RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 KIAA0556O60303 1618 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 TTBK1Q5TCY1 1321 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-217ENST00000567817 PRMT3O60678 531 aa8.01□□□□□ -1.13
CAPN3-217ENST00000567817 ARAFP10398 606 aa8.01□□□□□ -1.13
CAPN3-217ENST00000567817 TYRO3Q06418 890 aa8.01□□□□□ -1.13
CAPN3-217ENST00000567817 FKBP5Q13451 457 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-217ENST00000567817 MYO19Q96H55 970 aa8.01□□□□□ -1.13
CAPN3-217ENST00000567817 QTRT2Q9H974 415 aaKnown RBP8.01□□□□□ -1.13
CAPN3-217ENST00000567817 TGFBR3LH3BV60 316 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 OIP5O43482 229 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 SLCO4C1Q6ZQN7 724 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 ZNF280CQ8ND82 737 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 PRIMPOLQ96LW4 560 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 CEP63Q96MT8 703 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 BRD7Q9NPI1 651 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 STRN4Q9NRL3 753 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 CXXC1Q9P0U4 656 aaPredicted RBP8□□□□□ -1.13
CAPN3-217ENST00000567817 ADAMTS8Q9UP79 889 aa8□□□□□ -1.13
CAPN3-217ENST00000567817 ARHGEF40Q8TER5 1519 aa7.99□□□□□ -1.13
CAPN3-217ENST00000567817 KCNQ4P56696 695 aa7.99□□□□□ -1.13
CAPN3-217ENST00000567817 BTLAQ7Z6A9 289 aa7.99□□□□□ -1.13
CAPN3-217ENST00000567817 COL26A1Q96A83 441 aa7.99□□□□□ -1.13
CAPN3-217ENST00000567817 FANCAO15360 1455 aa7.99□□□□□ -1.13
CAPN3-217ENST00000567817 GOLGA3Q08378 1498 aa7.99□□□□□ -1.13
CAPN3-217ENST00000567817 ARID4BQ4LE39 1312 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-217ENST00000567817 YEATS2Q9ULM3 1422 aa7.98□□□□□ -1.13
CAPN3-217ENST00000567817 ADH6P28332 368 aa7.98□□□□□ -1.13
CAPN3-217ENST00000567817 ZNF468Q5VIY5 522 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-217ENST00000567817 RIMS1Q86UR5 1692 aaKnown RBP7.98□□□□□ -1.13
CAPN3-217ENST00000567817 ABCA9Q8IUA7 1624 aa7.97□□□□□ -1.13
CAPN3-217ENST00000567817 RNF225M0QZC1 329 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-217ENST00000567817 SFSWAPQ12872 951 aaKnown RBP7.97□□□□□ -1.13
CAPN3-217ENST00000567817 DGKZQ13574 1117 aa7.97□□□□□ -1.13
CAPN3-217ENST00000567817 GGA1Q9UJY5 639 aa7.97□□□□□ -1.13
CAPN3-217ENST00000567817 PRR12Q9ULL5 1215 aa7.97□□□□□ -1.13
CAPN3-217ENST00000567817 BCS1LQ9Y276 419 aa7.97□□□□□ -1.13
CAPN3-217ENST00000567817 ABCA8O94911 1581 aa7.97□□□□□ -1.13
CAPN3-217ENST00000567817 PTCD1O75127 700 aaKnown RBP7.96□□□□□ -1.14
CAPN3-217ENST00000567817 HSPA2P54652 639 aa7.96□□□□□ -1.14
CAPN3-217ENST00000567817 C11orf91Q3C1V1 193 aa7.96□□□□□ -1.14
CAPN3-217ENST00000567817 NEDD1Q8NHV4 660 aa7.96□□□□□ -1.14
CAPN3-217ENST00000567817 KLK14Q9P0G3 267 aa7.96□□□□□ -1.14
CAPN3-217ENST00000567817 KCNH4Q9UQ05 1017 aa7.96□□□□□ -1.14
CAPN3-217ENST00000567817 TTC37Q6PGP7 1564 aa7.96□□□□□ -1.14
CAPN3-217ENST00000567817 NEURL1BA8MQ27 555 aa7.95□□□□□ -1.14
CAPN3-217ENST00000567817 ATP2B4P23634 1241 aa7.95□□□□□ -1.14
CAPN3-217ENST00000567817 MARSP56192 900 aaKnown RBP7.95□□□□□ -1.14
CAPN3-217ENST00000567817 C1orf229Q6ZS94 237 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-217ENST00000567817 GALNT6Q8NCL4 622 aa7.95□□□□□ -1.14
CAPN3-217ENST00000567817 EDARADDQ8WWZ3 215 aa7.95□□□□□ -1.14
CAPN3-217ENST00000567817 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
CAPN3-217ENST00000567817 DMGDHQ9UI17 866 aaKnown RBP7.95□□□□□ -1.14
CAPN3-217ENST00000567817 DNMT3AQ9Y6K1 912 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-217ENST00000567817 PREX1Q8TCU6 1659 aa7.95□□□□□ -1.14
CAPN3-217ENST00000567817 PTPRTO14522 1441 aa7.95□□□□□ -1.14
CAPN3-217ENST00000567817 AKNAQ7Z591 1439 aa7.95□□□□□ -1.14
CAPN3-217ENST00000567817 MAGI2Q86UL8 1455 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 FRMPD1Q5SYB0 1578 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 TMEM88BA6NKF7 163 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 EPXP11678 715 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 EPB42P16452 691 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 SPEM2Q0P670 501 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 NEUROD1Q13562 356 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 C16orf46Q6P387 395 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 SCARF2Q96GP6 870 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-217ENST00000567817 KLF15Q9UIH9 416 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 LRFN2Q9ULH4 789 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 CEP162Q5TB80 1403 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 RAPGEF2Q9Y4G8 1499 aa7.94□□□□□ -1.14
CAPN3-217ENST00000567817 EFCAB5A4FU69 1503 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 SHISA8B8ZZ34 492 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 SIN3BO75182 1162 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 IDH3AP50213 366 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 COX20Q5RI15 118 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 SYT9Q86SS6 491 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 FCHSD1Q86WN1 690 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 SLC30A3Q99726 388 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 MKNK1Q9BUB5 465 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 EFCC1Q9HA90 598 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 FHOD3Q2V2M9 1422 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 ZMYM4Q5VZL5 1548 aa7.93□□□□□ -1.14
CAPN3-217ENST00000567817 RAPGEF3O95398 923 aa7.92□□□□□ -1.14
CAPN3-217ENST00000567817 ARSDP51689 593 aa7.92□□□□□ -1.14
CAPN3-217ENST00000567817 PCBP4P57723 403 aaKnown RBP7.92□□□□□ -1.14
CAPN3-217ENST00000567817 GRIN2CQ14957 1233 aa7.92□□□□□ -1.14
CAPN3-217ENST00000567817 DENND4BO75064 1496 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-217ENST00000567817 CFAP74Q9C0B2 1584 aa7.92□□□□□ -1.14
CAPN3-217ENST00000567817 MICAL2O94851 1124 aa7.91□□□□□ -1.14
CAPN3-217ENST00000567817 INPP5BP32019 993 aa7.91□□□□□ -1.14
CAPN3-217ENST00000567817 KCNMA1Q12791 1236 aa7.91□□□□□ -1.14
CAPN3-217ENST00000567817 PODNQ7Z5L7 613 aa7.91□□□□□ -1.14
CAPN3-217ENST00000567817 IFT43Q96FT9 208 aa7.91□□□□□ -1.14
CAPN3-217ENST00000567817 ARID3AQ99856 593 aa7.91□□□□□ -1.14
CAPN3-217ENST00000567817 C11orf16Q9NQ32 467 aa7.91□□□□□ -1.14
CAPN3-217ENST00000567817 USTQ9Y2C2 406 aa7.91□□□□□ -1.14
CAPN3-217ENST00000567817 FER1L4A9Z1Z3 1794 aa7.9□□□□□ -1.14
CAPN3-217ENST00000567817 UHRF1BP1Q6BDS2 1440 aa7.9□□□□□ -1.14
CAPN3-217ENST00000567817 BRD2P25440 801 aaKnown RBP7.9□□□□□ -1.14
CAPN3-217ENST00000567817 TNFRSF25Q93038 417 aa7.9□□□□□ -1.14
CAPN3-217ENST00000567817 MDFIQ99750 246 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms