RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 FANCCQ00597 558 aa9.96□□□□□ -0.82
TOM1L1-222ENST00000575909 TTC39BQ5VTQ0 682 aaPredicted RBP9.96□□□□□ -0.82
TOM1L1-222ENST00000575909 EPS8L3Q8TE67 593 aaKnown RBP9.96□□□□□ -0.82
TOM1L1-222ENST00000575909 C12orf49Q9H741 205 aa9.96□□□□□ -0.82
TOM1L1-222ENST00000575909 USP35Q9P2H5 1018 aa9.96□□□□□ -0.82
TOM1L1-222ENST00000575909 PCDHGC4Q9Y5F7 938 aa9.96□□□□□ -0.82
TOM1L1-222ENST00000575909 H7C1W4 665 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 EFSO43281 561 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 ZNF76P36508 570 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 LAMC2Q13753 1193 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 LAPTM4AQ15012 233 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 RIPOR1Q6ZS17 1223 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 METTL16Q86W50 562 aaKnown RBP9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 GALNT12Q8IXK2 581 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 C1orf127Q8N9H9 656 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 SRCIN1Q9C0H9 1055 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 CHRDQ9H2X0 955 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 CNTN3Q9P232 1028 aa9.95□□□□□ -0.82
TOM1L1-222ENST00000575909 CTSHP09668 335 aa9.94□□□□□ -0.82
TOM1L1-222ENST00000575909 PTSQ03393 145 aa9.94□□□□□ -0.82
TOM1L1-222ENST00000575909 CCINQ13939 588 aa9.94□□□□□ -0.82
TOM1L1-222ENST00000575909 C9orf131Q5VYM1 1079 aa9.94□□□□□ -0.82
TOM1L1-222ENST00000575909 OSBPL7Q9BZF2 842 aa9.94□□□□□ -0.82
TOM1L1-222ENST00000575909 NUCKS1Q9H1E3 243 aaKnown RBP9.94□□□□□ -0.82
TOM1L1-222ENST00000575909 NPHS2Q9NP85 383 aa9.94□□□□□ -0.82
TOM1L1-222ENST00000575909 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
TOM1L1-222ENST00000575909 SLC35F4A4IF30 521 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 EREGO14944 169 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 CES1P23141 567 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 IRS1P35568 1242 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 PI16Q6UXB8 463 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 NT5DC4Q86YG4 428 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 GSX2Q9BZM3 304 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 EFCC1Q9HA90 598 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 FAM8A1Q9UBU6 413 aa9.93□□□□□ -0.82
TOM1L1-222ENST00000575909 SASH3O75995 380 aa9.92□□□□□ -0.82
TOM1L1-222ENST00000575909 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
TOM1L1-222ENST00000575909 TNP2Q05952 138 aa9.92□□□□□ -0.82
TOM1L1-222ENST00000575909 SFSWAPQ12872 951 aaKnown RBP9.92□□□□□ -0.82
TOM1L1-222ENST00000575909 KHNYNO15037 678 aaKnown RBP9.91□□□□□ -0.82
TOM1L1-222ENST00000575909 THBS1P07996 1170 aa9.91□□□□□ -0.82
TOM1L1-222ENST00000575909 RAD51AP2Q09MP3 1159 aa9.91□□□□□ -0.82
TOM1L1-222ENST00000575909 UBAP2LQ14157 1087 aaKnown RBP9.91□□□□□ -0.82
TOM1L1-222ENST00000575909 NAALADL2Q58DX5 795 aa9.91□□□□□ -0.82
TOM1L1-222ENST00000575909 GMCL1Q96IK5 515 aa9.91□□□□□ -0.82
TOM1L1-222ENST00000575909 DCDC2BA2VCK2 349 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 ST8SIA5O15466 376 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 GADD45BO75293 160 aaPredicted RBP9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 MAPTP10636 758 aaKnown RBP9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 EDN3P14138 238 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 VEGFBP49765 207 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 TRIM22Q8IYM9 498 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 OR13H1Q8NG92 308 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 KIFC2Q96AC6 838 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 BCO2Q9BYV7 579 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 TGIF2Q9GZN2 237 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 SENP2Q9HC62 589 aa9.9□□□□□ -0.82
TOM1L1-222ENST00000575909 SOBPA7XYQ1 873 aa9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 RARAP10276 462 aa9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 TARSP26639 723 aaKnown RBP9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 CCDC155Q8N6L0 562 aa9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 SREK1Q8WXA9 508 aaKnown RBP9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 PNMA5Q96PV4 448 aa9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 SUV39H2Q9H5I1 410 aa9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 NDFIP2Q9NV92 336 aa9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 PPP4R2Q9NY27 417 aa9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 MARK1Q9P0L2 795 aa9.89□□□□□ -0.83
TOM1L1-222ENST00000575909 USP31Q70CQ4 1352 aa9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 PHF20L1A8MW92 1017 aa9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 USP17L7P0C7H9 530 aa9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 ST13P50502 369 aaKnown RBP9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 TAF1CQ15572 869 aaPredicted RBP9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 DBN1Q16643 649 aa9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 KIAA0319Q5VV43 1072 aa9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 NXPE4Q6UWF7 544 aa9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 KRT25Q7Z3Z0 450 aa9.88□□□□□ -0.83
TOM1L1-222ENST00000575909 BNIP3LO60238 219 aa9.87□□□□□ -0.83
TOM1L1-222ENST00000575909 MMP20O60882 483 aa9.87□□□□□ -0.83
TOM1L1-222ENST00000575909 CYP2E1P05181 493 aaPredicted RBP9.87□□□□□ -0.83
TOM1L1-222ENST00000575909 GRM2Q14416 872 aa9.87□□□□□ -0.83
TOM1L1-222ENST00000575909 DRC1Q96MC2 740 aa9.87□□□□□ -0.83
TOM1L1-222ENST00000575909 TRAK1Q9UPV9 953 aa9.87□□□□□ -0.83
TOM1L1-222ENST00000575909 MAP3K6O95382 1288 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 SOX18P35713 384 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 SPEM2Q0P670 501 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 HS2ST1Q7LGA3 356 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 CCSER2Q9H7U1 834 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 STRN4Q9NRL3 753 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 ZFATQ9P243 1243 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 KANSL3Q9P2N6 904 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 DACH1Q9UI36 760 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 SALL4Q9UJQ4 1053 aa9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 ATXN7L1Q9ULK2 861 aaPredicted RBP9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.86□□□□□ -0.83
TOM1L1-222ENST00000575909 A0A1W2PP55 124 aa9.85□□□□□ -0.83
TOM1L1-222ENST00000575909 PSAPP07602 524 aa9.85□□□□□ -0.83
TOM1L1-222ENST00000575909 NFKB1P19838 968 aa9.85□□□□□ -0.83
TOM1L1-222ENST00000575909 GSTT1P30711 240 aa9.85□□□□□ -0.83
TOM1L1-222ENST00000575909 PTPN12Q05209 780 aaKnown RBP9.85□□□□□ -0.83
TOM1L1-222ENST00000575909 SF3A1Q15459 793 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms