RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 TMEM88BA6NKF7 163 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 TNFRSF10BO14763 440 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 LILRB5O75023 590 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 EGFRP00533 1210 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 ALBP02768 609 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 RARAP10276 462 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 PLA2G4EQ3MJ16 856 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 PIK3R5Q8WYR1 880 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 ZFATQ9P243 1243 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 USP20Q9Y2K6 914 aa6.22□□□□□ -1.41
NUP88-209ENST00000574855 KRBA1A5PL33 1030 aa6.21□□□□□ -1.42
NUP88-209ENST00000574855 SUPT5HO00267 1087 aaKnown RBP6.21□□□□□ -1.42
NUP88-209ENST00000574855 SSFA2P28290 1259 aa6.21□□□□□ -1.42
NUP88-209ENST00000574855 C20orf204Q6ZNR8 217 aa6.21□□□□□ -1.42
NUP88-209ENST00000574855 DHX32Q7L7V1 743 aaKnown RBP6.21□□□□□ -1.42
NUP88-209ENST00000574855 ABTB2Q8N961 1025 aa6.21□□□□□ -1.42
NUP88-209ENST00000574855 SEPT3Q9UH03 358 aa6.21□□□□□ -1.42
NUP88-209ENST00000574855 MSTNO14793 375 aa6.2□□□□□ -1.42
NUP88-209ENST00000574855 ZAP70P43403 619 aa6.2□□□□□ -1.42
NUP88-209ENST00000574855 XP32Q5T750 250 aa6.2□□□□□ -1.42
NUP88-209ENST00000574855 FAM35AQ86V20 835 aa6.2□□□□□ -1.42
NUP88-209ENST00000574855 TRPM4Q8TD43 1214 aa6.2□□□□□ -1.42
NUP88-209ENST00000574855 JPH1Q9HDC5 661 aaPredicted RBP6.2□□□□□ -1.42
NUP88-209ENST00000574855 TLR7Q9NYK1 1049 aaKnown RBP6.2□□□□□ -1.42
NUP88-209ENST00000574855 FNDC3AQ9Y2H6 1198 aaKnown RBP6.2□□□□□ -1.42
NUP88-209ENST00000574855 KCNMB2Q9Y691 235 aa6.2□□□□□ -1.42
NUP88-209ENST00000574855 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
NUP88-209ENST00000574855 RGS9O75916 674 aaPredicted RBP6.19□□□□□ -1.42
NUP88-209ENST00000574855 COL9A3Q14050 684 aaPredicted RBP6.19□□□□□ -1.42
NUP88-209ENST00000574855 PRRT3Q5FWE3 981 aa6.19□□□□□ -1.42
NUP88-209ENST00000574855 FAM26DQ5JW98 314 aa6.19□□□□□ -1.42
NUP88-209ENST00000574855 PSAPL1Q6NUJ1 521 aa6.19□□□□□ -1.42
NUP88-209ENST00000574855 C8orf86Q6ZUL3 223 aa6.19□□□□□ -1.42
NUP88-209ENST00000574855 NUDT8Q8WV74 236 aa6.19□□□□□ -1.42
NUP88-209ENST00000574855 ARID3AQ99856 593 aa6.19□□□□□ -1.42
NUP88-209ENST00000574855 MTMR7Q9Y216 660 aa6.19□□□□□ -1.42
NUP88-209ENST00000574855 ZBTB42B2RXF5 422 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 UBAP1LF5GYI3 381 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 ZBTB39O15060 712 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 PSAPP07602 524 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 CPB1P15086 417 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 NRLP54845 237 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 PLAURQ03405 335 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 TRIM28Q13263 835 aaKnown RBP6.18□□□□□ -1.42
NUP88-209ENST00000574855 TRAPPC3LQ5T215 181 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 ELMSAN1Q6PJG2 1045 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 NLRP13Q86W25 1043 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 HELQQ8TDG4 1101 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 GPR152Q8TDT2 470 aa6.18□□□□□ -1.42
NUP88-209ENST00000574855 MMP20O60882 483 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 ITGB2P05107 769 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 NID1P14543 1247 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 AFF1P51825 1210 aaKnown RBP6.17□□□□□ -1.42
NUP88-209ENST00000574855 GPLD1P80108 840 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 MLLT1Q03111 559 aaPredicted RBP6.17□□□□□ -1.42
NUP88-209ENST00000574855 GTF3C2Q8WUA4 911 aaPredicted RBP6.17□□□□□ -1.42
NUP88-209ENST00000574855 SPOCK3Q9BQ16 436 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 FRRS1LQ9P0K9 344 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 NAGPAQ9UK23 515 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 TIMELESSQ9UNS1 1208 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 USTQ9Y2C2 406 aa6.17□□□□□ -1.42
NUP88-209ENST00000574855 LOC102724428A0A0B4J2F2 783 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 CARNS1A5YM72 827 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 C1QTNF9BB2RNN3 333 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 RPLP1P05386 114 aaKnown RBP6.16□□□□□ -1.42
NUP88-209ENST00000574855 SOX18P35713 384 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 SCNN1AP37088 669 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 SIK1P57059 783 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 TRIP4Q15650 581 aaPredicted RBP6.16□□□□□ -1.42
NUP88-209ENST00000574855 PERM1Q5SV97 790 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 TTC39BQ5VTQ0 682 aaPredicted RBP6.16□□□□□ -1.42
NUP88-209ENST00000574855 HFE2Q6ZVN8 426 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 TTC9Q92623 222 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 RBSNQ9H1K0 784 aa6.16□□□□□ -1.42
NUP88-209ENST00000574855 APBA3O96018 575 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 PCSK2P16519 638 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 NOM1Q5C9Z4 860 aaKnown RBP6.15□□□□□ -1.42
NUP88-209ENST00000574855 B4GALNT3Q6L9W6 998 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 ALKBH2Q6NS38 261 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 PHLDB3Q6NSJ2 640 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 CD163Q86VB7 1156 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 TTC16Q8NEE8 873 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 LPIN3Q9BQK8 851 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
NUP88-209ENST00000574855 J3QW42 95 aa6.14□□□□□ -1.43
NUP88-209ENST00000574855 GHRHP01286 108 aa6.14□□□□□ -1.43
NUP88-209ENST00000574855 PROCP04070 461 aa6.14□□□□□ -1.43
NUP88-209ENST00000574855 HOXD8P13378 290 aaPredicted RBP6.14□□□□□ -1.43
NUP88-209ENST00000574855 EIF2AK2P19525 551 aaKnown RBP6.14□□□□□ -1.43
NUP88-209ENST00000574855 RAC1P63000 192 aa6.14□□□□□ -1.43
NUP88-209ENST00000574855 PDE4CQ08493 712 aa6.14□□□□□ -1.43
NUP88-209ENST00000574855 ATCAYQ86WG3 371 aa6.14□□□□□ -1.43
NUP88-209ENST00000574855 OR13H1Q8NG92 308 aa6.14□□□□□ -1.43
NUP88-209ENST00000574855 NUDT16Q96DE0 195 aaKnown RBP6.14□□□□□ -1.43
NUP88-209ENST00000574855 SMG9Q9H0W8 520 aaKnown RBP6.14□□□□□ -1.43
NUP88-209ENST00000574855 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
NUP88-209ENST00000574855 FAM229AH3BQW9 127 aa6.13□□□□□ -1.43
NUP88-209ENST00000574855 FAM13AO94988 1023 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms