RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 MAGEB6P1A0A0J9YX57 407 aa8.77□□□□□ -1.01
LINC00556-201ENST00000569603 BMP2P12643 396 aa8.77□□□□□ -1.01
LINC00556-201ENST00000569603 BAG6P46379 1132 aa8.77□□□□□ -1.01
LINC00556-201ENST00000569603 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
LINC00556-201ENST00000569603 HELBQ8NG08 1087 aaPredicted RBP8.77□□□□□ -1.01
LINC00556-201ENST00000569603 PARD3Q8TEW0 1356 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 ABCC6O95255 1503 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
LINC00556-201ENST00000569603 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 FAM196AQ6ZSG2 479 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 NLRP13Q86W25 1043 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 TRMT44Q8IYL2 757 aaKnown RBP8.76□□□□□ -1.01
LINC00556-201ENST00000569603 TCP11L2Q8N4U5 519 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 ARMC2Q8NEN0 867 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 CARD14Q9BXL6 1004 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 DNMT3LQ9UJW3 386 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 MAP4K5Q9Y4K4 846 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 BCL9O00512 1426 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 CRB1P82279 1406 aa8.76□□□□□ -1.01
LINC00556-201ENST00000569603 SF3B2Q13435 895 aaKnown RBP8.75□□□□□ -1.01
LINC00556-201ENST00000569603 VASH1Q7L8A9 365 aaPredicted RBP8.75□□□□□ -1.01
LINC00556-201ENST00000569603 ARHGEF25Q86VW2 580 aa8.75□□□□□ -1.01
LINC00556-201ENST00000569603 STRN4Q9NRL3 753 aa8.75□□□□□ -1.01
LINC00556-201ENST00000569603 THRAP3Q9Y2W1 955 aaKnown RBP8.75□□□□□ -1.01
LINC00556-201ENST00000569603 TTC21BQ7Z4L5 1316 aa8.75□□□□□ -1.01
LINC00556-201ENST00000569603 EVC2Q86UK5 1308 aa8.75□□□□□ -1.01
LINC00556-201ENST00000569603 ROCK2O75116 1388 aaKnown RBP8.74□□□□□ -1.01
LINC00556-201ENST00000569603 PPFIA3O75145 1194 aa8.74□□□□□ -1.01
LINC00556-201ENST00000569603 TRIM37O94972 964 aa8.74□□□□□ -1.01
LINC00556-201ENST00000569603 EZH2Q15910 746 aaKnown RBP8.74□□□□□ -1.01
LINC00556-201ENST00000569603 POLR3EQ9NVU0 708 aa8.74□□□□□ -1.01
LINC00556-201ENST00000569603 USP31Q70CQ4 1352 aa8.73□□□□□ -1.01
LINC00556-201ENST00000569603 ERFEQ4G0M1 354 aa8.73□□□□□ -1.01
LINC00556-201ENST00000569603 UPP2O95045 317 aa8.72□□□□□ -1.01
LINC00556-201ENST00000569603 HMGB1P09429 215 aaKnown RBP8.72□□□□□ -1.01
LINC00556-201ENST00000569603 CDK11BP21127 795 aaKnown RBP8.72□□□□□ -1.01
LINC00556-201ENST00000569603 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
LINC00556-201ENST00000569603 CCDC116Q8IYX3 515 aa8.72□□□□□ -1.01
LINC00556-201ENST00000569603 USP35Q9P2H5 1018 aa8.72□□□□□ -1.01
LINC00556-201ENST00000569603 WDR17Q8IZU2 1322 aa8.72□□□□□ -1.01
LINC00556-201ENST00000569603 TTC21AQ8NDW8 1320 aa8.72□□□□□ -1.01
LINC00556-201ENST00000569603 OVOS2A0A0G2JMS6 1433 aa8.71□□□□□ -1.01
LINC00556-201ENST00000569603 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.01
LINC00556-201ENST00000569603 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.01
LINC00556-201ENST00000569603 EVA1CP58658 441 aa8.71□□□□□ -1.02
LINC00556-201ENST00000569603 R3HDM1Q15032 1099 aaKnown RBP8.71□□□□□ -1.02
LINC00556-201ENST00000569603 PTF1AQ7RTS3 328 aa8.71□□□□□ -1.02
LINC00556-201ENST00000569603 EMILIN1Q9Y6C2 1016 aa8.71□□□□□ -1.02
LINC00556-201ENST00000569603 LTN1O94822 1766 aa8.71□□□□□ -1.02
LINC00556-201ENST00000569603 CASZ1Q86V15 1759 aa8.71□□□□□ -1.02
LINC00556-201ENST00000569603 MARCH10Q8NA82 808 aaPredicted RBP8.7□□□□□ -1.02
LINC00556-201ENST00000569603 LRRN4Q8WUT4 740 aa8.7□□□□□ -1.02
LINC00556-201ENST00000569603 TESK2Q96S53 571 aa8.7□□□□□ -1.02
LINC00556-201ENST00000569603 KTN1Q86UP2 1357 aaKnown RBP8.7□□□□□ -1.02
LINC00556-201ENST00000569603 APBA3O96018 575 aa8.69□□□□□ -1.02
LINC00556-201ENST00000569603 CBLBQ13191 982 aa8.69□□□□□ -1.02
LINC00556-201ENST00000569603 PDE3BQ13370 1112 aa8.69□□□□□ -1.02
LINC00556-201ENST00000569603 NEUROD1Q13562 356 aa8.69□□□□□ -1.02
LINC00556-201ENST00000569603 PPP1R26Q5T8A7 1209 aaPredicted RBP8.69□□□□□ -1.02
LINC00556-201ENST00000569603 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
LINC00556-201ENST00000569603 PUS7Q96PZ0 661 aaKnown RBP8.69□□□□□ -1.02
LINC00556-201ENST00000569603 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
LINC00556-201ENST00000569603 CARD10Q9BWT7 1032 aa8.69□□□□□ -1.02
LINC00556-201ENST00000569603 PLSCR1O15162 318 aa8.68□□□□□ -1.02
LINC00556-201ENST00000569603 KCNH5Q8NCM2 988 aa8.68□□□□□ -1.02
LINC00556-201ENST00000569603 RSPH6AQ9H0K4 717 aa8.68□□□□□ -1.02
LINC00556-201ENST00000569603 A0A1W2PP64 1363 aa8.68□□□□□ -1.02
LINC00556-201ENST00000569603 TNS2Q63HR2 1409 aa8.68□□□□□ -1.02
LINC00556-201ENST00000569603 EDC4Q6P2E9 1401 aaKnown RBP8.68□□□□□ -1.02
LINC00556-201ENST00000569603 NHSQ6T4R5 1651 aa8.68□□□□□ -1.02
LINC00556-201ENST00000569603 LOC100996750A0A140TA64 210 aa8.67□□□□□ -1.02
LINC00556-201ENST00000569603 TTLL8A6PVC2 850 aa8.67□□□□□ -1.02
LINC00556-201ENST00000569603 KRT76Q01546 638 aa8.67□□□□□ -1.02
LINC00556-201ENST00000569603 PAPPAQ13219 1627 aa8.67□□□□□ -1.02
LINC00556-201ENST00000569603 NME9Q86XW9 330 aa8.67□□□□□ -1.02
LINC00556-201ENST00000569603 GPR161Q8N6U8 529 aaKnown RBP8.67□□□□□ -1.02
LINC00556-201ENST00000569603 CDCA7Q9BWT1 371 aaPredicted RBP8.67□□□□□ -1.02
LINC00556-201ENST00000569603 KRTAP4-6Q9BYQ5 205 aa8.67□□□□□ -1.02
LINC00556-201ENST00000569603 CCDC7Q96M83 1385 aa8.66□□□□□ -1.02
LINC00556-201ENST00000569603 FIGNL2A6NMB9 653 aa8.66□□□□□ -1.02
LINC00556-201ENST00000569603 DDB1Q16531 1140 aa8.66□□□□□ -1.02
LINC00556-201ENST00000569603 TOM1L2Q6ZVM7 507 aa8.66□□□□□ -1.02
LINC00556-201ENST00000569603 ARHGAP9Q9BRR9 750 aa8.66□□□□□ -1.02
LINC00556-201ENST00000569603 CARD11Q9BXL7 1154 aa8.66□□□□□ -1.02
LINC00556-201ENST00000569603 SLC12A5Q9H2X9 1139 aa8.66□□□□□ -1.02
LINC00556-201ENST00000569603 SHANK3Q9BYB0 1731 aa8.66□□□□□ -1.02
LINC00556-201ENST00000569603 FAM208AQ9UK61 1670 aaKnown RBP8.65□□□□□ -1.02
LINC00556-201ENST00000569603 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
LINC00556-201ENST00000569603 PTSQ03393 145 aa8.65□□□□□ -1.02
LINC00556-201ENST00000569603 NR6A1Q15406 480 aa8.65□□□□□ -1.02
LINC00556-201ENST00000569603 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.65□□□□□ -1.02
LINC00556-201ENST00000569603 PDXDC2PQ6P474 469 aa8.65□□□□□ -1.02
LINC00556-201ENST00000569603 Q6ZVU0 165 aa8.65□□□□□ -1.02
LINC00556-201ENST00000569603 OCSTAMPQ9BR26 566 aa8.65□□□□□ -1.02
LINC00556-201ENST00000569603 FKBPLQ9UIM3 349 aa8.65□□□□□ -1.02
LINC00556-201ENST00000569603 NINLQ9Y2I6 1382 aa8.64□□□□□ -1.03
LINC00556-201ENST00000569603 BTAF1O14981 1849 aa8.64□□□□□ -1.03
LINC00556-201ENST00000569603 CEP350Q5VT06 3117 aa8.64□□□□□ -1.03
LINC00556-201ENST00000569603 SLC10A4Q96EP9 437 aa8.64□□□□□ -1.03
LINC00556-201ENST00000569603 KCTD15Q96SI1 283 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms