RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SPATA32Q96LK8 384 aa25.54■■□□□ 1.68
SPSB3-208ENST00000566339 KIF1AQ12756 1690 aa25.54■■□□□ 1.68
SPSB3-208ENST00000566339 ZNF530Q6P9A1 599 aaPredicted RBP25.54■■□□□ 1.68
SPSB3-208ENST00000566339 CDC37L1Q7L3B6 337 aa25.54■■□□□ 1.68
SPSB3-208ENST00000566339 PLA2G4DQ86XP0 818 aa25.54■■□□□ 1.68
SPSB3-208ENST00000566339 LARP6Q9BRS8 491 aaKnown RBP25.54■■□□□ 1.68
SPSB3-208ENST00000566339 BCL2L12Q9HB09 334 aa25.54■■□□□ 1.68
SPSB3-208ENST00000566339 PYCARDQ9ULZ3 195 aa25.54■■□□□ 1.68
SPSB3-208ENST00000566339 CTAGE5O15320 804 aa25.53■■□□□ 1.68
SPSB3-208ENST00000566339 SASH1O94885 1247 aa25.53■■□□□ 1.68
SPSB3-208ENST00000566339 LEO1Q8WVC0 666 aaPredicted RBP25.53■■□□□ 1.68
SPSB3-208ENST00000566339 COL15A1P39059 1388 aa25.52■■□□□ 1.68
SPSB3-208ENST00000566339 NEMFO60524 1076 aa25.52■■□□□ 1.68
SPSB3-208ENST00000566339 ATL3Q6DD88 541 aa25.52■■□□□ 1.68
SPSB3-208ENST00000566339 NECAB1Q8N987 351 aa25.52■■□□□ 1.68
SPSB3-208ENST00000566339 CHMP4CQ96CF2 233 aa25.52■■□□□ 1.68
SPSB3-208ENST00000566339 GTPBP4Q9BZE4 634 aaKnown RBP25.52■■□□□ 1.68
SPSB3-208ENST00000566339 LIG1P18858 919 aa25.51■■□□□ 1.67
SPSB3-208ENST00000566339 PLCB2Q00722 1185 aa25.51■■□□□ 1.67
SPSB3-208ENST00000566339 EAF2Q96CJ1 260 aaPredicted RBP25.51■■□□□ 1.67
SPSB3-208ENST00000566339 LLPHQ9BRT6 129 aaKnown RBP25.51■■□□□ 1.67
SPSB3-208ENST00000566339 CBX8Q9HC52 389 aa25.51■■□□□ 1.67
SPSB3-208ENST00000566339 DDX21Q9NR30 783 aaKnown RBP eCLIP25.51■■□□□ 1.67
SPSB3-208ENST00000566339 CFAP45Q9UL16 551 aa25.51■■□□□ 1.67
SPSB3-208ENST00000566339 COL16A1Q07092 1604 aaPredicted RBP25.51■■□□□ 1.67
SPSB3-208ENST00000566339 ZNF75DP51815 510 aa25.51■■□□□ 1.67
SPSB3-208ENST00000566339 TOB2Q14106 344 aaPredicted RBP25.51■■□□□ 1.67
SPSB3-208ENST00000566339 C1orf141Q5JVX7 400 aa25.51■■□□□ 1.67
SPSB3-208ENST00000566339 SARM1Q6SZW1 724 aa25.51■■□□□ 1.67
SPSB3-208ENST00000566339 PAXBP1Q9Y5B6 917 aa25.51■■□□□ 1.67
SPSB3-208ENST00000566339 DDX17Q92841 729 aaKnown RBP25.5■■□□□ 1.67
SPSB3-208ENST00000566339 FAM227BQ96M60 508 aa25.5■■□□□ 1.67
SPSB3-208ENST00000566339 FSD1Q9BTV5 496 aa25.5■■□□□ 1.67
SPSB3-208ENST00000566339 DACT1Q9NYF0 836 aa25.5■■□□□ 1.67
SPSB3-208ENST00000566339 SMTNL1A8MU46 457 aa25.49■■□□□ 1.67
SPSB3-208ENST00000566339 DMTNQ08495 405 aa25.49■■□□□ 1.67
SPSB3-208ENST00000566339 SUCLG2Q96I99 432 aa25.49■■□□□ 1.67
SPSB3-208ENST00000566339 FEZ1Q99689 392 aa25.49■■□□□ 1.67
SPSB3-208ENST00000566339 AHDC1Q5TGY3 1603 aaPredicted RBP25.49■■□□□ 1.67
SPSB3-208ENST00000566339 C1orf167Q5SNV9 1468 aa25.49■■□□□ 1.67
SPSB3-208ENST00000566339 RIOK3O14730 519 aaKnown RBP25.49■■□□□ 1.67
SPSB3-208ENST00000566339 KCNQ3O43525 872 aa25.49■■□□□ 1.67
SPSB3-208ENST00000566339 ARHGEF25Q86VW2 580 aa25.49■■□□□ 1.67
SPSB3-208ENST00000566339 GTF3C6Q969F1 213 aa25.49■■□□□ 1.67
SPSB3-208ENST00000566339 U3KPZ7 1027 aaPredicted RBP25.49■■□□□ 1.67
SPSB3-208ENST00000566339 ANO6Q4KMQ2 910 aa25.48■■□□□ 1.67
SPSB3-208ENST00000566339 LARP1Q6PKG0 1096 aaKnown RBP25.48■■□□□ 1.67
SPSB3-208ENST00000566339 PDCL2Q8N4E4 241 aa25.48■■□□□ 1.67
SPSB3-208ENST00000566339 ORAI2Q96SN7 254 aa25.48■■□□□ 1.67
SPSB3-208ENST00000566339 PA2G4Q9UQ80 394 aaKnown RBP25.48■■□□□ 1.67
SPSB3-208ENST00000566339 ATP5JP18859 108 aa25.47■■□□□ 1.67
SPSB3-208ENST00000566339 C17orf53Q8N3J3 647 aaPredicted RBP25.47■■□□□ 1.67
SPSB3-208ENST00000566339 ABCC6O95255 1503 aa25.47■■□□□ 1.67
SPSB3-208ENST00000566339 ALS2Q96Q42 1657 aa25.47■■□□□ 1.67
SPSB3-208ENST00000566339 A0A0D9SFI3 127 aa25.46■■□□□ 1.67
SPSB3-208ENST00000566339 TAF5LO75529 589 aa25.46■■□□□ 1.67
SPSB3-208ENST00000566339 HMGB1P09429 215 aaKnown RBP25.46■■□□□ 1.67
SPSB3-208ENST00000566339 RESTQ13127 1097 aa25.46■■□□□ 1.67
SPSB3-208ENST00000566339 KAZALD1Q96I82 304 aa25.46■■□□□ 1.67
SPSB3-208ENST00000566339 PLEKHG2Q9H7P9 1386 aa25.46■■□□□ 1.67
SPSB3-208ENST00000566339 PTGS1P23219 599 aa25.46■■□□□ 1.67
SPSB3-208ENST00000566339 PSME1Q06323 249 aa25.46■■□□□ 1.67
SPSB3-208ENST00000566339 SPC24Q8NBT2 197 aa25.46■■□□□ 1.67
SPSB3-208ENST00000566339 BICC1Q9H694 974 aaKnown RBP25.46■■□□□ 1.67
SPSB3-208ENST00000566339 NAA16Q6N069 864 aaPredicted RBP25.45■■□□□ 1.66
SPSB3-208ENST00000566339 MPNDQ8N594 471 aa25.45■■□□□ 1.66
SPSB3-208ENST00000566339 COPRSQ9NQ92 184 aa25.45■■□□□ 1.66
SPSB3-208ENST00000566339 LUZP1Q86V48 1076 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 MRFAP1L1Q96HT8 127 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 NEK1Q96PY6 1258 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 RGPD5Q99666 1765 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 SCN11AQ9UI33 1791 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 ZNF165P49910 485 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 NEXNQ0ZGT2 675 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 ESCO1Q5FWF5 840 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 CCDC186Q7Z3E2 898 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 SMARCC2Q8TAQ2 1214 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 LRRC59Q96AG4 307 aaKnown RBP25.44■■□□□ 1.66
SPSB3-208ENST00000566339 TRIM5Q9C035 493 aa25.44■■□□□ 1.66
SPSB3-208ENST00000566339 PPP4R3BQ5MIZ7 849 aa25.43■■□□□ 1.66
SPSB3-208ENST00000566339 ZSCAN25Q6NSZ9 544 aa25.43■■□□□ 1.66
SPSB3-208ENST00000566339 NHSL1Q5SYE7 1610 aa25.42■■□□□ 1.66
SPSB3-208ENST00000566339 ANXA1P04083 346 aa25.42■■□□□ 1.66
SPSB3-208ENST00000566339 DHX8Q14562 1220 aaKnown RBP25.42■■□□□ 1.66
SPSB3-208ENST00000566339 CWF19L2Q2TBE0 894 aaKnown RBP25.42■■□□□ 1.66
SPSB3-208ENST00000566339 FERMT3Q86UX7 667 aa25.42■■□□□ 1.66
SPSB3-208ENST00000566339 CCDC8Q9H0W5 538 aaPredicted RBP25.42■■□□□ 1.66
SPSB3-208ENST00000566339 KCND1Q9NSA2 647 aa25.42■■□□□ 1.66
SPSB3-208ENST00000566339 GCP02774 474 aa25.41■■□□□ 1.66
SPSB3-208ENST00000566339 ZSCAN20P17040 1043 aaPredicted RBP25.41■■□□□ 1.66
SPSB3-208ENST00000566339 BICD2Q8TD16 824 aa25.41■■□□□ 1.66
SPSB3-208ENST00000566339 BOLA2Q9H3K6 86 aa25.41■■□□□ 1.66
SPSB3-208ENST00000566339 MPRIPQ6WCQ1 1025 aa25.41■■□□□ 1.66
SPSB3-208ENST00000566339 DRC7Q8IY82 874 aa25.41■■□□□ 1.66
SPSB3-208ENST00000566339 PGBD1Q96JS3 809 aa25.41■■□□□ 1.66
SPSB3-208ENST00000566339 C5P01031 1676 aa25.4■■□□□ 1.66
SPSB3-208ENST00000566339 RBM6P78332 1123 aaKnown RBP25.4■■□□□ 1.66
SPSB3-208ENST00000566339 CAMK4Q16566 473 aa25.4■■□□□ 1.66
SPSB3-208ENST00000566339 PROSER3Q2NL68 480 aa25.4■■□□□ 1.66
SPSB3-208ENST00000566339 RCOR1Q9UKL0 485 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms