RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 NECTIN1Q15223 517 aa29.33■■■□□ 2.29
SHF-207ENST00000560540 VSIG10Q8N0Z9 540 aa29.33■■■□□ 2.29
SHF-207ENST00000560540 TNS2Q63HR2 1409 aa29.33■■■□□ 2.29
SHF-207ENST00000560540 HIP1O00291 1037 aa29.33■■■□□ 2.29
SHF-207ENST00000560540 IFIT2P09913 472 aaKnown RBP29.33■■■□□ 2.29
SHF-207ENST00000560540 CPA1P15085 419 aa29.33■■■□□ 2.29
SHF-207ENST00000560540 PRPF40BQ6NWY9 871 aaKnown RBP29.33■■■□□ 2.29
SHF-207ENST00000560540 LARP6Q9BRS8 491 aaKnown RBP29.33■■■□□ 2.29
SHF-207ENST00000560540 CDCA7Q9BWT1 371 aaPredicted RBP29.33■■■□□ 2.29
SHF-207ENST00000560540 ADCK5Q3MIX3 580 aa29.32■■■□□ 2.28
SHF-207ENST00000560540 HEG1Q9ULI3 1381 aa29.32■■■□□ 2.28
SHF-207ENST00000560540 RBM10P98175 930 aaKnown RBP29.32■■■□□ 2.28
SHF-207ENST00000560540 DDB1Q16531 1140 aa29.32■■■□□ 2.28
SHF-207ENST00000560540 SNRKQ9NRH2 765 aa29.32■■■□□ 2.28
SHF-207ENST00000560540 ZKSCAN1P17029 563 aaPredicted RBP29.31■■■□□ 2.28
SHF-207ENST00000560540 C9orf78Q9NZ63 289 aaPredicted RBP29.31■■■□□ 2.28
SHF-207ENST00000560540 MAP3K2Q9Y2U5 619 aa29.31■■■□□ 2.28
SHF-207ENST00000560540 KDM4AO75164 1064 aa29.3■■■□□ 2.28
SHF-207ENST00000560540 KSR2Q6VAB6 950 aa29.3■■■□□ 2.28
SHF-207ENST00000560540 MRC1P22897 1456 aa29.3■■■□□ 2.28
SHF-207ENST00000560540 ANXA1P04083 346 aa29.3■■■□□ 2.28
SHF-207ENST00000560540 FAM13BQ9NYF5 915 aa29.3■■■□□ 2.28
SHF-207ENST00000560540 DNM1Q05193 864 aaKnown RBP29.29■■■□□ 2.28
SHF-207ENST00000560540 ST3GAL1Q11201 340 aa29.29■■■□□ 2.28
SHF-207ENST00000560540 UTYO14607 1347 aa29.29■■■□□ 2.28
SHF-207ENST00000560540 GLI3P10071 1580 aa29.28■■■□□ 2.28
SHF-207ENST00000560540 CABP4P57796 275 aa29.28■■■□□ 2.28
SHF-207ENST00000560540 SLC39A6Q13433 755 aa29.28■■■□□ 2.28
SHF-207ENST00000560540 GJD4Q96KN9 370 aaPredicted RBP29.28■■■□□ 2.28
SHF-207ENST00000560540 RBM8AQ9Y5S9 174 aaKnown RBP29.28■■■□□ 2.28
SHF-207ENST00000560540 TOGARAM1Q9Y4F4 1720 aa29.28■■■□□ 2.28
SHF-207ENST00000560540 MAP4K1Q92918 833 aa29.27■■■□□ 2.28
SHF-207ENST00000560540 PRIMPOLQ96LW4 560 aa29.27■■■□□ 2.28
SHF-207ENST00000560540 ATRNO75882 1429 aa29.27■■■□□ 2.28
SHF-207ENST00000560540 ME3Q16798 604 aa29.27■■■□□ 2.28
SHF-207ENST00000560540 CREB3L3Q68CJ9 461 aa29.27■■■□□ 2.28
SHF-207ENST00000560540 AACSQ86V21 672 aa29.27■■■□□ 2.28
SHF-207ENST00000560540 PSMA5P28066 241 aa29.26■■■□□ 2.27
SHF-207ENST00000560540 MYRIPQ8NFW9 859 aa29.26■■■□□ 2.27
SHF-207ENST00000560540 GIGYF1O75420 1035 aaPredicted RBP29.25■■■□□ 2.27
SHF-207ENST00000560540 SPTLC3Q9NUV7 552 aa29.25■■■□□ 2.27
SHF-207ENST00000560540 TRPC5Q9UL62 973 aaPredicted RBP29.25■■■□□ 2.27
SHF-207ENST00000560540 PA2G4Q9UQ80 394 aaKnown RBP29.25■■■□□ 2.27
SHF-207ENST00000560540 NOLC1Q14978 699 aaKnown RBP eCLIP29.25■■■□□ 2.27
SHF-207ENST00000560540 MARCH10Q8NA82 808 aaPredicted RBP29.25■■■□□ 2.27
SHF-207ENST00000560540 LINS1Q8NG48 757 aa29.25■■■□□ 2.27
SHF-207ENST00000560540 ELP1O95163 1332 aa29.24■■■□□ 2.27
SHF-207ENST00000560540 ERVV-2B6SEH9 535 aa29.24■■■□□ 2.27
SHF-207ENST00000560540 GIMAP6Q6P9H5 292 aa29.24■■■□□ 2.27
SHF-207ENST00000560540 QTRT2Q9H974 415 aaKnown RBP29.24■■■□□ 2.27
SHF-207ENST00000560540 A0A0G2JS52 829 aa29.24■■■□□ 2.27
SHF-207ENST00000560540 ALDH8A1Q9H2A2 487 aaPredicted RBP29.24■■■□□ 2.27
SHF-207ENST00000560540 VPS37CA5D8V6 355 aaPredicted RBP29.23■■■□□ 2.27
SHF-207ENST00000560540 TPM3P06753 285 aa29.23■■■□□ 2.27
SHF-207ENST00000560540 PDCP20941 246 aa29.23■■■□□ 2.27
SHF-207ENST00000560540 HMGN5P82970 282 aaKnown RBP29.23■■■□□ 2.27
SHF-207ENST00000560540 GRM8O00222 908 aa29.22■■■□□ 2.27
SHF-207ENST00000560540 ANKRD1Q15327 319 aa29.22■■■□□ 2.27
SHF-207ENST00000560540 ZNF790Q6PG37 636 aa29.22■■■□□ 2.27
SHF-207ENST00000560540 TPCN1Q9ULQ1 816 aa29.22■■■□□ 2.27
SHF-207ENST00000560540 MED23Q9ULK4 1368 aa29.22■■■□□ 2.27
SHF-207ENST00000560540 KRT85P78386 507 aa29.22■■■□□ 2.27
SHF-207ENST00000560540 NMIQ13287 307 aaPredicted RBP29.22■■■□□ 2.27
SHF-207ENST00000560540 PROSER3Q2NL68 480 aa29.22■■■□□ 2.27
SHF-207ENST00000560540 SLC27A2O14975 620 aa29.21■■■□□ 2.27
SHF-207ENST00000560540 CCDC192P0DO97 292 aa29.21■■■□□ 2.27
SHF-207ENST00000560540 CWF19L2Q2TBE0 894 aaKnown RBP29.21■■■□□ 2.27
SHF-207ENST00000560540 DNTTIP2Q5QJE6 756 aaKnown RBP29.21■■■□□ 2.27
SHF-207ENST00000560540 RNF20Q5VTR2 975 aa29.21■■■□□ 2.27
SHF-207ENST00000560540 SASH1O94885 1247 aa29.21■■■□□ 2.27
SHF-207ENST00000560540 KCNJ4P48050 445 aa29.21■■■□□ 2.27
SHF-207ENST00000560540 ZNF830Q96NB3 372 aaPredicted RBP29.21■■■□□ 2.27
SHF-207ENST00000560540 TTC12Q9H892 705 aaPredicted RBP29.21■■■□□ 2.27
SHF-207ENST00000560540 KAT6BQ8WYB5 2073 aa29.2■■■□□ 2.27
SHF-207ENST00000560540 LARP1BQ659C4 914 aaKnown RBP29.2■■■□□ 2.26
SHF-207ENST00000560540 SUCLG2Q96I99 432 aa29.2■■■□□ 2.26
SHF-207ENST00000560540 FAM227BQ96M60 508 aa29.2■■■□□ 2.26
SHF-207ENST00000560540 DDX58O95786 925 aaKnown RBP29.19■■■□□ 2.26
SHF-207ENST00000560540 GTF2F1P35269 517 aaKnown RBP eCLIP29.19■■■□□ 2.26
SHF-207ENST00000560540 G3BP1Q13283 466 aaKnown RBP eCLIP29.19■■■□□ 2.26
SHF-207ENST00000560540 EAF2Q96CJ1 260 aaPredicted RBP29.19■■■□□ 2.26
SHF-207ENST00000560540 ZMYND15Q9H091 742 aa29.19■■■□□ 2.26
SHF-207ENST00000560540 NECAB1Q8N987 351 aa29.19■■■□□ 2.26
SHF-207ENST00000560540 KAZALD1Q96I82 304 aa29.19■■■□□ 2.26
SHF-207ENST00000560540 THSD7AQ9UPZ6 1657 aa29.19■■■□□ 2.26
SHF-207ENST00000560540 PRAMEF22A3QJZ6 481 aa29.17■■■□□ 2.26
SHF-207ENST00000560540 BICC1Q9H694 974 aaKnown RBP29.17■■■□□ 2.26
SHF-207ENST00000560540 TPRNQ4KMQ1 711 aa29.17■■■□□ 2.26
SHF-207ENST00000560540 BLOC1S2Q6QNY1 142 aa29.17■■■□□ 2.26
SHF-207ENST00000560540 TTC6Q86TZ1 520 aa29.17■■■□□ 2.26
SHF-207ENST00000560540 HMG20BQ9P0W2 317 aa29.17■■■□□ 2.26
SHF-207ENST00000560540 PIGBQ92521 554 aa29.16■■■□□ 2.26
SHF-207ENST00000560540 ZNF496Q96IT1 587 aaPredicted RBP29.16■■■□□ 2.26
SHF-207ENST00000560540 DDX21Q9NR30 783 aaKnown RBP eCLIP29.16■■■□□ 2.26
SHF-207ENST00000560540 TMOD3Q9NYL9 352 aa29.16■■■□□ 2.26
SHF-207ENST00000560540 RPS6KB1P23443 525 aa29.16■■■□□ 2.26
SHF-207ENST00000560540 C5P01031 1676 aa29.15■■■□□ 2.26
SHF-207ENST00000560540 ITGB4P16144 1822 aa29.15■■■□□ 2.26
SHF-207ENST00000560540 TSGA10IPQ3SY00 556 aa29.15■■■□□ 2.26
SHF-207ENST00000560540 CDC37L1Q7L3B6 337 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms