RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 SAGE1Q9NXZ1 904 aa11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 RRP7AQ9Y3A4 280 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 LRRC37AA6NMS7 1700 aa11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 DDX60Q8IY21 1712 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 ABCC4O15439 1325 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 YDJCA8MPS7 323 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 SLC10A5Q5PT55 438 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 KIF6Q6ZMV9 814 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 SP8Q8IXZ3 490 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 ZBTB3Q9H5J0 574 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 DUOX1Q9NRD9 1551 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 PSME4Q14997 1843 aa11.95□□□□□ -0.5
RABGGTA-217ENST00000560521 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 H7C1D1 291 aa11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 MYL6BP14649 208 aa11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 TNIP1Q15025 636 aa11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 DPP8Q6V1X1 898 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 GIGYF2Q6Y7W6 1299 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 SAMD7Q7Z3H4 446 aa11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 MPNDQ8N594 471 aa11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 CSRNP1Q96S65 589 aa11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 TMX4Q9H1E5 349 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 GBA2Q9HCG7 927 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-217ENST00000560521 BBOX1O75936 387 aa11.93□□□□□ -0.5
RABGGTA-217ENST00000560521 PPP1R42Q7Z4L9 355 aa11.93□□□□□ -0.5
RABGGTA-217ENST00000560521 MICALL2Q8IY33 904 aa11.93□□□□□ -0.5
RABGGTA-217ENST00000560521 CCDC102AQ96A19 550 aa11.93□□□□□ -0.5
RABGGTA-217ENST00000560521 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-217ENST00000560521 EGFRP00533 1210 aa11.92□□□□□ -0.5
RABGGTA-217ENST00000560521 ZNF157P51786 506 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-217ENST00000560521 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-217ENST00000560521 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-217ENST00000560521 KRT26Q7Z3Y9 468 aa11.92□□□□□ -0.5
RABGGTA-217ENST00000560521 CTU1Q7Z7A3 348 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-217ENST00000560521 C2orf69Q8N8R5 385 aa11.92□□□□□ -0.5
RABGGTA-217ENST00000560521 DPF2Q92785 391 aa11.92□□□□□ -0.5
RABGGTA-217ENST00000560521 ADM5C9JUS6 153 aa11.91□□□□□ -0.5
RABGGTA-217ENST00000560521 U2AF1L5P0DN76 240 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-217ENST00000560521 U2AF1Q01081 240 aaKnown RBP eCLIP11.91□□□□□ -0.5
RABGGTA-217ENST00000560521 TBC1D10BQ4KMP7 808 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-217ENST00000560521 HPS5Q9UPZ3 1129 aa11.91□□□□□ -0.5
RABGGTA-217ENST00000560521 PSMD14O00487 310 aa11.9□□□□□ -0.5
RABGGTA-217ENST00000560521 SLC10A3P09131 477 aa11.9□□□□□ -0.5
RABGGTA-217ENST00000560521 PARP10Q53GL7 1025 aa11.9□□□□□ -0.5
RABGGTA-217ENST00000560521 RBM26Q5T8P6 1007 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-217ENST00000560521 UTP14AQ9BVJ6 771 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-217ENST00000560521 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
RABGGTA-217ENST00000560521 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
RABGGTA-217ENST00000560521 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-217ENST00000560521 LRP10Q7Z4F1 713 aa11.89□□□□□ -0.51
RABGGTA-217ENST00000560521 DCPSQ96C86 337 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-217ENST00000560521 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
RABGGTA-217ENST00000560521 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-217ENST00000560521 KCNQ5Q9NR82 932 aa11.89□□□□□ -0.51
RABGGTA-217ENST00000560521 COL4A1P02462 1669 aa11.89□□□□□ -0.51
RABGGTA-217ENST00000560521 GRAPQ13588 217 aa11.88□□□□□ -0.51
RABGGTA-217ENST00000560521 PDIA6Q15084 440 aa11.88□□□□□ -0.51
RABGGTA-217ENST00000560521 DDX46Q7L014 1031 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-217ENST00000560521 GRAPLQ8TC17 118 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-217ENST00000560521 PNISRQ8TF01 805 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-217ENST00000560521 DBNDD1Q9H9R9 158 aa11.88□□□□□ -0.51
RABGGTA-217ENST00000560521 RBBP6Q7Z6E9 1792 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-217ENST00000560521 PAPPA2Q9BXP8 1791 aa11.87□□□□□ -0.51
RABGGTA-217ENST00000560521 RIMBP2O15034 1052 aa11.87□□□□□ -0.51
RABGGTA-217ENST00000560521 RTL9Q8NET4 1388 aa11.87□□□□□ -0.51
RABGGTA-217ENST00000560521 ASTN2O75129 1339 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-217ENST00000560521 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
RABGGTA-217ENST00000560521 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
RABGGTA-217ENST00000560521 NLRP10Q86W26 655 aa11.86□□□□□ -0.51
RABGGTA-217ENST00000560521 RASAL3Q86YV0 1011 aa11.86□□□□□ -0.51
RABGGTA-217ENST00000560521 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-217ENST00000560521 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-217ENST00000560521 MKI67P46013 3256 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 KIAA0100Q14667 2235 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 ECE2O60344 883 aa11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 ANXA1P04083 346 aa11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 RPS12P25398 132 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 PKN2Q16513 984 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 PROSER3Q2NL68 480 aa11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 ZNF296Q8WUU4 475 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 CDCA5Q96FF9 252 aa11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 POLLQ9UGP5 575 aa11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-217ENST00000560521 TBC1D8O95759 1140 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 KIF4BQ2VIQ3 1234 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 TMC4Q7Z404 712 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 GGA3Q9NZ52 723 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 HDAC9Q9UKV0 1011 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 LAMB1P07942 1786 aa11.84□□□□□ -0.51
RABGGTA-217ENST00000560521 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms