RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
GABPB1-211ENST00000561010 DZIP3Q86Y13 1208 aaKnown RBP9.65□□□□□ -0.86
GABPB1-211ENST00000561010 TTLL6Q8N841 843 aa9.65□□□□□ -0.86
GABPB1-211ENST00000561010 THUMPD2Q9BTF0 503 aaKnown RBP9.65□□□□□ -0.86
GABPB1-211ENST00000561010 FAM177BA6PVY3 158 aa9.64□□□□□ -0.87
GABPB1-211ENST00000561010 NBPF26B4DH59 902 aa9.64□□□□□ -0.87
GABPB1-211ENST00000561010 C21orf2O43822 256 aa9.64□□□□□ -0.87
GABPB1-211ENST00000561010 IL6STP40189 918 aaPredicted RBP9.64□□□□□ -0.87
GABPB1-211ENST00000561010 NBPF10Q6P3W6 841 aaKnown RBP9.64□□□□□ -0.87
GABPB1-211ENST00000561010 C16orf71Q8IYS4 520 aaPredicted RBP9.64□□□□□ -0.87
GABPB1-211ENST00000561010 NBPF15Q8N660 670 aa9.64□□□□□ -0.87
GABPB1-211ENST00000561010 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
GABPB1-211ENST00000561010 KDM2BQ8NHM5 1336 aa9.63□□□□□ -0.87
GABPB1-211ENST00000561010 NPHP1O15259 732 aa9.63□□□□□ -0.87
GABPB1-211ENST00000561010 RTF1Q92541 710 aaKnown RBP9.63□□□□□ -0.87
GABPB1-211ENST00000561010 TEX13AQ9BXU3 409 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-211ENST00000561010 LHX6Q9UPM6 363 aa9.63□□□□□ -0.87
GABPB1-211ENST00000561010 SCN4AP35499 1836 aa9.62□□□□□ -0.87
GABPB1-211ENST00000561010 LMNB1P20700 586 aa9.62□□□□□ -0.87
GABPB1-211ENST00000561010 APLP1P51693 650 aa9.62□□□□□ -0.87
GABPB1-211ENST00000561010 OLFM4Q6UX06 510 aa9.62□□□□□ -0.87
GABPB1-211ENST00000561010 NGEFQ8N5V2 710 aa9.62□□□□□ -0.87
GABPB1-211ENST00000561010 DNAJC5GQ8N7S2 189 aa9.62□□□□□ -0.87
GABPB1-211ENST00000561010 CNBD1Q8NA66 436 aa9.62□□□□□ -0.87
GABPB1-211ENST00000561010 RBM46Q8TBY0 533 aaKnown RBP9.62□□□□□ -0.87
GABPB1-211ENST00000561010 SETDB2Q96T68 719 aa9.62□□□□□ -0.87
GABPB1-211ENST00000561010 SNRPA1P09661 255 aaKnown RBP9.61□□□□□ -0.87
GABPB1-211ENST00000561010 PDE6BP35913 854 aa9.61□□□□□ -0.87
GABPB1-211ENST00000561010 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
GABPB1-211ENST00000561010 HLFQ16534 295 aa9.61□□□□□ -0.87
GABPB1-211ENST00000561010 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
GABPB1-211ENST00000561010 BRIP1Q9BX63 1249 aa9.61□□□□□ -0.87
GABPB1-211ENST00000561010 PCNTO95613 3336 aa9.61□□□□□ -0.87
GABPB1-211ENST00000561010 POLR2AP24928 1970 aaKnown RBP9.61□□□□□ -0.87
GABPB1-211ENST00000561010 POTECB2RU33 542 aa9.6□□□□□ -0.87
GABPB1-211ENST00000561010 TAF7Q15545 349 aaPredicted RBP9.6□□□□□ -0.87
GABPB1-211ENST00000561010 PRPF40BQ6NWY9 871 aaKnown RBP9.6□□□□□ -0.87
GABPB1-211ENST00000561010 NPM2Q86SE8 214 aaKnown RBP9.6□□□□□ -0.87
GABPB1-211ENST00000561010 NBPF5PQ86XG9 351 aaPredicted RBP9.6□□□□□ -0.87
GABPB1-211ENST00000561010 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
GABPB1-211ENST00000561010 NIP7Q9Y221 180 aaKnown RBP eCLIP9.6□□□□□ -0.87
GABPB1-211ENST00000561010 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
GABPB1-211ENST00000561010 GLTPD2A6NH11 291 aa9.59□□□□□ -0.87
GABPB1-211ENST00000561010 SRGNP10124 158 aa9.59□□□□□ -0.87
GABPB1-211ENST00000561010 ST5P78524 1137 aa9.59□□□□□ -0.87
GABPB1-211ENST00000561010 ERFEQ4G0M1 354 aa9.59□□□□□ -0.87
GABPB1-211ENST00000561010 RRP7AQ9Y3A4 280 aaKnown RBP9.59□□□□□ -0.87
GABPB1-211ENST00000561010 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
GABPB1-211ENST00000561010 TRPM7Q96QT4 1865 aa9.59□□□□□ -0.87
GABPB1-211ENST00000561010 MYL6BP14649 208 aa9.58□□□□□ -0.88
GABPB1-211ENST00000561010 IFFO2Q5TF58 517 aa9.58□□□□□ -0.88
GABPB1-211ENST00000561010 STYK1Q6J9G0 422 aa9.58□□□□□ -0.88
GABPB1-211ENST00000561010 TTLL7Q6ZT98 887 aa9.58□□□□□ -0.88
GABPB1-211ENST00000561010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.58□□□□□ -0.88
GABPB1-211ENST00000561010 NUTM1Q86Y26 1132 aa9.58□□□□□ -0.88
GABPB1-211ENST00000561010 DDX12PQ92771 950 aa9.58□□□□□ -0.88
GABPB1-211ENST00000561010 DDX60Q8IY21 1712 aaKnown RBP9.58□□□□□ -0.88
GABPB1-211ENST00000561010 COL4A5P29400 1685 aa9.58□□□□□ -0.88
GABPB1-211ENST00000561010 LTBP1Q14766 1721 aa9.57□□□□□ -0.88
GABPB1-211ENST00000561010 SPEF2Q9C093 1822 aa9.57□□□□□ -0.88
GABPB1-211ENST00000561010 HTATSF1O43719 755 aaKnown RBP9.57□□□□□ -0.88
GABPB1-211ENST00000561010 DDNO94850 711 aaPredicted RBP9.57□□□□□ -0.88
GABPB1-211ENST00000561010 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
GABPB1-211ENST00000561010 GPTP24298 496 aa9.57□□□□□ -0.88
GABPB1-211ENST00000561010 FSTL1Q12841 308 aa9.57□□□□□ -0.88
GABPB1-211ENST00000561010 NFE2L2Q16236 605 aa9.57□□□□□ -0.88
GABPB1-211ENST00000561010 SMC1BQ8NDV3 1235 aa9.57□□□□□ -0.88
GABPB1-211ENST00000561010 MASTLQ96GX5 879 aa9.57□□□□□ -0.88
GABPB1-211ENST00000561010 TAOK3Q9H2K8 898 aa9.57□□□□□ -0.88
GABPB1-211ENST00000561010 ADAMTSL1Q8N6G6 1762 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 ANXA1P04083 346 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 EIF4A1P60842 406 aaKnown RBP9.56□□□□□ -0.88
GABPB1-211ENST00000561010 CLEC4GQ6UXB4 293 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 C7orf43Q8WVR3 580 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 ZNF428Q96B54 188 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 ZBTB3Q9H5J0 574 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 ZNF277Q9NRM2 450 aaPredicted RBP9.56□□□□□ -0.88
GABPB1-211ENST00000561010 ZNF652Q9Y2D9 606 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 UBN2Q6ZU65 1347 aa9.56□□□□□ -0.88
GABPB1-211ENST00000561010 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
GABPB1-211ENST00000561010 NEFMP07197 916 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 NPR1P16066 1061 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 PBX2P40425 430 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 CCDC146Q8IYE0 955 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 NECTIN2Q92692 538 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 MAP3K15Q6ZN16 1313 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 ZNF541Q9H0D2 1346 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 LTBP3Q9NS15 1303 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 MAPK8IP3Q9UPT6 1336 aa9.55□□□□□ -0.88
GABPB1-211ENST00000561010 TCERG1O14776 1098 aaKnown RBP9.54□□□□□ -0.88
GABPB1-211ENST00000561010 EIF2S2P20042 333 aaKnown RBP9.54□□□□□ -0.88
GABPB1-211ENST00000561010 DDX10Q13206 875 aaKnown RBP9.54□□□□□ -0.88
GABPB1-211ENST00000561010 KRT24Q2M2I5 525 aa9.54□□□□□ -0.88
GABPB1-211ENST00000561010 PROSER3Q2NL68 480 aa9.54□□□□□ -0.88
GABPB1-211ENST00000561010 TPRNQ4KMQ1 711 aa9.54□□□□□ -0.88
GABPB1-211ENST00000561010 TPTE2Q6XPS3 522 aa9.54□□□□□ -0.88
GABPB1-211ENST00000561010 PDZRN3Q9UPQ7 1066 aa9.54□□□□□ -0.88
GABPB1-211ENST00000561010 COL4A1P02462 1669 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms