RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 CALM2P0DP24 149 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 CALM3P0DP25 149 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 RXRBP28702 533 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 SCAND2PQ9GZW5 306 aaPredicted RBP7.56□□□□□ -1.2
LINC01043-201ENST00000565936 VEZTQ9HBM0 779 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 TMEM94Q12767 1356 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 IARSP41252 1262 aaKnown RBP7.56□□□□□ -1.2
LINC01043-201ENST00000565936 ERMNQ8TAM6 284 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 ERCC4Q92889 916 aaPredicted RBP7.56□□□□□ -1.2
LINC01043-201ENST00000565936 LIMCH1Q9UPQ0 1083 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 ZNF397Q8NF99 534 aaPredicted RBP7.56□□□□□ -1.2
LINC01043-201ENST00000565936 SNRKQ9NRH2 765 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 PDE8AO60658 829 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 BMP15O95972 392 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 ANXA1P04083 346 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 MYCNP04198 464 aaPredicted RBP7.56□□□□□ -1.2
LINC01043-201ENST00000565936 NBPF7P0C2Y1 421 aaPredicted RBP7.56□□□□□ -1.2
LINC01043-201ENST00000565936 CHMP4BP1P59074 171 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 WTAPQ15007 396 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 MRPL50Q8N5N7 158 aaKnown RBP7.56□□□□□ -1.2
LINC01043-201ENST00000565936 GGA1Q9UJY5 639 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 PARD3Q8TEW0 1356 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 KDM6BO15054 1643 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 NEBLO76041 1014 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 CETN2P41208 172 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 TTC41PQ6P2S7 1318 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 FBLN1P23142 703 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 PRIM1P49642 420 aaKnown RBP7.56□□□□□ -1.2
LINC01043-201ENST00000565936 MRE11P49959 708 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 CETN1Q12798 172 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 DDX11Q96FC9 970 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 TESK2Q96S53 571 aa7.56□□□□□ -1.2
LINC01043-201ENST00000565936 METAP2P50579 478 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC01043-201ENST00000565936 FAM196AQ6ZSG2 479 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 NEK1Q96PY6 1258 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 QTRT2Q9H974 415 aaKnown RBP7.55□□□□□ -1.2
LINC01043-201ENST00000565936 F8W031 263 aaPredicted RBP7.55□□□□□ -1.2
LINC01043-201ENST00000565936 LTKP29376 864 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 IFIT1BQ5T764 474 aaKnown RBP7.55□□□□□ -1.2
LINC01043-201ENST00000565936 BEGAINQ9BUH8 593 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 SAMD9LQ8IVG5 1584 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 MCMDC2Q4G0Z9 681 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 NOM1Q5C9Z4 860 aaKnown RBP7.55□□□□□ -1.2
LINC01043-201ENST00000565936 CAVIN1Q6NZI2 390 aaKnown RBP7.55□□□□□ -1.2
LINC01043-201ENST00000565936 DNAJC5Q9H3Z4 198 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 SPDYE4A6NLX3 237 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 BMP2KLQ5H9B9 411 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 NUP62CLQ9H1M0 184 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 STX8Q9UNK0 236 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 HDAC1Q13547 482 aaPredicted RBP7.55□□□□□ -1.2
LINC01043-201ENST00000565936 ANKRD44Q8N8A2 993 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 RSPH6AQ9H0K4 717 aa7.55□□□□□ -1.2
LINC01043-201ENST00000565936 MAGI3Q5TCQ9 1506 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 TRAK2O60296 914 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 NASPP49321 788 aaPredicted RBP7.54□□□□□ -1.2
LINC01043-201ENST00000565936 RTL9Q8NET4 1388 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 CCDC83Q8IWF9 413 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 BACH2Q9BYV9 841 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 USP16Q9Y5T5 823 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 UFL1O94874 794 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 SETQ01105 290 aaPredicted RBP7.54□□□□□ -1.2
LINC01043-201ENST00000565936 SLC9C2Q5TAH2 1124 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 DPP8Q6V1X1 898 aaPredicted RBP7.54□□□□□ -1.2
LINC01043-201ENST00000565936 METTL22Q9BUU2 404 aaPredicted RBP7.54□□□□□ -1.2
LINC01043-201ENST00000565936 PICK1Q9NRD5 415 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 PICALMQ13492 652 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 FKBP15Q5T1M5 1219 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 KANK3Q6NY19 840 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 WDR66Q8TBY9 1149 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 PAG1Q9NWQ8 432 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 GJA3Q9Y6H8 435 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 RIMBP2O15034 1052 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 CTAGE5O15320 804 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 VPS36Q86VN1 386 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 C8orf58Q8NAV2 365 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 SAMM50Q9Y512 469 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 RTL1A6NKG5 1358 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 RBM26Q5T8P6 1007 aaKnown RBP7.54□□□□□ -1.2
LINC01043-201ENST00000565936 TTC22Q5TAA0 569 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 NIM1KQ8IY84 436 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 VAT1LQ9HCJ6 419 aa7.54□□□□□ -1.2
LINC01043-201ENST00000565936 IL13P35225 146 aa7.53□□□□□ -1.2
LINC01043-201ENST00000565936 PUM3Q15397 648 aaKnown RBP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 USP37Q86T82 979 aa7.53□□□□□ -1.2
LINC01043-201ENST00000565936 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
LINC01043-201ENST00000565936 NAP1L4Q99733 375 aaKnown RBP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 TMOD4Q9NZQ9 345 aa7.53□□□□□ -1.2
LINC01043-201ENST00000565936 PREX2Q70Z35 1606 aa7.53□□□□□ -1.2
LINC01043-201ENST00000565936 HIBADHP31937 336 aaKnown RBP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 EIF5P55010 431 aaKnown RBP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 NCBP1Q09161 790 aaKnown RBP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 DPY19L2Q6NUT2 758 aa7.53□□□□□ -1.2
LINC01043-201ENST00000565936 JARID2Q92833 1246 aaPredicted RBP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 UPF3BQ9BZI7 483 aaKnown RBP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 TBC1D22AQ8WUA7 517 aa7.53□□□□□ -1.2
LINC01043-201ENST00000565936 SEPT11Q9NVA2 429 aaKnown RBP7.53□□□□□ -1.2
LINC01043-201ENST00000565936 CFAP65Q6ZU64 1925 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms