RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 KIF13BQ9NQT8 1826 aa17.83■□□□□ 0.44
KLHDC4-222ENST00000568444 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
KLHDC4-222ENST00000568444 RABL6Q3YEC7 729 aaPredicted RBP17.82■□□□□ 0.44
KLHDC4-222ENST00000568444 C2CD5Q86YS7 1000 aa17.82■□□□□ 0.44
KLHDC4-222ENST00000568444 GREM2Q9H772 168 aa17.82■□□□□ 0.44
KLHDC4-222ENST00000568444 H0YIN7 160 aa17.81■□□□□ 0.44
KLHDC4-222ENST00000568444 SRGAP3O43295 1099 aa17.81■□□□□ 0.44
KLHDC4-222ENST00000568444 CSF1RP07333 972 aa17.81■□□□□ 0.44
KLHDC4-222ENST00000568444 SF3B3Q15393 1217 aaKnown RBP17.81■□□□□ 0.44
KLHDC4-222ENST00000568444 CCDC57Q2TAC2 916 aa17.81■□□□□ 0.44
KLHDC4-222ENST00000568444 CEP85Q6P2H3 762 aa17.81■□□□□ 0.44
KLHDC4-222ENST00000568444 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
KLHDC4-222ENST00000568444 LRP5O75197 1615 aa17.8■□□□□ 0.44
KLHDC4-222ENST00000568444 ITGA6P23229 1130 aa17.8■□□□□ 0.44
KLHDC4-222ENST00000568444 CHRNA5P30532 468 aa17.8■□□□□ 0.44
KLHDC4-222ENST00000568444 CRY2Q49AN0 593 aa17.8■□□□□ 0.44
KLHDC4-222ENST00000568444 TAF7LQ5H9L4 462 aa17.8■□□□□ 0.44
KLHDC4-222ENST00000568444 RBM17Q96I25 401 aaKnown RBP17.8■□□□□ 0.44
KLHDC4-222ENST00000568444 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
KLHDC4-222ENST00000568444 CD2APQ9Y5K6 639 aa17.8■□□□□ 0.44
KLHDC4-222ENST00000568444 ANKRD18BA2A2Z9 1011 aa17.79■□□□□ 0.44
KLHDC4-222ENST00000568444 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
KLHDC4-222ENST00000568444 NPR1P16066 1061 aa17.79■□□□□ 0.44
KLHDC4-222ENST00000568444 IFIT5Q13325 482 aaKnown RBP17.79■□□□□ 0.44
KLHDC4-222ENST00000568444 RPAP2Q8IXW5 612 aaPredicted RBP17.79■□□□□ 0.44
KLHDC4-222ENST00000568444 ZNF622Q969S3 477 aaKnown RBP eCLIP17.79■□□□□ 0.44
KLHDC4-222ENST00000568444 RTL9Q8NET4 1388 aa17.79■□□□□ 0.44
KLHDC4-222ENST00000568444 PNMA6EA0A0J9YXQ4 647 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 SRGNP10124 158 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 TGFB2P61812 414 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 ATP8B2P98198 1209 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 MTX1Q13505 466 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 MASTLQ96GX5 879 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 SEC31BQ9NQW1 1179 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 PCDHB15Q9Y5E8 787 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 DLEC1Q9Y238 1755 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
KLHDC4-222ENST00000568444 SPEF2Q9C093 1822 aa17.77■□□□□ 0.44
KLHDC4-222ENST00000568444 A0A0G2JLW4 131 aa17.77■□□□□ 0.44
KLHDC4-222ENST00000568444 HMMRO75330 724 aa17.77■□□□□ 0.44
KLHDC4-222ENST00000568444 DPEP1P16444 411 aa17.77■□□□□ 0.44
KLHDC4-222ENST00000568444 CDC5LQ99459 802 aaKnown RBP17.77■□□□□ 0.44
KLHDC4-222ENST00000568444 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.44
KLHDC4-222ENST00000568444 CACNA1SQ13698 1873 aa17.77■□□□□ 0.43
KLHDC4-222ENST00000568444 STYK1Q6J9G0 422 aa17.76■□□□□ 0.43
KLHDC4-222ENST00000568444 ZNF594Q96JF6 807 aaPredicted RBP17.76■□□□□ 0.43
KLHDC4-222ENST00000568444 ALDH1B1P30837 517 aa17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 HOXA10P31260 410 aaPredicted RBP17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 IGHMBP2P38935 993 aaKnown RBP17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 GRAPQ13588 217 aa17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 ANKRD18AQ8IVF6 992 aa17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 NLGN2Q8NFZ4 835 aa17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 KLHDC4Q8TBB5 520 aa17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 GRAPLQ8TC17 118 aaPredicted RBP17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 SSH3Q8TE77 659 aa17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 TAF1P21675 1872 aa17.75■□□□□ 0.43
KLHDC4-222ENST00000568444 COL4A1P02462 1669 aa17.74■□□□□ 0.43
KLHDC4-222ENST00000568444 POLA2Q14181 598 aa17.74■□□□□ 0.43
KLHDC4-222ENST00000568444 SIRT2Q8IXJ6 389 aa17.74■□□□□ 0.43
KLHDC4-222ENST00000568444 CNKSR1Q969H4 720 aa17.74■□□□□ 0.43
KLHDC4-222ENST00000568444 CRAMP1Q96RY5 1269 aa17.74■□□□□ 0.43
KLHDC4-222ENST00000568444 MPHOSPH8Q99549 860 aa17.74■□□□□ 0.43
KLHDC4-222ENST00000568444 SIL1Q9H173 461 aa17.74■□□□□ 0.43
KLHDC4-222ENST00000568444 PA2G4Q9UQ80 394 aaKnown RBP17.74■□□□□ 0.43
KLHDC4-222ENST00000568444 RFX5P48382 616 aaPredicted RBP17.73■□□□□ 0.43
KLHDC4-222ENST00000568444 PTPN12Q05209 780 aaKnown RBP17.73■□□□□ 0.43
KLHDC4-222ENST00000568444 ERICH6BQ5W0A0 696 aa17.73■□□□□ 0.43
KLHDC4-222ENST00000568444 WWC3Q9ULE0 1092 aa17.73■□□□□ 0.43
KLHDC4-222ENST00000568444 PPEF1O14829 653 aaPredicted RBP17.72■□□□□ 0.43
KLHDC4-222ENST00000568444 RPS8P62241 208 aaKnown RBP17.72■□□□□ 0.43
KLHDC4-222ENST00000568444 LDHAL6AQ6ZMR3 332 aa17.72■□□□□ 0.43
KLHDC4-222ENST00000568444 CNNM1Q9NRU3 951 aa17.72■□□□□ 0.43
KLHDC4-222ENST00000568444 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 KCNA3P22001 575 aa17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 OS9Q13438 667 aaPredicted RBP17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 PRPF40BQ6NWY9 871 aaKnown RBP17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 SYT17Q9BSW7 474 aa17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 RWDD1Q9H446 243 aaPredicted RBP17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 COPRSQ9NQ92 184 aa17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 PIM2Q9P1W9 311 aa17.71■□□□□ 0.43
KLHDC4-222ENST00000568444 BBOX1O75936 387 aa17.7■□□□□ 0.42
KLHDC4-222ENST00000568444 G3BP1Q13283 466 aaKnown RBP eCLIP17.7■□□□□ 0.42
KLHDC4-222ENST00000568444 ZNF219Q9P2Y4 722 aaPredicted RBP17.7■□□□□ 0.42
KLHDC4-222ENST00000568444 EXOC6BQ9Y2D4 811 aa17.7■□□□□ 0.42
KLHDC4-222ENST00000568444 BRCA1P38398 1863 aaKnown RBP17.69■□□□□ 0.42
KLHDC4-222ENST00000568444 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
KLHDC4-222ENST00000568444 LRRC24Q50LG9 513 aa17.69■□□□□ 0.42
KLHDC4-222ENST00000568444 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
KLHDC4-222ENST00000568444 PUS3Q9BZE2 481 aaKnown RBP17.69■□□□□ 0.42
KLHDC4-222ENST00000568444 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
KLHDC4-222ENST00000568444 BSDC1Q9NW68 430 aaPredicted RBP17.69■□□□□ 0.42
KLHDC4-222ENST00000568444 SLX4Q8IY92 1834 aa17.68■□□□□ 0.42
KLHDC4-222ENST00000568444 EYA2O00167 538 aa17.68■□□□□ 0.42
KLHDC4-222ENST00000568444 APBB1O00213 710 aa17.68■□□□□ 0.42
KLHDC4-222ENST00000568444 DALRD3Q5D0E6 543 aaKnown RBP17.68■□□□□ 0.42
KLHDC4-222ENST00000568444 TMC4Q7Z404 712 aa17.68■□□□□ 0.42
KLHDC4-222ENST00000568444 CIAO1O76071 339 aa17.67■□□□□ 0.42
KLHDC4-222ENST00000568444 IGHDP01880 384 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms