6ZVM7	507 aa		11.37	□□□□□ -0.59
NCOR1-223	ENST00000583226	CDK15	Q96Q40	435 aa		11.37	□□□□□ -0.59
NCOR1-223	ENST00000583226	ATP13A2	Q9NQ11	1180 aa		11.37	□□□□□ -0.59
NCOR1-223	ENST00000583226	COL24A1	Q17RW2	1714 aa		11.36	□□□□□ -0.59
NCOR1-223	ENST00000583226	YBX3	P16989	372 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
NCOR1-223	ENST00000583226	FSHR	P23945	695 aa		11.36	□□□□□ -0.59
NCOR1-223	ENST00000583226	PTK2	Q05397	1052 aa		11.36	□□□□□ -0.59
NCOR1-223	ENST00000583226	ERFE	Q4G0M1	354 aa		11.36	□□□□□ -0.59
NCOR1-223	ENST00000583226	NLGN2	Q8NFZ4	835 aa		11.36	□□□□□ -0.59
NCOR1-223	ENST00000583226	MPHOSPH9	Q99550	1183 aa		11.36	□□□□□ -0.59
NCOR1-223	ENST00000583226	C1QTNF2	Q9BXJ5	285 aa		11.36	□□□□□ -0.59
NCOR1-223	ENST00000583226	WDR17	Q8IZU2	1322 aa		11.35	□□□□□ -0.59
NCOR1-223	ENST00000583226	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.35	□□□□□ -0.59
NCOR1-223	ENST00000583226	BMP1	P13497	986 aa		11.35	□□□□□ -0.59
NCOR1-223	ENST00000583226	WDR4	P57081	412 aa	Known RBP	11.35	□□□□□ -0.59
NCOR1-223	ENST00000583226	ZNF827	Q17R98	1081 aa		11.35	□□□□□ -0.59
NCOR1-223	ENST00000583226	TRIM34	Q9BYJ4	488 aa		11.35	□□□□□ -0.59
NCOR1-223	ENST00000583226	WNK3	Q9BYP7	1800 aa		11.35	□□□□□ -0.59
NCOR1-223	ENST00000583226	ADCY9	O60503	1353 aa		11.34	□□□□□ -0.59
NCOR1-223	ENST00000583226	EXOC5	O00471	708 aa		11.34	□□□□□ -0.59
NCOR1-223	ENST00000583226	SLC10A4	Q96EP9	437 aa		11.34	□□□□□ -0.59
NCOR1-223	ENST00000583226	CDK19	Q9BWU1	502 aa		11.34	□□□□□ -0.59
NCOR1-223	ENST00000583226	TOPAZ1	Q8N9V7	1692 aa		11.33	□□□□□ -0.6
NCOR1-223	ENST00000583226	BRD4	O60885	1362 aa	Predicted RBP	11.33	□□□□□ -0.6
NCOR1-223	ENST00000583226	NR3C2	P08235	984 aa		11.33	□□□□□ -0.6
NCOR1-223	ENST00000583226	GRM5	P41594	1212 aa		11.33	□□□□□ -0.6
NCOR1-223	ENST00000583226	NR5A1	Q13285	461 aa		11.33	□□□□□ -0.6
NCOR1-223	ENST00000583226	CARD10	Q9BWT7	1032 aa		11.33	□□□□□ -0.6
NCOR1-223	ENST00000583226	PCNT	O95613	3336 aa		11.33	□□□□□ -0.6
NCOR1-223	ENST00000583226	TRMT44	Q8IYL2	757 aa	Known RBP	11.32	□□□□□ -0.6
NCOR1-223	ENST00000583226	DNAJC5G	Q8N7S2	189 aa		11.32	□□□□□ -0.6
NCOR1-223	ENST00000583226	ADAM32	Q8TC27	787 aa		11.32	□□□□□ -0.6
NCOR1-223	ENST00000583226	LRRC4B	Q9NT99	713 aa		11.32	□□□□□ -0.6
NCOR1-223	ENST00000583226	NHS	Q6T4R5	1651 aa		11.32	□□□□□ -0.6
NCOR1-223	ENST00000583226	COL18A1	P39060	1754 aa		11.31	□□□□□ -0.6
NCOR1-223	ENST00000583226	ZBTB7C	A1YPR0	619 aa		11.31	□□□□□ -0.6
NCOR1-223	ENST00000583226	ZIC2	O95409	532 aa	Predicted RBP	11.31	□□□□□ -0.6
NCOR1-223	ENST00000583226	TIMP2	P16035	220 aa		11.31	□□□□□ -0.6
NCOR1-223	ENST00000583226	OCSTAMP	Q9BR26	566 aa		11.31	□□□□□ -0.6
NCOR1-223	ENST00000583226	SNRK	Q9NRH2	765 aa		11.31	□□□□□ -0.6
NCOR1-223	ENST00000583226	QSER1	Q2KHR3	1735 aa		11.31	□□□□□ -0.6
NCOR1-223	ENST00000583226	SLIT3	O75094	1523 aa		11.3	□□□□□ -0.6
NCOR1-223	ENST00000583226	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.3	□□□□□ -0.6
NCOR1-223	ENST00000583226	USP6	P35125	1406 aa		11.3	□□□□□ -0.6
NCOR1-223	ENST00000583226	TNS2	Q63HR2	1409 aa		11.3	□□□□□ -0.6
NCOR1-223	ENST00000583226	BANK1	Q8NDB2	785 aa		11.3	□□□□□ -0.6
NCOR1-223	ENST00000583226	ZFAND3	Q9H8U3	227 aa		11.3	□□□□□ -0.6
NCOR1-223	ENST00000583226	GPSM3	Q9Y4H4	160 aa		11.3	□□□□□ -0.6
NCOR1-223	ENST00000583226	PNPLA7	Q6ZV29	1317 aa		11.3	□□□□□ -0.6
NCOR1-223	ENST00000583226	SLC27A3	Q5K4L6	730 aa		11.29	□□□□□ -0.6
NCOR1-223	ENST00000583226	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.29	□□□□□ -0.6
NCOR1-223	ENST00000583226	ITPKC	Q96DU7	683 aa		11.29	□□□□□ -0.6
NCOR1-223	ENST00000583226	MAP4K5	Q9Y4K4	846 aa		11.29	□□□□□ -0.6
NCOR1-223	ENST00000583226	CCDC7	Q96M83	1385 aa		11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	CPSF1	Q10570	1443 aa	Known RBP	11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	PRELP	P51888	382 aa		11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	RAB15	P59190	212 aa		11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	MTMR14	Q8NCE2	650 aa		11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	ZNF526	Q8TF50	670 aa	Predicted RBP	11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	ACSBG1	Q96GR2	724 aa		11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	SENP2	Q9HC62	589 aa		11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	ABCC6	O95255	1503 aa		11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	BTAF1	O14981	1849 aa		11.28	□□□□□ -0.6
NCOR1-223	ENST00000583226	TRIM46	Q7Z4K8	759 aa		11.27	□□□□□ -0.61
NCOR1-223	ENST00000583226	ARHGEF25	Q86VW2	580 aa		11.27	□□□□□ -0.61
NCOR1-223	ENST00000583226	DZIP3	Q86Y13	1208 aa	Known RBP	11.27	□□□□□ -0.61
NCOR1-223	ENST00000583226	CCDC116	Q8IYX3	515 aa		11.27	□□□□□ -0.61
NCOR1-223	ENST00000583226	KCTD15	Q96SI1	283 aa	Predicted RBP	11.27	□□□□□ -0.61
NCOR1-223	ENST00000583226	TFCP2L1	Q9NZI6	479 aa		11.27	□□□□□ -0.61
NCOR1-223	ENST00000583226	TRPM1	Q7Z4N2	1603 aa		11.27	□□□□□ -0.61
NCOR1-223	ENST00000583226	CSB-PGBD3	P0DP91	1061 aa		11.26	□□□□□ -0.61
NCOR1-223	ENST00000583226	SNRPB	P14678	240 aa	Known RBP	11.26	□□□□□ -0.61
NCOR1-223	ENST00000583226	ZNF775	Q96BV0	537 aa	Predicted RBP	11.26	□□□□□ -0.61
NCOR1-223	ENST00000583226	CD2AP	Q9Y5K6	639 aa		11.26	□□□□□ -0.61
NCOR1-223	ENST00000583226	KAT6B	Q8WYB5	2073 aa		11.26	□□□□□ -0.61
NCOR1-223	ENST00000583226	PPIP5K1	Q6PFW1	1433 aa		11.26	□□□□□ -0.61
NCOR1-223	ENST00000583226	KLF16	Q9BXK1	252 aa	Predicted RBP	11.25	□□□□□ -0.61
NCOR1-223	ENST00000583226	CDV3	Q9UKY7	258 aa	Known RBP	11.25	□□□□□ -0.61
NCOR1-223	ENST00000583226	NDUFB9	Q9Y6M9	179 aa		11.25	□□□□□ -0.61
NCOR1-223	ENST00000583226	ZBBX	A8MT70	800 aa		11.24	□□□□□ -0.61
NCOR1-223	ENST00000583226	KCNH5	Q8NCM2	988 aa		11.24	□□□□□ -0.61
NCOR1-223	ENST00000583226	TRIM47	Q96LD4	638 aa		11.24	□□□□□ -0.61
NCOR1-223	ENST00000583226	PURB	Q96QR8	312 aa	Known RBP	11.24	□□□□□ -0.61
NCOR1-223	ENST00000583226	PCDHB9	Q9Y5E1	797 aa		11.24	□□□□□ -0.61
NCOR1-223	ENST00000583226	APBB1	O00213	710 aa		11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	TOMM70	O94826	608 aa		11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	SCARF1	Q14162	830 aa		11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	MRPL14	Q6P1L8	145 aa	Known RBP	11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	TNS4	Q8IZW8	715 aa		11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	JMY	Q8N9B5	988 aa		11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	DCAF11	Q8TEB1	546 aa		11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	KIFC2	Q96AC6	838 aa		11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	EMILIN1	Q9Y6C2	1016 aa		11.23	□□□□□ -0.61
NCOR1-223	ENST00000583226	RGPD5	Q99666	1765 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms