RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 COL4A5P29400 1685 aa8.33□□□□□ -1.08
PTPN9-205ENST00000568108 IBTKQ9P2D0 1353 aaPredicted RBP8.33□□□□□ -1.08
PTPN9-205ENST00000568108 ERBB4Q15303 1308 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 NUP98P52948 1817 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 SPDYE2BA6NHP3 402 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 BBOX1O75936 387 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 SPDYE6P0CI01 402 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 CXCL9Q07325 125 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 PDIA6Q15084 440 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 SPDYE2Q495Y8 402 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 CYP4F22Q6NT55 531 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 SUPT20HQ8NEM7 779 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 ADARB2Q9NS39 739 aaKnown RBP8.32□□□□□ -1.08
PTPN9-205ENST00000568108 GPRC5DQ9NZD1 345 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
PTPN9-205ENST00000568108 TSPYL4Q9UJ04 414 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 ZNRF3Q9ULT6 936 aa8.32□□□□□ -1.08
PTPN9-205ENST00000568108 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
PTPN9-205ENST00000568108 RIC1Q4ADV7 1423 aa8.31□□□□□ -1.08
PTPN9-205ENST00000568108 ECM2O94769 699 aaPredicted RBP8.31□□□□□ -1.08
PTPN9-205ENST00000568108 ANXA1P04083 346 aa8.31□□□□□ -1.08
PTPN9-205ENST00000568108 DPP8Q6V1X1 898 aaPredicted RBP8.31□□□□□ -1.08
PTPN9-205ENST00000568108 SP8Q8IXZ3 490 aa8.31□□□□□ -1.08
PTPN9-205ENST00000568108 MPNDQ8N594 471 aa8.31□□□□□ -1.08
PTPN9-205ENST00000568108 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
PTPN9-205ENST00000568108 RTFDC1Q9BY42 306 aaPredicted RBP8.31□□□□□ -1.08
PTPN9-205ENST00000568108 SSUH2Q9Y2M2 353 aa8.31□□□□□ -1.08
PTPN9-205ENST00000568108 TLL2Q9Y6L7 1015 aa8.31□□□□□ -1.08
PTPN9-205ENST00000568108 LTBP1Q14766 1721 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 CCDC85CA6NKD9 419 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 CELF2O95319 508 aaKnown RBP8.3□□□□□ -1.08
PTPN9-205ENST00000568108 NEFLP07196 543 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
PTPN9-205ENST00000568108 MAP2K2P36507 400 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 GMPSP49915 693 aaPredicted RBP8.3□□□□□ -1.08
PTPN9-205ENST00000568108 RIPK4P57078 832 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 AIMP1Q12904 312 aaKnown RBP8.3□□□□□ -1.08
PTPN9-205ENST00000568108 TNIP1Q15025 636 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 PROSER3Q2NL68 480 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 HSP90AB3PQ58FF7 597 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 CIAPIN1Q6FI81 312 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 DDX46Q7L014 1031 aaKnown RBP8.3□□□□□ -1.08
PTPN9-205ENST00000568108 COPS6Q7L5N1 327 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 LRP10Q7Z4F1 713 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 LAMB4A4D0S4 1761 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 KDM3BQ7LBC6 1761 aa8.3□□□□□ -1.08
PTPN9-205ENST00000568108 ABCC4O15439 1325 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 DLG5Q8TDM6 1919 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 AOC2O75106 756 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 RAD17O75943 681 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 KIAA2012Q0VF49 1180 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 SAPCD2Q86UD0 394 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 NLRP10Q86W26 655 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 ZC3H15Q8WU90 426 aaKnown RBP8.29□□□□□ -1.08
PTPN9-205ENST00000568108 NECTIN2Q92692 538 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 GLIS2Q9BZE0 524 aaPredicted RBP8.29□□□□□ -1.08
PTPN9-205ENST00000568108 BABAM1Q9NWV8 329 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 PGAP2Q9UHJ9 254 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 TRMT112Q9UI30 125 aaKnown RBP8.29□□□□□ -1.08
PTPN9-205ENST00000568108 CNOT7Q9UIV1 285 aaKnown RBP8.29□□□□□ -1.08
PTPN9-205ENST00000568108 TSKSQ9UJT2 592 aa8.29□□□□□ -1.08
PTPN9-205ENST00000568108 H7C1D1 291 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 HIRAP54198 1017 aaPredicted RBP8.28□□□□□ -1.08
PTPN9-205ENST00000568108 TCIRG1Q13488 830 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 GRAPQ13588 217 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 FAM161AQ3B820 660 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 GRAPLQ8TC17 118 aaPredicted RBP8.28□□□□□ -1.08
PTPN9-205ENST00000568108 XAGE3Q8WTP9 111 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 ZNF408Q9H9D4 720 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 SH3TC1Q8TE82 1336 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 CDHR2Q9BYE9 1310 aa8.28□□□□□ -1.08
PTPN9-205ENST00000568108 CA12O43570 354 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 DSG3P32926 999 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 TMPOP42166 694 aaKnown RBP8.27□□□□□ -1.09
PTPN9-205ENST00000568108 TMC4Q7Z404 712 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 USP48Q86UV5 1035 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 PLCD3Q8N3E9 789 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 TRPM4Q8TD43 1214 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 ZNF428Q96B54 188 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 PRKRIP1Q9H875 184 aaPredicted RBP8.27□□□□□ -1.09
PTPN9-205ENST00000568108 TRPM7Q96QT4 1865 aa8.27□□□□□ -1.09
PTPN9-205ENST00000568108 SHTN1A0MZ66 631 aa8.26□□□□□ -1.09
PTPN9-205ENST00000568108 YDJCA8MPS7 323 aa8.26□□□□□ -1.09
PTPN9-205ENST00000568108 BRPF1P55201 1214 aaPredicted RBP8.26□□□□□ -1.09
PTPN9-205ENST00000568108 MLLT1Q03111 559 aaPredicted RBP8.26□□□□□ -1.09
PTPN9-205ENST00000568108 LMOD3Q0VAK6 560 aa8.26□□□□□ -1.09
PTPN9-205ENST00000568108 NEUROD2Q15784 382 aa8.26□□□□□ -1.09
PTPN9-205ENST00000568108 WASHC4Q2M389 1173 aa8.26□□□□□ -1.09
PTPN9-205ENST00000568108 MICALL2Q8IY33 904 aa8.26□□□□□ -1.09
PTPN9-205ENST00000568108 DPF2Q92785 391 aa8.26□□□□□ -1.09
PTPN9-205ENST00000568108 NSFL1CQ9UNZ2 370 aaKnown RBP8.26□□□□□ -1.09
PTPN9-205ENST00000568108 LAS1LQ9Y4W2 734 aaKnown RBP8.26□□□□□ -1.09
PTPN9-205ENST00000568108 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 CHL1O00533 1208 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 RIMBP2O15034 1052 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 RGS19P49795 217 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 HUNKP57058 714 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 NOGQ13253 232 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms