RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 ZHX1Q9UKY1 873 aaPredicted RBP17.61■□□□□ 0.41
ABR-228ENST00000574437 ALDH1L1O75891 902 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 FGD1P98174 961 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 SCAND2PQ9GZW5 306 aaPredicted RBP17.6■□□□□ 0.41
ABR-228ENST00000574437 STRCP1A6NGW2 1772 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 CEMIPQ8WUJ3 1361 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 CACNA1FO60840 1977 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 GRM8O00222 908 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 CHRNA2Q15822 529 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
ABR-228ENST00000574437 ZNF589Q86UQ0 364 aaPredicted RBP17.6■□□□□ 0.41
ABR-228ENST00000574437 PDCL2Q8N4E4 241 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 HDAC5Q9UQL6 1122 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 NDUFB9Q9Y6M9 179 aa17.6■□□□□ 0.41
ABR-228ENST00000574437 JAK2O60674 1132 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 GTF2F1P35269 517 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■■■■□ 22.6
ABR-228ENST00000574437 ANKRD1Q15327 319 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 ARHGEF25Q86VW2 580 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 H3BQV1 296 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 RPS6KB1P23443 525 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 IFFO2Q5TF58 517 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 RIC3Q7Z5B4 369 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 CADPS2Q86UW7 1296 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 DNAJC25Q9H1X3 360 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 AKAP4Q5JQC9 854 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 LEO1Q8WVC0 666 aaPredicted RBP17.59■□□□□ 0.41
ABR-228ENST00000574437 PRDM4Q9UKN5 801 aa17.59■□□□□ 0.41
ABR-228ENST00000574437 LRRC37A3O60309 1634 aa17.58■□□□□ 0.41
ABR-228ENST00000574437 NR1I2O75469 434 aa17.58■□□□□ 0.4
ABR-228ENST00000574437 KCNB2Q92953 911 aa17.58■□□□□ 0.4
ABR-228ENST00000574437 NWD1Q149M9 1564 aa17.58■□□□□ 0.4
ABR-228ENST00000574437 GIGYF1O75420 1035 aaPredicted RBP17.58■□□□□ 0.4
ABR-228ENST00000574437 MYL6BP14649 208 aa17.58■□□□□ 0.4
ABR-228ENST00000574437 ZNF165P49910 485 aa17.58■□□□□ 0.4
ABR-228ENST00000574437 LRRC2Q9BYS8 371 aa17.58■□□□□ 0.4
ABR-228ENST00000574437 TOB2Q14106 344 aaPredicted RBP17.57■□□□□ 0.4
ABR-228ENST00000574437 NAP1L2Q9ULW6 460 aaPredicted RBP17.57■□□□□ 0.4
ABR-228ENST00000574437 LMTK3Q96Q04 1460 aa17.57■□□□□ 0.4
ABR-228ENST00000574437 PPFIA3O75145 1194 aa17.57■□□□□ 0.4
ABR-228ENST00000574437 ATP2B3Q16720 1220 aa17.57■□□□□ 0.4
ABR-228ENST00000574437 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
ABR-228ENST00000574437 MST1RQ04912 1400 aa17.57■□□□□ 0.4
ABR-228ENST00000574437 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
ABR-228ENST00000574437 DDX58O95786 925 aaKnown RBP17.56■□□□□ 0.4
ABR-228ENST00000574437 LINS1Q8NG48 757 aa17.56■□□□□ 0.4
ABR-228ENST00000574437 ZNF592Q92610 1267 aa17.56■□□□□ 0.4
ABR-228ENST00000574437 ANKRD24Q8TF21 1146 aa17.56■□□□□ 0.4
ABR-228ENST00000574437 BRF1Q92994 677 aa17.56■□□□□ 0.4
ABR-228ENST00000574437 KAZALD1Q96I82 304 aa17.56■□□□□ 0.4
ABR-228ENST00000574437 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
ABR-228ENST00000574437 DDX19AQ9NUU7 478 aaKnown RBP17.56■□□□□ 0.4
ABR-228ENST00000574437 ELP1O95163 1332 aa17.56■□□□□ 0.4
ABR-228ENST00000574437 MARF1Q9Y4F3 1742 aaKnown RBP17.55■□□□□ 0.4
ABR-228ENST00000574437 CHGBP05060 677 aa17.55■□□□□ 0.4
ABR-228ENST00000574437 CCDC129Q6ZRS4 1044 aa17.55■□□□□ 0.4
ABR-228ENST00000574437 U2AF2P26368 475 aaKnown RBP eCLIP17.55■□□□□ 0.4
ABR-228ENST00000574437 FBXW7Q969H0 707 aa17.55■□□□□ 0.4
ABR-228ENST00000574437 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
ABR-228ENST00000574437 CLSTN2Q9H4D0 955 aa17.54■□□□□ 0.4
ABR-228ENST00000574437 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
ABR-228ENST00000574437 ZNF75DP51815 510 aa17.54■□□□□ 0.4
ABR-228ENST00000574437 BRINP3Q76B58 766 aa17.54■□□□□ 0.4
ABR-228ENST00000574437 GOLGA6L19H0YKK7 550 aa17.54■□□□□ 0.4
ABR-228ENST00000574437 TNNT1P13805 278 aa17.54■□□□□ 0.4
ABR-228ENST00000574437 SLC39A6Q13433 755 aa17.54■□□□□ 0.4
ABR-228ENST00000574437 TPD52L1Q16890 204 aaPredicted RBP17.53■□□□□ 0.4
ABR-228ENST00000574437 Q6ZUG5 572 aa17.53■□□□□ 0.4
ABR-228ENST00000574437 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
ABR-228ENST00000574437 SEC62Q99442 399 aaKnown RBP17.53■□□□□ 0.4
ABR-228ENST00000574437 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
ABR-228ENST00000574437 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
ABR-228ENST00000574437 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.4
ABR-228ENST00000574437 SLAIN2Q9P270 581 aa17.52■□□□□ 0.4
ABR-228ENST00000574437 A0A087WWV3 80 aa17.52■□□□□ 0.4
ABR-228ENST00000574437 TAF5LO75529 589 aa17.52■□□□□ 0.4
ABR-228ENST00000574437 PDIA4P13667 645 aaKnown RBP17.52■□□□□ 0.4
ABR-228ENST00000574437 MYD88Q99836 296 aa17.52■□□□□ 0.4
ABR-228ENST00000574437 NLRP2Q9NX02 1062 aa17.51■□□□□ 0.39
ABR-228ENST00000574437 IGSF3O75054 1194 aa17.51■□□□□ 0.39
ABR-228ENST00000574437 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
ABR-228ENST00000574437 FTOQ9C0B1 505 aaKnown RBP eCLIP17.51■□□□□ 0.39
ABR-228ENST00000574437 HMG20BQ9P0W2 317 aa17.51■□□□□ 0.39
ABR-228ENST00000574437 IGKV5-2P06315 115 aa17.5■□□□□ 0.39
ABR-228ENST00000574437 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
ABR-228ENST00000574437 CACTINQ8WUQ7 758 aaKnown RBP17.5■□□□□ 0.39
ABR-228ENST00000574437 NFAT5O94916 1531 aa17.5■□□□□ 0.39
ABR-228ENST00000574437 ZSCAN20P17040 1043 aaPredicted RBP17.5■□□□□ 0.39
ABR-228ENST00000574437 DDX46Q7L014 1031 aaKnown RBP17.5■□□□□ 0.39
ABR-228ENST00000574437 GTF3C6Q969F1 213 aa17.5■□□□□ 0.39
ABR-228ENST00000574437 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
ABR-228ENST00000574437 BECN2A8MW95 431 aa17.5■□□□□ 0.39
ABR-228ENST00000574437 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
ABR-228ENST00000574437 NAA30Q147X3 362 aaPredicted RBP17.5■□□□□ 0.39
ABR-228ENST00000574437 KRT32Q14532 448 aa17.49■□□□□ 0.39
ABR-228ENST00000574437 CCDC144BQ3MJ40 725 aa17.49■□□□□ 0.39
ABR-228ENST00000574437 FILIP1Q7Z7B0 1213 aa17.49■□□□□ 0.39
ABR-228ENST00000574437 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
ABR-228ENST00000574437 CSB-PGBD3P0DP91 1061 aa17.49■□□□□ 0.39
ABR-228ENST00000574437 CCT2P78371 535 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms