RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 DUSP27Q5VZP5 1158 aa27.73■■■□□ 2.03
UBFD1-210ENST00000571064 ELL2O00472 640 aaPredicted RBP27.72■■■□□ 2.03
UBFD1-210ENST00000571064 HOXA10P31260 410 aaPredicted RBP27.72■■■□□ 2.03
UBFD1-210ENST00000571064 EXOSC9Q06265 439 aaKnown RBP27.72■■■□□ 2.03
UBFD1-210ENST00000571064 MAP2K2P36507 400 aa27.7■■■□□ 2.02
UBFD1-210ENST00000571064 NIM1KQ8IY84 436 aa27.7■■■□□ 2.02
UBFD1-210ENST00000571064 GPTP24298 496 aa27.69■■■□□ 2.02
UBFD1-210ENST00000571064 YTHDC1Q96MU7 727 aaKnown RBP27.69■■■□□ 2.02
UBFD1-210ENST00000571064 ERVV-1B6SEH8 477 aa27.68■■■□□ 2.02
UBFD1-210ENST00000571064 PPEF1O14829 653 aaPredicted RBP27.68■■■□□ 2.02
UBFD1-210ENST00000571064 HOXB7P09629 217 aa27.68■■■□□ 2.02
UBFD1-210ENST00000571064 EIF2S2P20042 333 aaKnown RBP27.68■■■□□ 2.02
UBFD1-210ENST00000571064 GRIPAP1Q4V328 841 aa27.68■■■□□ 2.02
UBFD1-210ENST00000571064 TTLL7Q6ZT98 887 aa27.68■■■□□ 2.02
UBFD1-210ENST00000571064 RBM17Q96I25 401 aaKnown RBP27.68■■■□□ 2.02
UBFD1-210ENST00000571064 MAP3K15Q6ZN16 1313 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 UBN2Q6ZU65 1347 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 NUP98P52948 1817 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 PPIP5K2O43314 1243 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 SUSD4Q5VX71 490 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 C3orf67Q6ZVT6 689 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 SAPCD2Q86UD0 394 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 CRAMP1Q96RY5 1269 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 MCOLN1Q9GZU1 580 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 ADARB2Q9NS39 739 aaKnown RBP27.67■■■□□ 2.02
UBFD1-210ENST00000571064 GPRC5DQ9NZD1 345 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 RIC1Q4ADV7 1423 aa27.67■■■□□ 2.02
UBFD1-210ENST00000571064 CELF2O95319 508 aaKnown RBP27.66■■■□□ 2.02
UBFD1-210ENST00000571064 AOC3Q16853 763 aa27.66■■■□□ 2.02
UBFD1-210ENST00000571064 TWISTNBQ3B726 338 aaPredicted RBP27.66■■■□□ 2.02
UBFD1-210ENST00000571064 NECTIN2Q92692 538 aa27.66■■■□□ 2.02
UBFD1-210ENST00000571064 GLIS2Q9BZE0 524 aaPredicted RBP27.65■■■□□ 2.02
UBFD1-210ENST00000571064 VAMP4O75379 141 aa27.64■■■□□ 2.02
UBFD1-210ENST00000571064 PDIA6Q15084 440 aa27.64■■■□□ 2.02
UBFD1-210ENST00000571064 KIF6Q6ZMV9 814 aa27.64■■■□□ 2.02
UBFD1-210ENST00000571064 ZBTB3Q9H5J0 574 aa27.64■■■□□ 2.02
UBFD1-210ENST00000571064 CASP8AP2Q9UKL3 1982 aa27.63■■■□□ 2.01
UBFD1-210ENST00000571064 CXCL9Q07325 125 aa27.63■■■□□ 2.01
UBFD1-210ENST00000571064 HDGFL1Q5TGJ6 251 aa27.63■■■□□ 2.01
UBFD1-210ENST00000571064 IBTKQ9P2D0 1353 aaPredicted RBP27.62■■■□□ 2.01
UBFD1-210ENST00000571064 CA12O43570 354 aa27.62■■■□□ 2.01
UBFD1-210ENST00000571064 MYL6BP14649 208 aa27.62■■■□□ 2.01
UBFD1-210ENST00000571064 PROSER3Q2NL68 480 aa27.62■■■□□ 2.01
UBFD1-210ENST00000571064 NTSR2O95665 410 aa27.61■■■□□ 2.01
UBFD1-210ENST00000571064 GMPSP49915 693 aaPredicted RBP27.61■■■□□ 2.01
UBFD1-210ENST00000571064 LRP10Q7Z4F1 713 aa27.61■■■□□ 2.01
UBFD1-210ENST00000571064 ANXA1P04083 346 aa27.6■■■□□ 2.01
UBFD1-210ENST00000571064 BRPF1P55201 1214 aaPredicted RBP27.6■■■□□ 2.01
UBFD1-210ENST00000571064 ZNF34Q8IZ26 560 aa27.6■■■□□ 2.01
UBFD1-210ENST00000571064 ZNF408Q9H9D4 720 aa27.6■■■□□ 2.01
UBFD1-210ENST00000571064 ZNRF3Q9ULT6 936 aa27.6■■■□□ 2.01
UBFD1-210ENST00000571064 ERBB4Q15303 1308 aa27.6■■■□□ 2.01
UBFD1-210ENST00000571064 DGKZQ13574 1117 aa27.59■■■□□ 2.01
UBFD1-210ENST00000571064 CIAPIN1Q6FI81 312 aa27.59■■■□□ 2.01
UBFD1-210ENST00000571064 HHIPL1Q96JK4 782 aa27.59■■■□□ 2.01
UBFD1-210ENST00000571064 CHPF2Q9P2E5 772 aa27.59■■■□□ 2.01
UBFD1-210ENST00000571064 ATP6V0A2Q9Y487 856 aa27.59■■■□□ 2.01
UBFD1-210ENST00000571064 PGAP2Q9UHJ9 254 aa27.58■■■□□ 2.01
UBFD1-210ENST00000571064 HIRAP54198 1017 aaPredicted RBP27.57■■■□□ 2
UBFD1-210ENST00000571064 ZIC5Q96T25 663 aa27.57■■■□□ 2
UBFD1-210ENST00000571064 TMX4Q9H1E5 349 aaPredicted RBP27.57■■■□□ 2
UBFD1-210ENST00000571064 VPS33BQ9H267 617 aa27.57■■■□□ 2
UBFD1-210ENST00000571064 NLRP3Q96P20 1036 aa27.56■■■□□ 2
UBFD1-210ENST00000571064 PCDH10Q9P2E7 1040 aa27.56■■■□□ 2
UBFD1-210ENST00000571064 CCDC30Q5VVM6 783 aa27.55■■■□□ 2
UBFD1-210ENST00000571064 GIGYF2Q6Y7W6 1299 aaKnown RBP27.55■■■□□ 2
UBFD1-210ENST00000571064 RTFDC1Q9BY42 306 aaPredicted RBP27.55■■■□□ 2
UBFD1-210ENST00000571064 ABCC4O15439 1325 aa27.54■■■□□ 2
UBFD1-210ENST00000571064 RAD17O75943 681 aa27.54■■■□□ 2
UBFD1-210ENST00000571064 PPP1R42Q7Z4L9 355 aa27.54■■■□□ 2
UBFD1-210ENST00000571064 SUPT20HQ8NEM7 779 aa27.54■■■□□ 2
UBFD1-210ENST00000571064 TRPM4Q8TD43 1214 aa27.54■■■□□ 2
UBFD1-210ENST00000571064 BCL2L13Q9BXK5 485 aa27.54■■■□□ 2
UBFD1-210ENST00000571064 DBF4Q9UBU7 674 aaPredicted RBP27.54■■■□□ 2
UBFD1-210ENST00000571064 SHTN1A0MZ66 631 aa27.53■■■□□ 2
UBFD1-210ENST00000571064 ZC3H15Q8WU90 426 aaKnown RBP27.53■■■□□ 2
UBFD1-210ENST00000571064 DPP8Q6V1X1 898 aaPredicted RBP27.52■■■□□ 2
UBFD1-210ENST00000571064 CDC37L1Q7L3B6 337 aa27.52■■■□□ 2
UBFD1-210ENST00000571064 DLK2Q6UY11 383 aa27.51■■□□□ 1.99
UBFD1-210ENST00000571064 CDHR2Q9BYE9 1310 aa27.5■■□□□ 1.99
UBFD1-210ENST00000571064 KIAA2012Q0VF49 1180 aa27.5■■□□□ 1.99
UBFD1-210ENST00000571064 NOGQ13253 232 aa27.5■■□□□ 1.99
UBFD1-210ENST00000571064 PARP10Q53GL7 1025 aa27.5■■□□□ 1.99
UBFD1-210ENST00000571064 SLC10A5Q5PT55 438 aa27.5■■□□□ 1.99
UBFD1-210ENST00000571064 UTP14AQ9BVJ6 771 aaKnown RBP27.5■■□□□ 1.99
UBFD1-210ENST00000571064 USP48Q86UV5 1035 aa27.49■■□□□ 1.99
UBFD1-210ENST00000571064 SP8Q8IXZ3 490 aa27.49■■□□□ 1.99
UBFD1-210ENST00000571064 MPNDQ8N594 471 aa27.49■■□□□ 1.99
UBFD1-210ENST00000571064 XAGE3Q8WTP9 111 aa27.49■■□□□ 1.99
UBFD1-210ENST00000571064 PHAXQ9H814 394 aaKnown RBP27.49■■□□□ 1.99
UBFD1-210ENST00000571064 CNOT7Q9UIV1 285 aaKnown RBP27.49■■□□□ 1.99
UBFD1-210ENST00000571064 CT47B1P0C2W7 299 aaPredicted RBP27.48■■□□□ 1.99
UBFD1-210ENST00000571064 HUNKP57058 714 aa27.48■■□□□ 1.99
UBFD1-210ENST00000571064 TNIP1Q15025 636 aa27.48■■□□□ 1.99
UBFD1-210ENST00000571064 COPS6Q7L5N1 327 aa27.48■■□□□ 1.99
UBFD1-210ENST00000571064 G2E3Q7L622 706 aa27.48■■□□□ 1.99
UBFD1-210ENST00000571064 CHMP4AQ9BY43 222 aa27.48■■□□□ 1.99
UBFD1-210ENST00000571064 HYPKQ9NX55 129 aa27.48■■□□□ 1.99
UBFD1-210ENST00000571064 YDJCA8MPS7 323 aa27.47■■□□□ 1.99
UBFD1-210ENST00000571064 BBOX1O75936 387 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms