RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 HIF1AQ16665 826 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 PLEKHM2Q8IWE5 1019 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 LARGE2Q8N3Y3 721 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 CHMP7Q8WUX9 453 aaPredicted RBP7.47□□□□□ -1.21
IFT20-205ENST00000578009 POM121Q96HA1 1249 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 ZNF594Q96JF6 807 aaPredicted RBP7.47□□□□□ -1.21
IFT20-205ENST00000578009 SSBP4Q9BWG4 385 aaPredicted RBP7.47□□□□□ -1.21
IFT20-205ENST00000578009 EFCC1Q9HA90 598 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 GOLGA2P5Q9HBQ8 144 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 MKRN1Q9UHC7 482 aaKnown RBP7.47□□□□□ -1.21
IFT20-205ENST00000578009 NESP48681 1621 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 CUX2O14529 1486 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 ABCA10Q8WWZ4 1543 aa7.47□□□□□ -1.21
IFT20-205ENST00000578009 C21orf2O43822 256 aa7.46□□□□□ -1.22
IFT20-205ENST00000578009 CPB1P15086 417 aa7.46□□□□□ -1.22
IFT20-205ENST00000578009 CCINQ13939 588 aa7.46□□□□□ -1.22
IFT20-205ENST00000578009 FAM35AQ86V20 835 aa7.46□□□□□ -1.22
IFT20-205ENST00000578009 ATAD2Q6PL18 1390 aa7.46□□□□□ -1.22
IFT20-205ENST00000578009 POM121CA8CG34 1229 aa7.45□□□□□ -1.22
IFT20-205ENST00000578009 IREB2P48200 963 aaKnown RBP7.45□□□□□ -1.22
IFT20-205ENST00000578009 TPRNQ4KMQ1 711 aa7.45□□□□□ -1.22
IFT20-205ENST00000578009 WFDC12Q8WWY7 111 aa7.45□□□□□ -1.22
IFT20-205ENST00000578009 SCG3Q8WXD2 468 aaKnown RBP7.45□□□□□ -1.22
IFT20-205ENST00000578009 C2orf49Q9BVC5 232 aaPredicted RBP7.45□□□□□ -1.22
IFT20-205ENST00000578009 POLA1P09884 1462 aaPredicted RBP7.44□□□□□ -1.22
IFT20-205ENST00000578009 ATP9BO43861 1147 aa7.44□□□□□ -1.22
IFT20-205ENST00000578009 RAD21O60216 631 aa7.44□□□□□ -1.22
IFT20-205ENST00000578009 MSL1Q68DK7 614 aa7.44□□□□□ -1.22
IFT20-205ENST00000578009 SIX5Q8N196 739 aa7.44□□□□□ -1.22
IFT20-205ENST00000578009 ADAMTS19Q8TE59 1207 aa7.44□□□□□ -1.22
IFT20-205ENST00000578009 CARMIL1Q5VZK9 1371 aa7.44□□□□□ -1.22
IFT20-205ENST00000578009 URB2Q14146 1524 aaKnown RBP7.43□□□□□ -1.22
IFT20-205ENST00000578009 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
IFT20-205ENST00000578009 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
IFT20-205ENST00000578009 VPS8Q8N3P4 1428 aa7.43□□□□□ -1.22
IFT20-205ENST00000578009 NOS3P29474 1203 aa7.42□□□□□ -1.22
IFT20-205ENST00000578009 PCSK7Q16549 785 aa7.42□□□□□ -1.22
IFT20-205ENST00000578009 ILDR2Q71H61 639 aa7.42□□□□□ -1.22
IFT20-205ENST00000578009 KRT25Q7Z3Z0 450 aa7.42□□□□□ -1.22
IFT20-205ENST00000578009 STAG2Q8N3U4 1231 aa7.42□□□□□ -1.22
IFT20-205ENST00000578009 DTWD1Q8N5C7 304 aa7.42□□□□□ -1.22
IFT20-205ENST00000578009 UCN2Q96RP3 112 aa7.42□□□□□ -1.22
IFT20-205ENST00000578009 RNF112Q9ULX5 631 aa7.42□□□□□ -1.22
IFT20-205ENST00000578009 TGFBR3LH3BV60 316 aa7.41□□□□□ -1.22
IFT20-205ENST00000578009 RTN1Q16799 776 aa7.41□□□□□ -1.22
IFT20-205ENST00000578009 IER5Q5VY09 327 aa7.41□□□□□ -1.22
IFT20-205ENST00000578009 ELMSAN1Q6PJG2 1045 aa7.41□□□□□ -1.22
IFT20-205ENST00000578009 WFDC8Q8IUA0 241 aa7.41□□□□□ -1.22
IFT20-205ENST00000578009 LPIN3Q9BQK8 851 aa7.41□□□□□ -1.22
IFT20-205ENST00000578009 LGR5O75473 907 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 DKK1O94907 266 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 EPB42P16452 691 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 RASA1P20936 1047 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 MLLT1Q03111 559 aaPredicted RBP7.4□□□□□ -1.22
IFT20-205ENST00000578009 PLAURQ03405 335 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 PERM1Q5SV97 790 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 IGF2-ASQ6U949 168 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 GAS2L2Q8NHY3 880 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 MEGF10Q96KG7 1140 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 HINFPQ9BQA5 517 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 FRRS1LQ9P0K9 344 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 BCS1LQ9Y276 419 aa7.4□□□□□ -1.22
IFT20-205ENST00000578009 RAD54L2Q9Y4B4 1467 aa7.39□□□□□ -1.23
IFT20-205ENST00000578009 ZBTB42B2RXF5 422 aa7.39□□□□□ -1.23
IFT20-205ENST00000578009 ZEB1P37275 1124 aaPredicted RBP7.39□□□□□ -1.23
IFT20-205ENST00000578009 SEC13P55735 322 aa7.39□□□□□ -1.23
IFT20-205ENST00000578009 GRIK5Q16478 980 aa7.39□□□□□ -1.23
IFT20-205ENST00000578009 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
IFT20-205ENST00000578009 PCMTD2Q9NV79 361 aa7.39□□□□□ -1.23
IFT20-205ENST00000578009 ZFATQ9P243 1243 aa7.39□□□□□ -1.23
IFT20-205ENST00000578009 DMGDHQ9UI17 866 aaKnown RBP7.39□□□□□ -1.23
IFT20-205ENST00000578009 SLC24A1O60721 1099 aa7.38□□□□□ -1.23
IFT20-205ENST00000578009 MAP3K6O95382 1288 aa7.38□□□□□ -1.23
IFT20-205ENST00000578009 PRR23CQ6ZRP0 262 aa7.38□□□□□ -1.23
IFT20-205ENST00000578009 KLK14Q9P0G3 267 aa7.38□□□□□ -1.23
IFT20-205ENST00000578009 MRC2Q9UBG0 1479 aa7.37□□□□□ -1.23
IFT20-205ENST00000578009 TARSP26639 723 aaKnown RBP7.37□□□□□ -1.23
IFT20-205ENST00000578009 GRNP28799 593 aaKnown RBP7.37□□□□□ -1.23
IFT20-205ENST00000578009 IDH3AP50213 366 aa7.37□□□□□ -1.23
IFT20-205ENST00000578009 HFE2Q6ZVN8 426 aa7.37□□□□□ -1.23
IFT20-205ENST00000578009 TRPM4Q8TD43 1214 aa7.37□□□□□ -1.23
IFT20-205ENST00000578009 SMG9Q9H0W8 520 aaKnown RBP7.37□□□□□ -1.23
IFT20-205ENST00000578009 CUL7Q14999 1698 aa7.36□□□□□ -1.23
IFT20-205ENST00000578009 DEAF1O75398 565 aaPredicted RBP7.36□□□□□ -1.23
IFT20-205ENST00000578009 SASH3O75995 380 aa7.36□□□□□ -1.23
IFT20-205ENST00000578009 RARAP10276 462 aa7.36□□□□□ -1.23
IFT20-205ENST00000578009 SSTR4P31391 388 aa7.36□□□□□ -1.23
IFT20-205ENST00000578009 INPP5BP32019 993 aa7.36□□□□□ -1.23
IFT20-205ENST00000578009 MCTP1Q6DN14 999 aa7.36□□□□□ -1.23
IFT20-205ENST00000578009 GAPVD1Q14C86 1478 aa7.36□□□□□ -1.23
IFT20-205ENST00000578009 WDR97A6NE52 1622 aa7.35□□□□□ -1.23
IFT20-205ENST00000578009 ALX3O95076 343 aa7.35□□□□□ -1.23
IFT20-205ENST00000578009 EIF2AK2P19525 551 aaKnown RBP7.35□□□□□ -1.23
IFT20-205ENST00000578009 IFT43Q96FT9 208 aa7.35□□□□□ -1.23
IFT20-205ENST00000578009 KRTAP4-9Q9BYQ8 210 aa7.35□□□□□ -1.23
IFT20-205ENST00000578009 KRTAP4-2Q9BYR5 136 aa7.35□□□□□ -1.23
IFT20-205ENST00000578009 AKTIPQ9H8T0 292 aa7.35□□□□□ -1.23
IFT20-205ENST00000578009 ARAP1Q96P48 1450 aa7.35□□□□□ -1.23
IFT20-205ENST00000578009 ARHGAP35Q9NRY4 1499 aa7.35□□□□□ -1.23
IFT20-205ENST00000578009 ABCA5Q8WWZ7 1642 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms