RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CHMP4CQ96CF2 233 aa8□□□□□ -1.13
SMG1-217ENST00000569764 ZHX1Q9UKY1 873 aaPredicted RBP8□□□□□ -1.13
SMG1-217ENST00000569764 TMA7Q9Y2S6 64 aaKnown RBP8□□□□□ -1.13
SMG1-217ENST00000569764 TECPR2O15040 1411 aa8□□□□□ -1.13
SMG1-217ENST00000569764 GYS2P54840 703 aa8□□□□□ -1.13
SMG1-217ENST00000569764 RRP1P56182 461 aaKnown RBP8□□□□□ -1.13
SMG1-217ENST00000569764 PUS10Q3MIT2 529 aaKnown RBP8□□□□□ -1.13
SMG1-217ENST00000569764 NUB1Q9Y5A7 615 aa8□□□□□ -1.13
SMG1-217ENST00000569764 CPSF1Q10570 1443 aaKnown RBP7.99□□□□□ -1.13
SMG1-217ENST00000569764 TRIM66O15016 1216 aa7.99□□□□□ -1.13
SMG1-217ENST00000569764 PTPROQ16827 1216 aa7.99□□□□□ -1.13
SMG1-217ENST00000569764 TAF3Q5VWG9 929 aa7.99□□□□□ -1.13
SMG1-217ENST00000569764 VPS37DQ86XT2 251 aa7.99□□□□□ -1.13
SMG1-217ENST00000569764 AKAP12Q02952 1782 aa7.99□□□□□ -1.13
SMG1-217ENST00000569764 EZH2Q15910 746 aaKnown RBP7.99□□□□□ -1.13
SMG1-217ENST00000569764 NME9Q86XW9 330 aa7.99□□□□□ -1.13
SMG1-217ENST00000569764 CALR3Q96L12 384 aaKnown RBP7.99□□□□□ -1.13
SMG1-217ENST00000569764 MPHOSPH10O00566 681 aaKnown RBP7.99□□□□□ -1.13
SMG1-217ENST00000569764 TTLL12Q14166 644 aaPredicted RBP7.99□□□□□ -1.13
SMG1-217ENST00000569764 DHX38Q92620 1227 aaKnown RBP7.99□□□□□ -1.13
SMG1-217ENST00000569764 PPP4R2Q9NY27 417 aa7.99□□□□□ -1.13
SMG1-217ENST00000569764 CPDO75976 1380 aa7.99□□□□□ -1.13
SMG1-217ENST00000569764 PHLPP1O60346 1717 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 MON2Q7Z3U7 1717 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 H7C1D1 291 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 TGFB2P61812 414 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 SLFN5Q08AF3 891 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 MAMSTRQ6ZN01 415 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 EP400NLQ6ZTU2 488 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 NLRP3Q96P20 1036 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 MKRN1Q9UHC7 482 aaKnown RBP7.98□□□□□ -1.13
SMG1-217ENST00000569764 UTRNP46939 3433 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 GNAT3A8MTJ3 354 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 PTCD1O75127 700 aaKnown RBP7.98□□□□□ -1.13
SMG1-217ENST00000569764 OGFOD1Q8N543 542 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 MAF1Q9H063 256 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 NRBP1Q9UHY1 535 aa7.98□□□□□ -1.13
SMG1-217ENST00000569764 GTF2F1P35269 517 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMG1-217ENST00000569764 TCIRG1Q13488 830 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 TSNAXIP1Q2TAA8 658 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 AKAP4Q5JQC9 854 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 CNBD1Q8NA66 436 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 RBM17Q96I25 401 aaKnown RBP7.97□□□□□ -1.13
SMG1-217ENST00000569764 PLEKHF1Q96S99 279 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 TOPAZ1Q8N9V7 1692 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 IBSPP21815 317 aaPredicted RBP7.97□□□□□ -1.13
SMG1-217ENST00000569764 TDO2P48775 406 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 PARP10Q53GL7 1025 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 SULT6B1Q6IMI4 303 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 RTKN2Q8IZC4 609 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 SSH2Q76I76 1423 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 HTATSF1O43719 755 aaKnown RBP7.97□□□□□ -1.13
SMG1-217ENST00000569764 BCAR3O75815 825 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 TNIP1Q15025 636 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 NIM1KQ8IY84 436 aa7.97□□□□□ -1.13
SMG1-217ENST00000569764 RBM47A0AV96 593 aaKnown RBP7.96□□□□□ -1.13
SMG1-217ENST00000569764 WDR75Q8IWA0 830 aaKnown RBP7.96□□□□□ -1.13
SMG1-217ENST00000569764 TANGO6Q9C0B7 1094 aa7.96□□□□□ -1.13
SMG1-217ENST00000569764 TCEAL9Q9UHQ7 104 aa7.96□□□□□ -1.13
SMG1-217ENST00000569764 NRKQ7Z2Y5 1582 aa7.96□□□□□ -1.13
SMG1-217ENST00000569764 LNPKQ9C0E8 428 aa7.96□□□□□ -1.13
SMG1-217ENST00000569764 POLKQ9UBT6 870 aa7.96□□□□□ -1.13
SMG1-217ENST00000569764 EMILIN1Q9Y6C2 1016 aa7.96□□□□□ -1.13
SMG1-217ENST00000569764 LRRFIP1Q32MZ4 808 aaKnown RBP7.96□□□□□ -1.14
SMG1-217ENST00000569764 TTLL6Q8N841 843 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 PAIP2Q9BPZ3 127 aaKnown RBP7.96□□□□□ -1.14
SMG1-217ENST00000569764 PAGR1Q9BTK6 254 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 TNNQ9UQP3 1299 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 NWD1Q149M9 1564 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 FANCIQ9NVI1 1328 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 CDC42BPGQ6DT37 1551 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 SNRPA1P09661 255 aaKnown RBP7.96□□□□□ -1.14
SMG1-217ENST00000569764 TAGLNQ01995 201 aaKnown RBP7.96□□□□□ -1.14
SMG1-217ENST00000569764 KIF22Q14807 665 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 SMC1BQ8NDV3 1235 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 RNF217Q8TC41 542 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 CCDC34Q96HJ3 373 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 SFMBT1Q9UHJ3 866 aa7.96□□□□□ -1.14
SMG1-217ENST00000569764 PRR29P0C7W0 189 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 BICDL1Q6ZP65 573 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 RRM1P23921 792 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 HOXC9P31274 260 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 CCDC93Q567U6 631 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 RIC3Q7Z5B4 369 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 FMNL3Q8IVF7 1028 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 SPACA7Q96KW9 195 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 CDC5LQ99459 802 aaKnown RBP7.95□□□□□ -1.14
SMG1-217ENST00000569764 USP6P35125 1406 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 ITSN1Q15811 1721 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 BTBD11A6QL63 1104 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 RRS1Q15050 365 aaKnown RBP7.95□□□□□ -1.14
SMG1-217ENST00000569764 PNMA8AQ86V59 439 aaPredicted RBP7.95□□□□□ -1.14
SMG1-217ENST00000569764 CRBNQ96SW2 442 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 TSPYL4Q9UJ04 414 aa7.95□□□□□ -1.14
SMG1-217ENST00000569764 XRN1Q8IZH2 1706 aaKnown RBP7.95□□□□□ -1.14
SMG1-217ENST00000569764 PEAK1Q9H792 1746 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms