RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 NBPF5PQ86XG9 351 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-219ENST00000560483 NBPF15Q8N660 670 aa10.31□□□□□ -0.76
LRRC28-219ENST00000560483 EMILIN3Q9NT22 766 aa10.31□□□□□ -0.76
LRRC28-219ENST00000560483 NIP7Q9Y221 180 aaKnown RBP eCLIP10.31□□□□□ -0.76
LRRC28-219ENST00000560483 CAMTA2O94983 1202 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 BCAMP50895 628 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 DDR1Q08345 913 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 CCDC27Q2M243 656 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 TTLL7Q6ZT98 887 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 ZDHHC16Q969W1 377 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 STK31Q9BXU1 1019 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 CHMP4AQ9BY43 222 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 CHPF2Q9P2E5 772 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
LRRC28-219ENST00000560483 CARMIL3Q8ND23 1372 aa10.29□□□□□ -0.76
LRRC28-219ENST00000560483 A0A0G2JLW4 131 aa10.29□□□□□ -0.76
LRRC28-219ENST00000560483 POLRMTO00411 1230 aaKnown RBP10.29□□□□□ -0.76
LRRC28-219ENST00000560483 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
LRRC28-219ENST00000560483 GPTP24298 496 aa10.29□□□□□ -0.76
LRRC28-219ENST00000560483 XAGE3Q8WTP9 111 aa10.29□□□□□ -0.76
LRRC28-219ENST00000560483 MYH16Q9H6N6 1097 aa10.29□□□□□ -0.76
LRRC28-219ENST00000560483 DBF4Q9UBU7 674 aaPredicted RBP10.29□□□□□ -0.76
LRRC28-219ENST00000560483 BCS1LQ9Y276 419 aa10.29□□□□□ -0.76
LRRC28-219ENST00000560483 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
LRRC28-219ENST00000560483 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 GOLGA8CPA6NN73 597 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 HOXB7P09629 217 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 TM4SF1P30408 202 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 HLFQ16534 295 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 PROSER3Q2NL68 480 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 CCDC30Q5VVM6 783 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 COPS6Q7L5N1 327 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 C8orf58Q8NAV2 365 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 ZNF428Q96B54 188 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 DDX21Q9NR30 783 aaKnown RBP eCLIP10.28□□□□□ -0.76
LRRC28-219ENST00000560483 PCDHGA10Q9Y5H3 936 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 N4BP2Q86UW6 1770 aaPredicted RBP10.28□□□□□ -0.76
LRRC28-219ENST00000560483 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
LRRC28-219ENST00000560483 GOLGB1Q14789 3259 aaKnown RBP10.27□□□□□ -0.76
LRRC28-219ENST00000560483 ZNF853P0CG23 659 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 DPEP1P16444 411 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 TGFB2P61812 414 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 TWISTNBQ3B726 338 aaPredicted RBP10.27□□□□□ -0.77
LRRC28-219ENST00000560483 CLEC4GQ6UXB4 293 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 TPTE2Q6XPS3 522 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 C2CD5Q86YS7 1000 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 ZNF622Q969S3 477 aaKnown RBP eCLIP10.27□□□□□ -0.77
LRRC28-219ENST00000560483 HYPKQ9NX55 129 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 AFDNP55196 1824 aaKnown RBP10.27□□□□□ -0.77
LRRC28-219ENST00000560483 IL16Q14005 1332 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 FANCIQ9NVI1 1328 aa10.27□□□□□ -0.77
LRRC28-219ENST00000560483 BCORQ6W2J9 1755 aa10.26□□□□□ -0.77
LRRC28-219ENST00000560483 ERVV-1B6SEH8 477 aa10.26□□□□□ -0.77
LRRC28-219ENST00000560483 H0YIN7 160 aa10.26□□□□□ -0.77
LRRC28-219ENST00000560483 GRIN3BO60391 1043 aa10.26□□□□□ -0.77
LRRC28-219ENST00000560483 DDX58O95786 925 aaKnown RBP10.26□□□□□ -0.77
LRRC28-219ENST00000560483 CHRNA5P30532 468 aa10.26□□□□□ -0.77
LRRC28-219ENST00000560483 EXOSC9Q06265 439 aaKnown RBP10.26□□□□□ -0.77
LRRC28-219ENST00000560483 NYXQ9GZU5 481 aa10.26□□□□□ -0.77
LRRC28-219ENST00000560483 NUP98P52948 1817 aa10.26□□□□□ -0.77
LRRC28-219ENST00000560483 C10orf71Q711Q0 1435 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 RGS20O76081 388 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 YY1P25490 414 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 PDE6BP35913 854 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 PDIA6Q15084 440 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 HSP90AB3PQ58FF7 597 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 DALRD3Q5D0E6 543 aaKnown RBP10.25□□□□□ -0.77
LRRC28-219ENST00000560483 PRR5LQ6MZQ0 368 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 TSPYL6Q8N831 410 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
LRRC28-219ENST00000560483 PIM2Q9P1W9 311 aa10.25□□□□□ -0.77
LRRC28-219ENST00000560483 LCE2BO14633 110 aa10.24□□□□□ -0.77
LRRC28-219ENST00000560483 YBX3P16989 372 aaKnown RBP eCLIP10.24□□□□□ -0.771e-6■■■□□ 17.7
LRRC28-219ENST00000560483 HNRNPUQ00839 825 aaKnown RBP eCLIP10.24□□□□□ -0.77
LRRC28-219ENST00000560483 GIGYF2Q6Y7W6 1299 aaKnown RBP10.24□□□□□ -0.77
LRRC28-219ENST00000560483 ARHGAP27Q6ZUM4 889 aa10.24□□□□□ -0.77
LRRC28-219ENST00000560483 PPP1R42Q7Z4L9 355 aa10.24□□□□□ -0.77
LRRC28-219ENST00000560483 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
LRRC28-219ENST00000560483 UTRNP46939 3433 aa10.23□□□□□ -0.77
LRRC28-219ENST00000560483 PPP1R3GB7ZBB8 358 aa10.23□□□□□ -0.77
LRRC28-219ENST00000560483 ATP5J2-PTCD1G3V325 749 aa10.23□□□□□ -0.77
LRRC28-219ENST00000560483 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-219ENST00000560483 UTP14AQ9BVJ6 771 aaKnown RBP10.23□□□□□ -0.77
LRRC28-219ENST00000560483 BRIP1Q9BX63 1249 aa10.23□□□□□ -0.77
LRRC28-219ENST00000560483 NBPF3Q9H094 633 aa10.23□□□□□ -0.77
LRRC28-219ENST00000560483 PHAXQ9H814 394 aaKnown RBP10.23□□□□□ -0.77
LRRC28-219ENST00000560483 PXDNLA1KZ92 1463 aa10.23□□□□□ -0.77
LRRC28-219ENST00000560483 KIF13BQ9NQT8 1826 aa10.22□□□□□ -0.77
LRRC28-219ENST00000560483 E9PSI1 815 aa10.22□□□□□ -0.77
LRRC28-219ENST00000560483 GTPBP6O43824 516 aaPredicted RBP10.22□□□□□ -0.77
LRRC28-219ENST00000560483 NEXNQ0ZGT2 675 aa10.22□□□□□ -0.77
LRRC28-219ENST00000560483 FKBP5Q13451 457 aaPredicted RBP10.22□□□□□ -0.77
LRRC28-219ENST00000560483 ERFEQ4G0M1 354 aa10.22□□□□□ -0.77
LRRC28-219ENST00000560483 PARP10Q53GL7 1025 aa10.22□□□□□ -0.77
LRRC28-219ENST00000560483 RTL5Q5HYW3 569 aaPredicted RBP10.22□□□□□ -0.77
LRRC28-219ENST00000560483 PLBD2Q8NHP8 589 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms