RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 DGKZQ13574 1117 aa9.09□□□□□ -0.95
LRRC28-220ENST00000561253 BICDL1Q6ZP65 573 aa9.09□□□□□ -0.95
LRRC28-220ENST00000561253 KIFC2Q96AC6 838 aa9.09□□□□□ -0.95
LRRC28-220ENST00000561253 ARHGEF40Q8TER5 1519 aa9.09□□□□□ -0.95
LRRC28-220ENST00000561253 INO80Q9ULG1 1556 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-220ENST00000561253 PTPRKQ15262 1439 aa9.08□□□□□ -0.96
LRRC28-220ENST00000561253 CCDC27Q2M243 656 aa9.08□□□□□ -0.96
LRRC28-220ENST00000561253 STIM2Q9P246 746 aa9.08□□□□□ -0.96
LRRC28-220ENST00000561253 LRFN2Q9ULH4 789 aa9.08□□□□□ -0.96
LRRC28-220ENST00000561253 ZFYVE16Q7Z3T8 1539 aa9.08□□□□□ -0.96
LRRC28-220ENST00000561253 RTEL1-TNFRSF6BF6WH68 1400 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 KIDINS220Q9ULH0 1771 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 FAM13AO94988 1023 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 BRD2P25440 801 aaKnown RBP9.07□□□□□ -0.96
LRRC28-220ENST00000561253 MSX1P28360 303 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 HIF1AQ16665 826 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 C11orf91Q3C1V1 193 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 ARSJQ5FYB0 599 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-220ENST00000561253 KLK14Q9P0G3 267 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 DYRK1BQ9Y463 629 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 SHANK2Q9UPX8 1470 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
LRRC28-220ENST00000561253 DAPK1P53355 1430 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 DNMT1P26358 1616 aaKnown RBP9.06□□□□□ -0.96
LRRC28-220ENST00000561253 SOBPA7XYQ1 873 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 TNFRSF10BO14763 440 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 ATP4AP20648 1035 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 MPSTP25325 297 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 MFAP1P55081 439 aaKnown RBP9.06□□□□□ -0.96
LRRC28-220ENST00000561253 ABTB2Q8N961 1025 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-220ENST00000561253 NEUROD4Q9HD90 331 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 GPC6Q9Y625 555 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-220ENST00000561253 DIP2CQ9Y2E4 1556 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 MAST1Q9Y2H9 1570 aa9.06□□□□□ -0.96
LRRC28-220ENST00000561253 ATP7AQ04656 1500 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 ABCA6Q8N139 1617 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 REREQ9P2R6 1566 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 PGBD3Q8N328 593 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 IFT43Q96FT9 208 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 TRIM47Q96LD4 638 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 GPAMQ9HCL2 828 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 GMPR2Q9P2T1 348 aaKnown RBP9.05□□□□□ -0.96
LRRC28-220ENST00000561253 SIGLEC1Q9BZZ2 1709 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 C9orf84Q5VXU9 1444 aa9.05□□□□□ -0.96
LRRC28-220ENST00000561253 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
LRRC28-220ENST00000561253 PLXNC1O60486 1568 aa9.04□□□□□ -0.96
LRRC28-220ENST00000561253 ATP10AO60312 1499 aa9.04□□□□□ -0.96
LRRC28-220ENST00000561253 ADGRL2O95490 1459 aa9.04□□□□□ -0.96
LRRC28-220ENST00000561253 F11P03951 625 aa9.04□□□□□ -0.96
LRRC28-220ENST00000561253 NPR3P17342 541 aa9.04□□□□□ -0.96
LRRC28-220ENST00000561253 AAMPQ13685 434 aa9.04□□□□□ -0.96
LRRC28-220ENST00000561253 ANKIB1Q9P2G1 1089 aa9.04□□□□□ -0.96
LRRC28-220ENST00000561253 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
LRRC28-220ENST00000561253 PTSQ03393 145 aa9.03□□□□□ -0.96
LRRC28-220ENST00000561253 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
LRRC28-220ENST00000561253 ALKBH2Q6NS38 261 aa9.03□□□□□ -0.96
LRRC28-220ENST00000561253 C7orf43Q8WVR3 580 aa9.03□□□□□ -0.96
LRRC28-220ENST00000561253 SUSD3Q96L08 255 aa9.03□□□□□ -0.96
LRRC28-220ENST00000561253 ZIC5Q96T25 663 aa9.03□□□□□ -0.96
LRRC28-220ENST00000561253 NCOA1Q15788 1441 aa9.03□□□□□ -0.96
LRRC28-220ENST00000561253 AGLP35573 1532 aa9.02□□□□□ -0.97
LRRC28-220ENST00000561253 CROCC2H7BZ55 1655 aa9.02□□□□□ -0.97
LRRC28-220ENST00000561253 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.97
LRRC28-220ENST00000561253 EIF1AXP47813 144 aaKnown RBP9.02□□□□□ -0.97
LRRC28-220ENST00000561253 RUBCNLQ9H714 662 aa9.02□□□□□ -0.97
LRRC28-220ENST00000561253 A0A1W2PNR3 127 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 C11orf95C9JLR9 678 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-220ENST00000561253 TGFBR3LH3BV60 316 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
LRRC28-220ENST00000561253 ARHGAP4P98171 946 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 FAM50AQ14320 339 aaKnown RBP9.01□□□□□ -0.97
LRRC28-220ENST00000561253 ECM1Q16610 540 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 LRRC69Q6ZNQ3 347 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 RIPOR1Q6ZS17 1223 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 ETFBKMTQ8IXQ9 262 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 HSH2DQ96JZ2 352 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 A2MP01023 1474 aa9.01□□□□□ -0.97
LRRC28-220ENST00000561253 ROCK1Q13464 1354 aa9□□□□□ -0.97
LRRC28-220ENST00000561253 DHX29Q7Z478 1369 aaKnown RBP9□□□□□ -0.97
LRRC28-220ENST00000561253 EFHC2Q5JST6 749 aa9□□□□□ -0.97
LRRC28-220ENST00000561253 TREML1Q86YW5 311 aa9□□□□□ -0.97
LRRC28-220ENST00000561253 ZNF280CQ8ND82 737 aa9□□□□□ -0.97
LRRC28-220ENST00000561253 CRISPLD1Q9H336 500 aa9□□□□□ -0.97
LRRC28-220ENST00000561253 BCS1LQ9Y276 419 aa9□□□□□ -0.97
LRRC28-220ENST00000561253 SLC35F4A4IF30 521 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 ZBTB39O15060 712 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 MICAL2O94851 1124 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 TSPY4P0CV99 314 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 TSPY10P0CW01 314 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
LRRC28-220ENST00000561253 MAPK1P28482 360 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 ZAP70P43403 619 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 FAM26DQ5JW98 314 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 IER5Q5VY09 327 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 KLRG1Q96E93 195 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 DCTN4Q9UJW0 460 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 KIF15Q9NS87 1388 aa8.99□□□□□ -0.97
LRRC28-220ENST00000561253 ADGBQ8N7X0 1667 aa8.98□□□□□ -0.97
LRRC28-220ENST00000561253 NDUFB5O43674 189 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms