RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 NLRP3Q96P20 1036 aa22.4■■□□□ 1.18
CDH3-205ENST00000566808 ZBTB3Q9H5J0 574 aa22.4■■□□□ 1.18
CDH3-205ENST00000566808 H7C1D1 291 aa22.39■■□□□ 1.17
CDH3-205ENST00000566808 DCTN1Q14203 1278 aa22.39■■□□□ 1.17
CDH3-205ENST00000566808 TAF7Q15545 349 aaPredicted RBP22.39■■□□□ 1.17
CDH3-205ENST00000566808 PPP1R42Q7Z4L9 355 aa22.39■■□□□ 1.17
CDH3-205ENST00000566808 USP48Q86UV5 1035 aa22.39■■□□□ 1.17
CDH3-205ENST00000566808 CCDC102AQ96A19 550 aa22.39■■□□□ 1.17
CDH3-205ENST00000566808 CNOT7Q9UIV1 285 aaKnown RBP22.39■■□□□ 1.17
CDH3-205ENST00000566808 PARP10Q53GL7 1025 aa22.38■■□□□ 1.17
CDH3-205ENST00000566808 MICALL2Q8IY33 904 aa22.38■■□□□ 1.17
CDH3-205ENST00000566808 GBA2Q9HCG7 927 aaPredicted RBP22.38■■□□□ 1.17
CDH3-205ENST00000566808 GIGYF2Q6Y7W6 1299 aaKnown RBP22.37■■□□□ 1.17
CDH3-205ENST00000566808 CTU1Q7Z7A3 348 aaKnown RBP22.37■■□□□ 1.17
CDH3-205ENST00000566808 NUDCQ9Y266 331 aa22.37■■□□□ 1.17
CDH3-205ENST00000566808 RRP7AQ9Y3A4 280 aaKnown RBP22.37■■□□□ 1.17
CDH3-205ENST00000566808 KIF23Q02241 960 aaPredicted RBP22.36■■□□□ 1.17
CDH3-205ENST00000566808 TRIM26Q12899 539 aaPredicted RBP22.36■■□□□ 1.17
CDH3-205ENST00000566808 KRT26Q7Z3Y9 468 aa22.36■■□□□ 1.17
CDH3-205ENST00000566808 MPNDQ8N594 471 aa22.36■■□□□ 1.17
CDH3-205ENST00000566808 RNF186Q9NXI6 227 aa22.36■■□□□ 1.17
CDH3-205ENST00000566808 SHTN1A0MZ66 631 aa22.35■■□□□ 1.17
CDH3-205ENST00000566808 TRPA1O75762 1119 aa22.35■■□□□ 1.17
CDH3-205ENST00000566808 BBOX1O75936 387 aa22.35■■□□□ 1.17
CDH3-205ENST00000566808 MYL6BP14649 208 aa22.35■■□□□ 1.17
CDH3-205ENST00000566808 SP8Q8IXZ3 490 aa22.35■■□□□ 1.17
CDH3-205ENST00000566808 C2orf69Q8N8R5 385 aa22.35■■□□□ 1.17
CDH3-205ENST00000566808 TAF1P21675 1872 aa22.34■■□□□ 1.17
CDH3-205ENST00000566808 ERBB4Q15303 1308 aa22.34■■□□□ 1.17
CDH3-205ENST00000566808 YDJCA8MPS7 323 aa22.34■■□□□ 1.17
CDH3-205ENST00000566808 U2AF1L5P0DN76 240 aaPredicted RBP22.34■■□□□ 1.17
CDH3-205ENST00000566808 ZNF157P51786 506 aaPredicted RBP22.34■■□□□ 1.17
CDH3-205ENST00000566808 U2AF1Q01081 240 aaKnown RBP eCLIP22.34■■□□□ 1.17
CDH3-205ENST00000566808 SLC10A5Q5PT55 438 aa22.34■■□□□ 1.17
CDH3-205ENST00000566808 PNISRQ8TF01 805 aaKnown RBP22.34■■□□□ 1.17
CDH3-205ENST00000566808 DPF2Q92785 391 aa22.34■■□□□ 1.17
CDH3-205ENST00000566808 SLC10A3P09131 477 aa22.33■■□□□ 1.17
CDH3-205ENST00000566808 UTP14AQ9BVJ6 771 aaKnown RBP22.33■■□□□ 1.17
CDH3-205ENST00000566808 MIS18AQ9NYP9 233 aa22.33■■□□□ 1.17
CDH3-205ENST00000566808 CNGB1Q14028 1251 aaPredicted RBP22.32■■□□□ 1.16
CDH3-205ENST00000566808 DLK2Q6UY11 383 aa22.32■■□□□ 1.16
CDH3-205ENST00000566808 SAMD7Q7Z3H4 446 aa22.31■■□□□ 1.16
CDH3-205ENST00000566808 ADM5C9JUS6 153 aa22.3■■□□□ 1.16
CDH3-205ENST00000566808 EIF4A1P60842 406 aaKnown RBP22.3■■□□□ 1.16
CDH3-205ENST00000566808 TBC1D10BQ4KMP7 808 aaPredicted RBP22.3■■□□□ 1.16
CDH3-205ENST00000566808 TMC4Q7Z404 712 aa22.3■■□□□ 1.16
CDH3-205ENST00000566808 REM2Q8IYK8 340 aaPredicted RBP22.3■■□□□ 1.16
CDH3-205ENST00000566808 DCPSQ96C86 337 aaKnown RBP22.3■■□□□ 1.16
CDH3-205ENST00000566808 HPS5Q9UPZ3 1129 aa22.3■■□□□ 1.16
CDH3-205ENST00000566808 ZBTB12Q9Y330 459 aaPredicted RBP22.3■■□□□ 1.16
CDH3-205ENST00000566808 PAPPA2Q9BXP8 1791 aa22.3■■□□□ 1.16
CDH3-205ENST00000566808 RPS12P25398 132 aaKnown RBP22.29■■□□□ 1.16
CDH3-205ENST00000566808 GRAPQ13588 217 aa22.29■■□□□ 1.16
CDH3-205ENST00000566808 PKN2Q16513 984 aaKnown RBP22.29■■□□□ 1.16
CDH3-205ENST00000566808 GRAPLQ8TC17 118 aaPredicted RBP22.29■■□□□ 1.16
CDH3-205ENST00000566808 PSMD14O00487 310 aa22.28■■□□□ 1.16
CDH3-205ENST00000566808 EGFRP00533 1210 aa22.28■■□□□ 1.16
CDH3-205ENST00000566808 DDX46Q7L014 1031 aaKnown RBP22.28■■□□□ 1.16
CDH3-205ENST00000566808 GCC1Q96CN9 775 aa22.28■■□□□ 1.16
CDH3-205ENST00000566808 CSRNP1Q96S65 589 aa22.28■■□□□ 1.16
CDH3-205ENST00000566808 SCN9AQ15858 1988 aa22.25■■□□□ 1.15
CDH3-205ENST00000566808 RASAL3Q86YV0 1011 aa22.25■■□□□ 1.15
CDH3-205ENST00000566808 SULF1Q8IWU6 871 aa22.25■■□□□ 1.15
CDH3-205ENST00000566808 HCLS1P14317 486 aaPredicted RBP22.24■■□□□ 1.15
CDH3-205ENST00000566808 WASHC4Q2M389 1173 aa22.24■■□□□ 1.15
CDH3-205ENST00000566808 KIF4BQ2VIQ3 1234 aa22.24■■□□□ 1.15
CDH3-205ENST00000566808 LRP10Q7Z4F1 713 aa22.24■■□□□ 1.15
CDH3-205ENST00000566808 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
CDH3-205ENST00000566808 GGA3Q9NZ52 723 aa22.24■■□□□ 1.15
CDH3-205ENST00000566808 PSME4Q14997 1843 aa22.24■■□□□ 1.15
CDH3-205ENST00000566808 HTTP42858 3142 aa22.24■■□□□ 1.15
CDH3-205ENST00000566808 HSP90AB3PQ58FF7 597 aa22.23■■□□□ 1.15
CDH3-205ENST00000566808 DBNDD1Q9H9R9 158 aa22.23■■□□□ 1.15
CDH3-205ENST00000566808 MKI67P46013 3256 aaKnown RBP22.23■■□□□ 1.15
CDH3-205ENST00000566808 CDCA5Q96FF9 252 aa22.22■■□□□ 1.15
CDH3-205ENST00000566808 HDAC9Q9UKV0 1011 aa22.22■■□□□ 1.15
CDH3-205ENST00000566808 SH3TC1Q8TE82 1336 aa22.22■■□□□ 1.15
CDH3-205ENST00000566808 RTL9Q8NET4 1388 aa22.22■■□□□ 1.15
CDH3-205ENST00000566808 NEFMP07197 916 aa22.21■■□□□ 1.15
CDH3-205ENST00000566808 NLRP10Q86W26 655 aa22.21■■□□□ 1.15
CDH3-205ENST00000566808 ZNF609O15014 1411 aa22.21■■□□□ 1.15
CDH3-205ENST00000566808 ECE2O60344 883 aa22.2■■□□□ 1.14
CDH3-205ENST00000566808 FKBP1BP68106 108 aa22.2■■□□□ 1.14
CDH3-205ENST00000566808 RBM26Q5T8P6 1007 aaKnown RBP22.2■■□□□ 1.14
CDH3-205ENST00000566808 ZNF296Q8WUU4 475 aaPredicted RBP22.19■■□□□ 1.14
CDH3-205ENST00000566808 THUMPD2Q9BTF0 503 aaKnown RBP22.19■■□□□ 1.14
CDH3-205ENST00000566808 TRMT112Q9UI30 125 aaKnown RBP22.19■■□□□ 1.14
CDH3-205ENST00000566808 PPP2R1AP30153 589 aa22.18■■□□□ 1.14
CDH3-205ENST00000566808 PDIA6Q15084 440 aa22.18■■□□□ 1.14
CDH3-205ENST00000566808 EYA3Q99504 573 aa22.18■■□□□ 1.14
CDH3-205ENST00000566808 NSFL1CQ9UNZ2 370 aaKnown RBP22.18■■□□□ 1.14
CDH3-205ENST00000566808 NOM1Q5C9Z4 860 aaKnown RBP22.17■■□□□ 1.14
CDH3-205ENST00000566808 FBXO46Q6PJ61 603 aaPredicted RBP22.17■■□□□ 1.14
CDH3-205ENST00000566808 RBBP6Q7Z6E9 1792 aaKnown RBP22.17■■□□□ 1.14
CDH3-205ENST00000566808 ASTN2O75129 1339 aaPredicted RBP22.16■■□□□ 1.14
CDH3-205ENST00000566808 C6orf229H3BNL8 230 aa22.16■■□□□ 1.14
CDH3-205ENST00000566808 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
CDH3-205ENST00000566808 PROSER3Q2NL68 480 aa22.16■■□□□ 1.14
CDH3-205ENST00000566808 COL4A1P02462 1669 aa22.16■■□□□ 1.14
CDH3-205ENST00000566808 POLLQ9UGP5 575 aa22.15■■□□□ 1.14
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