RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
SNX29-208ENST00000569801 ST18O60284 1047 aa11.3□□□□□ -0.6
SNX29-208ENST00000569801 FOSL2P15408 326 aa11.3□□□□□ -0.6
SNX29-208ENST00000569801 CRKLP46109 303 aaKnown RBP11.3□□□□□ -0.6
SNX29-208ENST00000569801 RTKN2Q8IZC4 609 aa11.3□□□□□ -0.6
SNX29-208ENST00000569801 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
SNX29-208ENST00000569801 ASB2Q96Q27 587 aa11.3□□□□□ -0.6
SNX29-208ENST00000569801 PTCH2Q9Y6C5 1203 aa11.3□□□□□ -0.6
SNX29-208ENST00000569801 EPG5Q9HCE0 2579 aa11.3□□□□□ -0.6
SNX29-208ENST00000569801 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
SNX29-208ENST00000569801 ATXN2LQ8WWM7 1075 aaKnown RBP11.29□□□□□ -0.6
SNX29-208ENST00000569801 ADM5C9JUS6 153 aa11.28□□□□□ -0.6
SNX29-208ENST00000569801 SRGNP10124 158 aa11.28□□□□□ -0.6
SNX29-208ENST00000569801 CAP1Q01518 475 aa11.28□□□□□ -0.6
SNX29-208ENST00000569801 SH3TC2Q8TF17 1288 aa11.28□□□□□ -0.6
SNX29-208ENST00000569801 NECAB3Q96P71 396 aaPredicted RBP11.28□□□□□ -0.6
SNX29-208ENST00000569801 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
SNX29-208ENST00000569801 SEMA6BQ9H3T3 888 aa11.28□□□□□ -0.6
SNX29-208ENST00000569801 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
SNX29-208ENST00000569801 SPG7Q9UQ90 795 aa11.28□□□□□ -0.6
SNX29-208ENST00000569801 ZNF609O15014 1411 aa11.27□□□□□ -0.6
SNX29-208ENST00000569801 MAGEA10P43363 369 aaPredicted RBP11.27□□□□□ -0.61
SNX29-208ENST00000569801 SREBF2Q12772 1141 aa11.27□□□□□ -0.61
SNX29-208ENST00000569801 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
SNX29-208ENST00000569801 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.61
SNX29-208ENST00000569801 MASTLQ96GX5 879 aa11.27□□□□□ -0.61
SNX29-208ENST00000569801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX29-208ENST00000569801 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.61
SNX29-208ENST00000569801 MRC1P22897 1456 aa11.26□□□□□ -0.61
SNX29-208ENST00000569801 SLX4Q8IY92 1834 aa11.26□□□□□ -0.61
SNX29-208ENST00000569801 FAM86C2PA6NEL3 165 aa11.26□□□□□ -0.61
SNX29-208ENST00000569801 PHKG2P15735 406 aa11.26□□□□□ -0.61
SNX29-208ENST00000569801 GMPSP49915 693 aaPredicted RBP11.26□□□□□ -0.61
SNX29-208ENST00000569801 MORC1Q86VD1 984 aa11.26□□□□□ -0.61
SNX29-208ENST00000569801 GPR37L1O60883 481 aa11.25□□□□□ -0.61
SNX29-208ENST00000569801 FARP2O94887 1054 aaPredicted RBP11.25□□□□□ -0.61
SNX29-208ENST00000569801 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
SNX29-208ENST00000569801 IFNL2Q8IZJ0 200 aa11.25□□□□□ -0.61
SNX29-208ENST00000569801 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
SNX29-208ENST00000569801 C11orf16Q9NQ32 467 aa11.25□□□□□ -0.61
SNX29-208ENST00000569801 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
SNX29-208ENST00000569801 NRXN2Q9P2S2 1712 aa11.25□□□□□ -0.61
SNX29-208ENST00000569801 ALDH1A1P00352 501 aa11.24□□□□□ -0.61
SNX29-208ENST00000569801 MTFR1Q15390 333 aa11.24□□□□□ -0.61
SNX29-208ENST00000569801 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
SNX29-208ENST00000569801 IL27Q8NEV9 243 aa11.24□□□□□ -0.61
SNX29-208ENST00000569801 COL4A5P29400 1685 aa11.24□□□□□ -0.61
SNX29-208ENST00000569801 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
SNX29-208ENST00000569801 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
SNX29-208ENST00000569801 ITGB8P26012 769 aa11.23□□□□□ -0.61
SNX29-208ENST00000569801 GJA8P48165 433 aa11.23□□□□□ -0.61
SNX29-208ENST00000569801 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
SNX29-208ENST00000569801 LARGE2Q8N3Y3 721 aa11.23□□□□□ -0.61
SNX29-208ENST00000569801 AFDNP55196 1824 aaKnown RBP11.23□□□□□ -0.61
SNX29-208ENST00000569801 SYN1P17600 705 aa11.22□□□□□ -0.61
SNX29-208ENST00000569801 MRPS5P82675 430 aaKnown RBP11.22□□□□□ -0.61
SNX29-208ENST00000569801 NARFQ9UHQ1 456 aa11.22□□□□□ -0.61
SNX29-208ENST00000569801 ZFHX4Q86UP3 3567 aa11.22□□□□□ -0.61
SNX29-208ENST00000569801 SHTN1A0MZ66 631 aa11.21□□□□□ -0.61
SNX29-208ENST00000569801 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
SNX29-208ENST00000569801 IL13P35225 146 aa11.21□□□□□ -0.61
SNX29-208ENST00000569801 ACAP1Q15027 740 aa11.21□□□□□ -0.61
SNX29-208ENST00000569801 PLEKHO1Q53GL0 409 aaPredicted RBP11.21□□□□□ -0.61
SNX29-208ENST00000569801 INTS5Q6P9B9 1019 aaKnown RBP11.21□□□□□ -0.61
SNX29-208ENST00000569801 ERMP1Q7Z2K6 904 aa11.21□□□□□ -0.61
SNX29-208ENST00000569801 C7orf61Q8IZ16 206 aa11.21□□□□□ -0.61
SNX29-208ENST00000569801 PSMD1Q99460 953 aa11.21□□□□□ -0.61
SNX29-208ENST00000569801 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.62
SNX29-208ENST00000569801 ZNF831Q5JPB2 1677 aa11.2□□□□□ -0.62
SNX29-208ENST00000569801 SP3Q02447 781 aa11.2□□□□□ -0.62
SNX29-208ENST00000569801 ZNF530Q6P9A1 599 aaPredicted RBP11.2□□□□□ -0.62
SNX29-208ENST00000569801 MOB2Q70IA6 237 aa11.2□□□□□ -0.62
SNX29-208ENST00000569801 DCPSQ96C86 337 aaKnown RBP11.2□□□□□ -0.62
SNX29-208ENST00000569801 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
SNX29-208ENST00000569801 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
SNX29-208ENST00000569801 COL5A3P25940 1745 aaPredicted RBP11.2□□□□□ -0.62
SNX29-208ENST00000569801 TRANK1O15050 2925 aa11.19□□□□□ -0.62
SNX29-208ENST00000569801 SETXQ7Z333 2677 aaKnown RBP11.19□□□□□ -0.62
SNX29-208ENST00000569801 ERVV-2B6SEH9 535 aa11.19□□□□□ -0.62
SNX29-208ENST00000569801 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
SNX29-208ENST00000569801 AMOTQ4VCS5 1084 aa11.19□□□□□ -0.62
SNX29-208ENST00000569801 SULT6B1Q6IMI4 303 aa11.19□□□□□ -0.62
SNX29-208ENST00000569801 NIM1KQ8IY84 436 aa11.19□□□□□ -0.62
SNX29-208ENST00000569801 CDCA5Q96FF9 252 aa11.19□□□□□ -0.62
SNX29-208ENST00000569801 BCL2L13Q9BXK5 485 aa11.19□□□□□ -0.62
SNX29-208ENST00000569801 THEGQ9P2T0 379 aa11.19□□□□□ -0.62
SNX29-208ENST00000569801 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
SNX29-208ENST00000569801 UBE2Q2LH0YL09 131 aa11.18□□□□□ -0.62
SNX29-208ENST00000569801 GJB1P08034 283 aa11.18□□□□□ -0.62
SNX29-208ENST00000569801 MTHFSP49914 203 aa11.18□□□□□ -0.62
SNX29-208ENST00000569801 FKBP1BP68106 108 aa11.18□□□□□ -0.62
SNX29-208ENST00000569801 CXCL9Q07325 125 aa11.18□□□□□ -0.62
SNX29-208ENST00000569801 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
SNX29-208ENST00000569801 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
SNX29-208ENST00000569801 TTYH1Q9H313 450 aaPredicted RBP11.18□□□□□ -0.62
SNX29-208ENST00000569801 CNOT7Q9UIV1 285 aaKnown RBP11.18□□□□□ -0.62
SNX29-208ENST00000569801 COL11A2P13942 1736 aaPredicted RBP11.18□□□□□ -0.62
SNX29-208ENST00000569801 CFAP54Q96N23 3096 aa11.17□□□□□ -0.62
SNX29-208ENST00000569801 COL3A1P02461 1466 aaPredicted RBP11.17□□□□□ -0.62
SNX29-208ENST00000569801 ANKRD11Q6UB99 2663 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms