RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 GOLGA6L19H0YKK7 550 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 TIMM10P62072 90 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 AKAP4Q5JQC9 854 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 TTC5Q8N0Z6 440 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 ZNF594Q96JF6 807 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 SSH2Q76I76 1423 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 NRKQ7Z2Y5 1582 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 NRXN3Q9Y4C0 1643 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 A0A087WZG4 1122 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 BECN2A8MW95 431 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 GOLGA6L6A8MZA4 724 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 U2AF2P26368 475 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 ZNF165P49910 485 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 FKBP4Q02790 459 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 NECTIN1Q15223 517 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 TPD52L1Q16890 204 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 SIRT1Q96EB6 747 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 KAZALD1Q96I82 304 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 ZSCAN31Q96LW9 406 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 SH2B1Q9NRF2 756 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 MRVI1Q9Y6F6 885 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 TTC41PQ6P2S7 1318 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 IGKV5-2P06315 115 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 MCM5P33992 734 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 ZBTB3Q9H5J0 574 aa10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 GPHNQ9NQX3 736 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-206ENST00000568294 RPS6KB1P23443 525 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 ME1P48163 572 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 DBNLQ9UJU6 430 aaKnown RBP10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 C3P01024 1663 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 AOX1Q06278 1338 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 POLR3DP05423 398 aaPredicted RBP10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 MYRIPQ8NFW9 859 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 FAM200AQ8TCP9 573 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 LEO1Q8WVC0 666 aaPredicted RBP10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 ZNF496Q96IT1 587 aaPredicted RBP10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 NEK1Q96PY6 1258 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 GJB4Q9NTQ9 266 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 CLIP2Q9UDT6 1046 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 SPATA31D1Q6ZQQ2 1576 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 TOB2Q14106 344 aaPredicted RBP10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 WASHC4Q2M389 1173 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 HSP90AA4PQ58FG1 418 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 GORABQ5T7V8 394 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 TTLL5Q6EMB2 1281 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 LINS1Q8NG48 757 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 TBX22Q9Y458 520 aa10.59□□□□□ -0.71
HDGFL3-206ENST00000568294 PLEKHG1Q9ULL1 1385 aa10.58□□□□□ -0.72
HDGFL3-206ENST00000568294 LMBR1LQ6UX01 489 aa10.58□□□□□ -0.72
HDGFL3-206ENST00000568294 REREQ9P2R6 1566 aa10.58□□□□□ -0.72
HDGFL3-206ENST00000568294 ZBTB22O15209 634 aa10.58□□□□□ -0.72
HDGFL3-206ENST00000568294 SF3A1Q15459 793 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-206ENST00000568294 RXRAP19793 462 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 ZRSR1Q15695 479 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 UVSSAQ2YD98 709 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 PDCL2Q8N4E4 241 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 TNNT1P13805 278 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 PDCP20941 246 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 CCDC144CPQ8IYA2 1237 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 PGBD1Q96JS3 809 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 ADRA2BP18089 450 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 ATP2B3Q16720 1220 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 C11orf57Q6ZUT1 292 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 TMX1Q9H3N1 280 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 TECPR2O15040 1411 aa10.57□□□□□ -0.72
HDGFL3-206ENST00000568294 MON2Q7Z3U7 1717 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 NEURL1BA8MQ27 555 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 CYP21A2P08686 494 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 SDF4Q9BRK5 362 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 PXDNQ92626 1479 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 TAF5LO75529 589 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 SCRN1Q12765 414 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 CCDC144BQ3MJ40 725 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 ALDH1L1O75891 902 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 SMC2O95347 1197 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 GCKRQ14397 625 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 TNNI3KQ59H18 835 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 CCDC73Q6ZRK6 1079 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 TMEM87AQ8NBN3 555 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 FPGT-TNNI3KV9GXZ4 949 aa10.56□□□□□ -0.72
HDGFL3-206ENST00000568294 A0A1B0GVL5 298 aa10.55□□□□□ -0.72
HDGFL3-206ENST00000568294 PTPDC1A2A3K4 754 aa10.55□□□□□ -0.72
HDGFL3-206ENST00000568294 HMGN5P82970 282 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-206ENST00000568294 KIAA1524Q8TCG1 905 aa10.55□□□□□ -0.72
HDGFL3-206ENST00000568294 FUCA2Q9BTY2 467 aa10.55□□□□□ -0.72
HDGFL3-206ENST00000568294 DDX21Q9NR30 783 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDGFL3-206ENST00000568294 FAM177A1Q8N128 213 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-206ENST00000568294 FSIP1Q8NA03 581 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms