RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
CCDC33-209ENST00000560565 PXDNLA1KZ92 1463 aa10.29□□□□□ -0.76
CCDC33-209ENST00000560565 CICQ96RK0 1608 aaPredicted RBP10.29□□□□□ -0.76
CCDC33-209ENST00000560565 ADRA2BP18089 450 aa10.28□□□□□ -0.76
CCDC33-209ENST00000560565 RFC4P35249 363 aa10.28□□□□□ -0.76
CCDC33-209ENST00000560565 MLLT1Q03111 559 aaPredicted RBP10.28□□□□□ -0.76
CCDC33-209ENST00000560565 ZNF790Q6PG37 636 aa10.28□□□□□ -0.76
CCDC33-209ENST00000560565 DNAJC10Q8IXB1 793 aa10.28□□□□□ -0.76
CCDC33-209ENST00000560565 CCDC94Q9BW85 323 aaPredicted RBP10.28□□□□□ -0.76
CCDC33-209ENST00000560565 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
CCDC33-209ENST00000560565 GTPBP4Q9BZE4 634 aaKnown RBP10.28□□□□□ -0.76
CCDC33-209ENST00000560565 SRCIN1Q9C0H9 1055 aa10.28□□□□□ -0.76
CCDC33-209ENST00000560565 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
CCDC33-209ENST00000560565 PDCL2Q8N4E4 241 aa10.27□□□□□ -0.77
CCDC33-209ENST00000560565 ANKRD44Q8N8A2 993 aa10.27□□□□□ -0.77
CCDC33-209ENST00000560565 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.77
CCDC33-209ENST00000560565 OSBPL3Q9H4L5 887 aa10.27□□□□□ -0.77
CCDC33-209ENST00000560565 AFDNP55196 1824 aaKnown RBP10.27□□□□□ -0.77
CCDC33-209ENST00000560565 WDR33Q9C0J8 1336 aaKnown RBP10.27□□□□□ -0.77
CCDC33-209ENST00000560565 TJP1Q07157 1748 aa10.27□□□□□ -0.77
CCDC33-209ENST00000560565 WDR90Q96KV7 1748 aa10.27□□□□□ -0.77
CCDC33-209ENST00000560565 KIF20AO95235 890 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 STARD3NLO95772 234 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
CCDC33-209ENST00000560565 GTF2F1P35269 517 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCDC33-209ENST00000560565 KRT24Q2M2I5 525 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 HDGFL1Q5TGJ6 251 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 INTS5Q6P9B9 1019 aaKnown RBP10.26□□□□□ -0.77
CCDC33-209ENST00000560565 NLGN1Q8N2Q7 840 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 MYRIPQ8NFW9 859 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 ZNF496Q96IT1 587 aaPredicted RBP10.26□□□□□ -0.77
CCDC33-209ENST00000560565 FMNL2Q96PY5 1086 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 TEX13AQ9BXU3 409 aaPredicted RBP10.26□□□□□ -0.77
CCDC33-209ENST00000560565 CCDC87Q9NVE4 849 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 FAM13BQ9NYF5 915 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 KCPQ6ZWJ8 1503 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 AOX1Q06278 1338 aa10.26□□□□□ -0.77
CCDC33-209ENST00000560565 ARFGEF2Q9Y6D5 1785 aa10.25□□□□□ -0.77
CCDC33-209ENST00000560565 PRPF40AO75400 957 aaKnown RBP10.25□□□□□ -0.77
CCDC33-209ENST00000560565 SNRPA1P09661 255 aaKnown RBP10.25□□□□□ -0.77
CCDC33-209ENST00000560565 DNTTIP2Q5QJE6 756 aaKnown RBP10.25□□□□□ -0.77
CCDC33-209ENST00000560565 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
CCDC33-209ENST00000560565 IL17RAQ96F46 866 aa10.25□□□□□ -0.77
CCDC33-209ENST00000560565 DBF4Q9UBU7 674 aaPredicted RBP10.25□□□□□ -0.77
CCDC33-209ENST00000560565 KCNQ3O43525 872 aa10.24□□□□□ -0.77
CCDC33-209ENST00000560565 CCT4P50991 539 aaKnown RBP10.24□□□□□ -0.77
CCDC33-209ENST00000560565 FAM193AP78312 1265 aa10.24□□□□□ -0.77
CCDC33-209ENST00000560565 CUL4AQ13619 759 aa10.24□□□□□ -0.77
CCDC33-209ENST00000560565 TMEM87AQ8NBN3 555 aa10.24□□□□□ -0.77
CCDC33-209ENST00000560565 PIBF1Q8WXW3 757 aa10.24□□□□□ -0.77
CCDC33-209ENST00000560565 HYPKQ9NX55 129 aa10.24□□□□□ -0.77
CCDC33-209ENST00000560565 USP25Q9UHP3 1055 aa10.24□□□□□ -0.77
CCDC33-209ENST00000560565 ZPR1O75312 459 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 BRD1O95696 1058 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 MMP10P09238 476 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 GYS1P13807 737 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 FLIIQ13045 1269 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 SYCP1Q15431 976 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 CCDC183Q5T5S1 534 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 RBSNQ9H1K0 784 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 DDX21Q9NR30 783 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC33-209ENST00000560565 ZBTB1Q9Y2K1 713 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 CD2APQ9Y5K6 639 aa10.23□□□□□ -0.77
CCDC33-209ENST00000560565 CAVIN2O95810 425 aa10.22□□□□□ -0.77
CCDC33-209ENST00000560565 HSPA1AP0DMV8 641 aaKnown RBP10.22□□□□□ -0.77
CCDC33-209ENST00000560565 HSPA1BP0DMV9 641 aaKnown RBP10.22□□□□□ -0.77
CCDC33-209ENST00000560565 HTRA3P83110 453 aa10.22□□□□□ -0.77
CCDC33-209ENST00000560565 DHX8Q14562 1220 aaKnown RBP10.22□□□□□ -0.77
CCDC33-209ENST00000560565 CREBRFQ8IUR6 639 aa10.22□□□□□ -0.77
CCDC33-209ENST00000560565 NLGN2Q8NFZ4 835 aa10.22□□□□□ -0.77
CCDC33-209ENST00000560565 FEZ1Q99689 392 aa10.22□□□□□ -0.77
CCDC33-209ENST00000560565 SRP68Q9UHB9 627 aaKnown RBP10.22□□□□□ -0.77
CCDC33-209ENST00000560565 KIF3AQ9Y496 699 aa10.22□□□□□ -0.77
CCDC33-209ENST00000560565 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.22□□□□□ -0.77
CCDC33-209ENST00000560565 C4AP0C0L4 1744 aa10.21□□□□□ -0.77
CCDC33-209ENST00000560565 ANKRD36CQ5JPF3 1778 aa10.21□□□□□ -0.77
CCDC33-209ENST00000560565 NUP98P52948 1817 aa10.21□□□□□ -0.77
CCDC33-209ENST00000560565 A0A087WZG4 1122 aa10.21□□□□□ -0.77
CCDC33-209ENST00000560565 DDX58O95786 925 aaKnown RBP10.21□□□□□ -0.77
CCDC33-209ENST00000560565 FKBP5Q13451 457 aaPredicted RBP10.21□□□□□ -0.77
CCDC33-209ENST00000560565 NARFQ9UHQ1 456 aa10.21□□□□□ -0.77
CCDC33-209ENST00000560565 PARP3Q9Y6F1 533 aa10.21□□□□□ -0.77
CCDC33-209ENST00000560565 USP42Q9H9J4 1324 aaKnown RBP10.21□□□□□ -0.78
CCDC33-209ENST00000560565 A1BGP04217 495 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 GNAI3P08754 354 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 GSPT1P15170 499 aaKnown RBP10.2□□□□□ -0.78
CCDC33-209ENST00000560565 EIF2S2P20042 333 aaKnown RBP10.2□□□□□ -0.78
CCDC33-209ENST00000560565 COL15A1P39059 1388 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 RGS19P49795 217 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 EIF5P55010 431 aaKnown RBP10.2□□□□□ -0.78
CCDC33-209ENST00000560565 USPL1Q5W0Q7 1092 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 SPTLC3Q9NUV7 552 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 CHPF2Q9P2E5 772 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 HDAC5Q9UQL6 1122 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 ZNF330Q9Y3S2 320 aaPredicted RBP10.2□□□□□ -0.78
CCDC33-209ENST00000560565 USP16Q9Y5T5 823 aa10.2□□□□□ -0.78
CCDC33-209ENST00000560565 SYCE3A1L190 88 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms