RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 ABCA10Q8WWZ4 1543 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 NAIPQ13075 1403 aa6.42□□□□□ -1.38
CAPN3-212ENST00000564503 ARHGEF11O15085 1522 aa6.42□□□□□ -1.38
CAPN3-212ENST00000564503 GNB5O14775 395 aa6.42□□□□□ -1.38
CAPN3-212ENST00000564503 MSTNO14793 375 aa6.42□□□□□ -1.38
CAPN3-212ENST00000564503 ANKMY2Q8IV38 441 aa6.42□□□□□ -1.38
CAPN3-212ENST00000564503 HIRIP3Q9BW71 556 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-212ENST00000564503 MYOM3Q5VTT5 1437 aa6.42□□□□□ -1.38
CAPN3-212ENST00000564503 AKNAQ7Z591 1439 aa6.42□□□□□ -1.38
CAPN3-212ENST00000564503 GRIN2BQ13224 1484 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 TCOF1Q13428 1488 aaKnown RBP6.41□□□□□ -1.38
CAPN3-212ENST00000564503 KDM6BO15054 1643 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 FAM196BA6NMK8 535 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L15C9J2P7 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L10C9JJH3 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L13C9JLJ4 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L12C9JPN9 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L11C9JVI0 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L21D6R901 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L18D6R9N7 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L22D6RA61 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L17D6RBQ6 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L19D6RCP7 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L20D6RJB6 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 PIK3R2O00459 728 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 USP17L24Q0WX57 530 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 ALYREFQ86V81 257 aaKnown RBP6.41□□□□□ -1.38
CAPN3-212ENST00000564503 NGLY1Q96IV0 654 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 MDFIQ99750 246 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 SPOCK3Q9BQ16 436 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 BRD7Q9NPI1 651 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 CROCC2H7BZ55 1655 aa6.41□□□□□ -1.38
CAPN3-212ENST00000564503 VIRMAQ69YN4 1812 aaKnown RBP6.41□□□□□ -1.38
CAPN3-212ENST00000564503 LAMC3Q9Y6N6 1575 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 NESP48681 1621 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 KIF14Q15058 1648 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 E9PCH4 1651 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 ELOA3CA0A087WX78 387 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-212ENST00000564503 ELOA3DA6NLF2 546 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-212ENST00000564503 SIN3BO75182 1162 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 KCNQ4P56696 695 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 TYRO3Q06418 890 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 SPEM2Q0P670 501 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 ELOA3BQ3SY89 546 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 CFAP70Q5T0N1 1121 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 ELOA3Q8NG57 546 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 KCNH4Q9UQ05 1017 aa6.4□□□□□ -1.38
CAPN3-212ENST00000564503 PTPRKQ15262 1439 aa6.4□□□□□ -1.39
CAPN3-212ENST00000564503 DNMT1P26358 1616 aaKnown RBP6.39□□□□□ -1.39
CAPN3-212ENST00000564503 ITSN2Q9NZM3 1697 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 ADARB2-AS1A8MUL3 147 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 ALAS2P22557 587 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 IGFBP4P22692 258 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 BTLAQ7Z6A9 289 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 MTUS2Q5JR59 1369 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 CADPSQ9ULU8 1353 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 NCOA1Q15788 1441 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 TOPBP1Q92547 1522 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 BCORL1Q5H9F3 1711 aa6.39□□□□□ -1.39
CAPN3-212ENST00000564503 PROCP04070 461 aa6.38□□□□□ -1.39
CAPN3-212ENST00000564503 DEKP35659 375 aaKnown RBP6.38□□□□□ -1.39
CAPN3-212ENST00000564503 IRX6P78412 446 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-212ENST00000564503 CDCA8Q53HL2 280 aa6.38□□□□□ -1.39
CAPN3-212ENST00000564503 RAB44Q7Z6P3 723 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-212ENST00000564503 ZBED9Q6R2W3 1325 aa6.38□□□□□ -1.39
CAPN3-212ENST00000564503 DENND4BO75064 1496 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-212ENST00000564503 POLA1P09884 1462 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-212ENST00000564503 FANCD2Q9BXW9 1451 aa6.37□□□□□ -1.39
CAPN3-212ENST00000564503 WASHC2AQ641Q2 1341 aa6.37□□□□□ -1.39
CAPN3-212ENST00000564503 HIF1AQ16665 826 aa6.37□□□□□ -1.39
CAPN3-212ENST00000564503 RTN1Q16799 776 aa6.37□□□□□ -1.39
CAPN3-212ENST00000564503 TNFRSF25Q93038 417 aa6.37□□□□□ -1.39
CAPN3-212ENST00000564503 TRIM11Q96F44 468 aa6.37□□□□□ -1.39
CAPN3-212ENST00000564503 PLVAPQ9BX97 442 aa6.37□□□□□ -1.39
CAPN3-212ENST00000564503 NOP53Q9NZM5 478 aaKnown RBP6.37□□□□□ -1.39
CAPN3-212ENST00000564503 KDM5CP41229 1560 aa6.36□□□□□ -1.39
CAPN3-212ENST00000564503 MAGI3Q5TCQ9 1506 aa6.36□□□□□ -1.39
CAPN3-212ENST00000564503 SMG6Q86US8 1419 aaKnown RBP6.36□□□□□ -1.39
CAPN3-212ENST00000564503 CCDC7Q96M83 1385 aa6.36□□□□□ -1.39
CAPN3-212ENST00000564503 HSPA5P11021 654 aaKnown RBP6.36□□□□□ -1.39
CAPN3-212ENST00000564503 RFX1P22670 979 aa6.36□□□□□ -1.39
CAPN3-212ENST00000564503 WEE1P30291 646 aa6.36□□□□□ -1.39
CAPN3-212ENST00000564503 FAM200AQ8TCP9 573 aa6.36□□□□□ -1.39
CAPN3-212ENST00000564503 DMGDHQ9UI17 866 aaKnown RBP6.36□□□□□ -1.39
CAPN3-212ENST00000564503 BCS1LQ9Y276 419 aa6.36□□□□□ -1.39
CAPN3-212ENST00000564503 NOP58Q9Y2X3 529 aaKnown RBP6.36□□□□□ -1.39
CAPN3-212ENST00000564503 STARD13Q9Y3M8 1113 aa6.36□□□□□ -1.39
CAPN3-212ENST00000564503 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
CAPN3-212ENST00000564503 C1QTNF9BB2RNN3 333 aa6.35□□□□□ -1.39
CAPN3-212ENST00000564503 IER5Q5VY09 327 aa6.35□□□□□ -1.39
CAPN3-212ENST00000564503 BHMTQ93088 406 aa6.35□□□□□ -1.39
CAPN3-212ENST00000564503 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
CAPN3-212ENST00000564503 RPRD2Q5VT52 1461 aaKnown RBP6.34□□□□□ -1.39
CAPN3-212ENST00000564503 TEX14Q8IWB6 1497 aa6.34□□□□□ -1.39
CAPN3-212ENST00000564503 RAD54L2Q9Y4B4 1467 aa6.34□□□□□ -1.39
CAPN3-212ENST00000564503 TGFBR3LH3BV60 316 aa6.34□□□□□ -1.39
CAPN3-212ENST00000564503 M0R082 166 aa6.34□□□□□ -1.39
CAPN3-212ENST00000564503 ADH7P40394 386 aa6.34□□□□□ -1.39
CAPN3-212ENST00000564503 CD163Q86VB7 1156 aa6.34□□□□□ -1.39
CAPN3-212ENST00000564503 MICALL1Q8N3F8 863 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms