RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SPATA31A5Q5VU36 1347 aa6.94□□□□□ -1.3
HERPUD1-207ENST00000563781 SPATA31A7Q8IWB4 1347 aa6.94□□□□□ -1.3
HERPUD1-207ENST00000563781 KDRP35968 1356 aa6.94□□□□□ -1.3
HERPUD1-207ENST00000563781 DISP2A7MBM2 1401 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 CRB1P82279 1406 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 GPR37L1O60883 481 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 CSB-PGBD3P0DP91 1061 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 TMCO4Q5TGY1 634 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 PDXDC2PQ6P474 469 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 ZNF598Q86UK7 904 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 USHBP1Q8N6Y0 703 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 ZNF511Q8NB15 262 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 PNISRQ8TF01 805 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 GPKOWQ92917 476 aaPredicted RBP eCLIP6.93□□□□□ -1.32e-6■□□□□ 10.1
HERPUD1-207ENST00000563781 MRS2Q9HD23 443 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 NLRP2Q9NX02 1062 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 SPATA31A1Q5TZJ5 1347 aa6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 ZC3H4Q9UPT8 1303 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 FAM208AQ9UK61 1670 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-207ENST00000563781 GLI3P10071 1580 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 WNT7BP56706 349 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 EVA1CP58658 441 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 LINC01559Q495D7 138 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 NBPF14Q5TI25 921 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 TOM1L2Q6ZVM7 507 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 PNMA1Q8ND90 353 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 POM121Q96HA1 1249 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 GDPD2Q9HCC8 539 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 PRM3Q9NNZ6 103 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 TRPC5Q9UL62 973 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 TBC1D2BQ9UPU7 963 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 COG6Q9Y2V7 657 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 RGPD5Q99666 1765 aa6.92□□□□□ -1.3
HERPUD1-207ENST00000563781 MEGF6O75095 1541 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 U2SURPO15042 1029 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 HMOX1P09601 288 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 U2AF1L5P0DN76 240 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 U2AF1Q01081 240 aaKnown RBP eCLIP6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 ZNF697Q5TEC3 545 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 ZNF772Q68DY9 489 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 SULT6B1Q6IMI4 303 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 SH3BP5LQ7L8J4 393 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 TCP11L2Q8N4U5 519 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 ADAMTS8Q9UP79 889 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 NUDCQ9Y266 331 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 OVOS2A0A0G2JMS6 1433 aa6.91□□□□□ -1.3
HERPUD1-207ENST00000563781 PATL2C9JE40 543 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 PDE4CQ08493 712 aa6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 WDR43Q15061 677 aaKnown RBP eCLIP6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 RC3H1Q5TC82 1133 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 SH3RF1Q7Z6J0 888 aa6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 RETREG2Q8NC44 543 aa6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 FOXJ1Q92949 421 aa6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 QTRT2Q9H974 415 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 USP35Q9P2H5 1018 aa6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 THRAP3Q9Y2W1 955 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 GPSM3Q9Y4H4 160 aa6.9□□□□□ -1.3
HERPUD1-207ENST00000563781 IL2RBP14784 551 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 PRKAR2BP31323 418 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 MFAP1P55081 439 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 RBM6P78332 1123 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 PTK2Q05397 1052 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 IRF5Q13568 498 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 C4orf48Q5BLP8 95 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 PLEKHF1Q96S99 279 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 OCSTAMPQ9BR26 566 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 PKD2L1Q9P0L9 805 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 PLEKHG2Q9H7P9 1386 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 TNS2Q63HR2 1409 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 THSD7AQ9UPZ6 1657 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 RGPD2P0DJD1 1756 aa6.89□□□□□ -1.31
HERPUD1-207ENST00000563781 SRCAPQ6ZRS2 3230 aa6.88□□□□□ -1.31
HERPUD1-207ENST00000563781 RGS12O14924 1447 aa6.88□□□□□ -1.31
HERPUD1-207ENST00000563781 WNT7AO00755 349 aa6.88□□□□□ -1.31
HERPUD1-207ENST00000563781 GDF9O60383 454 aa6.88□□□□□ -1.31
HERPUD1-207ENST00000563781 RAPGEF4Q8WZA2 1011 aa6.88□□□□□ -1.31
HERPUD1-207ENST00000563781 PHACTR3Q96KR7 559 aa6.88□□□□□ -1.31
HERPUD1-207ENST00000563781 ZBBXA8MT70 800 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 TATP17735 454 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 ABL2P42684 1182 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 AGERQ15109 404 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 MTHFSDQ2M296 383 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 TRIM67Q6ZTA4 783 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 CCDC146Q8IYE0 955 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 FAM9BQ8IZU0 186 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 ARHGAP9Q9BRR9 750 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 CDCA7Q9BWT1 371 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 EP400Q96L91 3159 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 LRRC37A3O60309 1634 aa6.87□□□□□ -1.31
HERPUD1-207ENST00000563781 WNK3Q9BYP7 1800 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 CYP27B1O15528 508 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 SIAH2O43255 324 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 FBXO45P0C2W1 286 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms