RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 KIF4BQ2VIQ3 1234 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 CEP63Q96MT8 703 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 CLIP2Q9UDT6 1046 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 MORC2Q9Y6X9 1032 aaPredicted RBP6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 CEP104O60308 925 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 ZBTB17Q13105 803 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 SDCCAG8Q86SQ7 713 aaPredicted RBP6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 ZNF280CQ8ND82 737 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 USP6NLQ92738 828 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 DNAI2Q9GZS0 605 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 DHX36Q9H2U1 1008 aaKnown RBP6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 TMEM63CQ9P1W3 806 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 SEL1LQ9UBV2 794 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 PTPRMP28827 1452 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 TTC37Q6PGP7 1564 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 PREX1Q8TCU6 1659 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 A0A1B0GUA9 196 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 ERCC5P28715 1186 aaPredicted RBP6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 SLC7A5Q01650 507 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 BIRC3Q13489 604 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 PPP1R9BQ96SB3 815 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 STK31Q9BXU1 1019 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 FHOD3Q2V2M9 1422 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 RAPGEF6Q8TEU7 1601 aa6.88□□□□□ -1.31
TUBGCP4-207ENST00000563963 NF2P35240 595 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 GTF2F1P35269 517 aaKnown RBP eCLIP6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 DCTN1Q14203 1278 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 PLEKHG4BQ96PX9 1271 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 LRRCC1Q9C099 1032 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 NUDCQ9Y266 331 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 SAMD9Q5K651 1589 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 SBNO2Q9Y2G9 1366 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 TOM1O60784 492 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 MAGEA9P43362 315 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 PTPROQ16827 1216 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 SKOR2Q2VWA4 1001 aaPredicted RBP6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 MYSM1Q5VVJ2 828 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 DUSP9Q99956 384 aaKnown RBP6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 LRRFIP2Q9Y608 721 aaKnown RBP6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 MAP3K1Q13233 1512 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 PIP4K2BP78356 416 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 PARP10Q53GL7 1025 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 SMARCC1Q92922 1105 aaPredicted RBP6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 SH3GL1Q99961 368 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 N6AMT1Q9Y5N5 214 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 ARHGAP35Q9NRY4 1499 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 RLBP1P12271 317 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 KCTD2Q14681 263 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 SEPT2Q15019 361 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 DPH6Q7L8W6 267 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 NLRP13Q86W25 1043 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 CLASRPQ8N2M8 674 aaKnown RBP6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 TAOK3Q9H2K8 898 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 COMMD8Q9NX08 183 aa6.87□□□□□ -1.31
TUBGCP4-207ENST00000563963 MMEP08473 750 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 SLC4A3P48751 1232 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 TMEM110Q86TL2 294 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 HS6ST3Q8IZP7 471 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 IP6K2Q9UHH9 426 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 ATP6V0A2Q9Y487 856 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 CNTLNQ9NXG0 1405 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 FAM135AQ9P2D6 1515 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 FMNL1O95466 1100 aaPredicted RBP6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 HARSP12081 509 aaKnown RBP6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 AKNAD1Q5T1N1 836 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 CCDC191Q8NCU4 936 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 MIEF2Q96C03 454 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 MYO6Q9UM54 1294 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 ZKSCAN5Q9Y2L8 839 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 MRFAP1Q9Y605 127 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 ZFYVE16Q7Z3T8 1539 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 F8VZ95 297 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 MTA2O94776 668 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 RRM1P23921 792 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 RRP12Q5JTH9 1297 aaKnown RBP6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 DUSP27Q5VZP5 1158 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 ANKRD13DQ6ZTN6 518 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 SLC39A3Q9BRY0 314 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 CFAP45Q9UL16 551 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 DENND4BO75064 1496 aaPredicted RBP6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 PRXQ9BXM0 1461 aa6.86□□□□□ -1.31
TUBGCP4-207ENST00000563963 MYCLP1P12525 358 aaPredicted RBP6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 GCKP35557 465 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 TPM4P67936 248 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 NEDD9Q14511 834 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 ENOX2Q16206 610 aaKnown RBP6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 KIAA0753Q2KHM9 967 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 SAMD14Q8IZD0 417 aaPredicted RBP6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 GABPB2Q8TAK5 448 aaPredicted RBP6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 ANKRD24Q8TF21 1146 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 STAG1Q8WVM7 1258 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 KIAA1522Q9P206 1035 aaPredicted RBP6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 IL4RP24394 825 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 PEX5LQ8IYB4 626 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 NEK9Q8TD19 979 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 CENPTQ96BT3 561 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 YIPF2Q9BWQ6 316 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 FAM107BQ9H098 131 aa6.85□□□□□ -1.31
TUBGCP4-207ENST00000563963 V9GYY5 206 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms