RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 BICC1Q9H694 974 aaKnown RBP9.62□□□□□ -0.87
SCAPER-221ENST00000568549 KIAA1551Q9HCM1 1747 aa9.62□□□□□ -0.87
SCAPER-221ENST00000568549 LRP5O75197 1615 aa9.61□□□□□ -0.87
SCAPER-221ENST00000568549 FOXO4P98177 505 aa9.61□□□□□ -0.87
SCAPER-221ENST00000568549 EPHA10Q5JZY3 1008 aa9.61□□□□□ -0.87
SCAPER-221ENST00000568549 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
SCAPER-221ENST00000568549 NLRP3Q96P20 1036 aa9.61□□□□□ -0.87
SCAPER-221ENST00000568549 BRIP1Q9BX63 1249 aa9.61□□□□□ -0.87
SCAPER-221ENST00000568549 PDE6BP35913 854 aa9.6□□□□□ -0.87
SCAPER-221ENST00000568549 RABL6Q3YEC7 729 aaPredicted RBP9.6□□□□□ -0.87
SCAPER-221ENST00000568549 CCDC152Q4G0S7 254 aa9.6□□□□□ -0.87
SCAPER-221ENST00000568549 LMBR1LQ6UX01 489 aa9.6□□□□□ -0.87
SCAPER-221ENST00000568549 C3orf67Q6ZVT6 689 aa9.6□□□□□ -0.87
SCAPER-221ENST00000568549 ANKRD44Q8N8A2 993 aa9.6□□□□□ -0.87
SCAPER-221ENST00000568549 CHMP3Q9Y3E7 222 aa9.6□□□□□ -0.87
SCAPER-221ENST00000568549 BRCA1P38398 1863 aaKnown RBP9.59□□□□□ -0.87
SCAPER-221ENST00000568549 CSF1RP07333 972 aa9.59□□□□□ -0.87
SCAPER-221ENST00000568549 SF3B3Q15393 1217 aaKnown RBP9.59□□□□□ -0.87
SCAPER-221ENST00000568549 CEP85Q6P2H3 762 aa9.59□□□□□ -0.87
SCAPER-221ENST00000568549 TTLL11Q8NHH1 800 aa9.59□□□□□ -0.87
SCAPER-221ENST00000568549 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
SCAPER-221ENST00000568549 A0A1B0GUL6 1792 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 KLRG2A4D1S0 409 aaPredicted RBP9.58□□□□□ -0.88
SCAPER-221ENST00000568549 SRGAP3O43295 1099 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 CAPN15O75808 1086 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 DSG3P32926 999 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 ATP8B2P98198 1209 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 MTX1Q13505 466 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 CCDC57Q2TAC2 916 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 FAM161AQ3B820 660 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 CRY2Q49AN0 593 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 C2CD5Q86YS7 1000 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 RPAP2Q8IXW5 612 aaPredicted RBP9.58□□□□□ -0.88
SCAPER-221ENST00000568549 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 RPGRQ92834 1020 aaKnown RBP9.58□□□□□ -0.88
SCAPER-221ENST00000568549 GREM2Q9H772 168 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 PPP1R1BQ9UD71 204 aaPredicted RBP9.58□□□□□ -0.88
SCAPER-221ENST00000568549 PDZRN3Q9UPQ7 1066 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 RTL9Q8NET4 1388 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 COL4A1P02462 1669 aa9.58□□□□□ -0.88
SCAPER-221ENST00000568549 PNMA6EA0A0J9YXQ4 647 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 ANKRD18BA2A2Z9 1011 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 H0YIN7 160 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 HMMRO75330 724 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 SRGNP10124 158 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 NPR1P16066 1061 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 ITGA6P23229 1130 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 IFIT5Q13325 482 aaKnown RBP9.57□□□□□ -0.88
SCAPER-221ENST00000568549 ERICH6BQ5W0A0 696 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 DDX46Q7L014 1031 aaKnown RBP9.57□□□□□ -0.88
SCAPER-221ENST00000568549 RBM17Q96I25 401 aaKnown RBP9.57□□□□□ -0.88
SCAPER-221ENST00000568549 PCDHB15Q9Y5E8 787 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 CD2APQ9Y5K6 639 aa9.57□□□□□ -0.88
SCAPER-221ENST00000568549 LRRC37AA6NMS7 1700 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 SLX4Q8IY92 1834 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 CHRNA5P30532 468 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 TGFB2P61812 414 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 POLA2Q14181 598 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 TAF7LQ5H9L4 462 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 STYK1Q6J9G0 422 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 SIRT2Q8IXJ6 389 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 SSH3Q8TE77 659 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 ZNF622Q969S3 477 aaKnown RBP eCLIP9.56□□□□□ -0.884e-6■■□□□ 13.5
SCAPER-221ENST00000568549 MASTLQ96GX5 879 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 CDC5LQ99459 802 aaKnown RBP9.56□□□□□ -0.88
SCAPER-221ENST00000568549 SEC31BQ9NQW1 1179 aa9.56□□□□□ -0.88
SCAPER-221ENST00000568549 ARFGEF1Q9Y6D6 1849 aa9.55□□□□□ -0.88
SCAPER-221ENST00000568549 DPEP1P16444 411 aa9.55□□□□□ -0.88
SCAPER-221ENST00000568549 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
SCAPER-221ENST00000568549 IGHMBP2P38935 993 aaKnown RBP9.55□□□□□ -0.88
SCAPER-221ENST00000568549 RFX5P48382 616 aaPredicted RBP9.55□□□□□ -0.88
SCAPER-221ENST00000568549 GRAPQ13588 217 aa9.55□□□□□ -0.88
SCAPER-221ENST00000568549 ANKRD18AQ8IVF6 992 aa9.55□□□□□ -0.88
SCAPER-221ENST00000568549 GRAPLQ8TC17 118 aaPredicted RBP9.55□□□□□ -0.88
SCAPER-221ENST00000568549 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
SCAPER-221ENST00000568549 CRAMP1Q96RY5 1269 aa9.55□□□□□ -0.88
SCAPER-221ENST00000568549 FHDC1Q9C0D6 1143 aaPredicted RBP9.55□□□□□ -0.88
SCAPER-221ENST00000568549 A0A0G2JLW4 131 aa9.54□□□□□ -0.88
SCAPER-221ENST00000568549 ALDH1B1P30837 517 aa9.54□□□□□ -0.88
SCAPER-221ENST00000568549 PTPN12Q05209 780 aaKnown RBP9.54□□□□□ -0.88
SCAPER-221ENST00000568549 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
SCAPER-221ENST00000568549 KLHDC4Q8TBB5 520 aa9.54□□□□□ -0.88
SCAPER-221ENST00000568549 CELF1Q92879 486 aaKnown RBP9.54□□□□□ -0.88
SCAPER-221ENST00000568549 MPHOSPH8Q99549 860 aa9.54□□□□□ -0.88
SCAPER-221ENST00000568549 SIL1Q9H173 461 aa9.54□□□□□ -0.88
SCAPER-221ENST00000568549 PA2G4Q9UQ80 394 aaKnown RBP9.54□□□□□ -0.88
SCAPER-221ENST00000568549 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
SCAPER-221ENST00000568549 RPS8P62241 208 aaKnown RBP9.53□□□□□ -0.88
SCAPER-221ENST00000568549 LDHAL6AQ6ZMR3 332 aa9.53□□□□□ -0.88
SCAPER-221ENST00000568549 NLGN2Q8NFZ4 835 aa9.53□□□□□ -0.88
SCAPER-221ENST00000568549 CNKSR1Q969H4 720 aa9.53□□□□□ -0.88
SCAPER-221ENST00000568549 RWDD1Q9H446 243 aaPredicted RBP9.53□□□□□ -0.88
SCAPER-221ENST00000568549 COPRSQ9NQ92 184 aa9.53□□□□□ -0.88
SCAPER-221ENST00000568549 CNNM1Q9NRU3 951 aa9.53□□□□□ -0.88
SCAPER-221ENST00000568549 PPP4R2Q9NY27 417 aa9.53□□□□□ -0.88
SCAPER-221ENST00000568549 PIM2Q9P1W9 311 aa9.53□□□□□ -0.88
SCAPER-221ENST00000568549 EYA2O00167 538 aa9.52□□□□□ -0.89
SCAPER-221ENST00000568549 SURF6O75683 361 aaKnown RBP9.52□□□□□ -0.89
SCAPER-221ENST00000568549 BBOX1O75936 387 aa9.52□□□□□ -0.89
SCAPER-221ENST00000568549 CIAO1O76071 339 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms