RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 ZFYVE28Q9HCC9 887 aa9.34□□□□□ -0.91
MARK3-220ENST00000560417 PARP2Q9UGN5 583 aa9.34□□□□□ -0.91
MARK3-220ENST00000560417 DAB2P98082 770 aa9.33□□□□□ -0.92
MARK3-220ENST00000560417 TMC4Q7Z404 712 aa9.33□□□□□ -0.92
MARK3-220ENST00000560417 ABI2Q9NYB9 513 aaPredicted RBP9.33□□□□□ -0.92
MARK3-220ENST00000560417 PPFIA3O75145 1194 aa9.32□□□□□ -0.92
MARK3-220ENST00000560417 RECKO95980 971 aa9.32□□□□□ -0.92
MARK3-220ENST00000560417 CCINQ13939 588 aa9.32□□□□□ -0.92
MARK3-220ENST00000560417 USPL1Q5W0Q7 1092 aa9.32□□□□□ -0.92
MARK3-220ENST00000560417 Q6ZNB5 142 aa9.32□□□□□ -0.92
MARK3-220ENST00000560417 ABHD17AQ96GS6 310 aa9.32□□□□□ -0.92
MARK3-220ENST00000560417 MARK1Q9P0L2 795 aa9.32□□□□□ -0.92
MARK3-220ENST00000560417 CNTN3Q9P232 1028 aa9.32□□□□□ -0.92
MARK3-220ENST00000560417 ATXN7L1Q9ULK2 861 aaPredicted RBP9.32□□□□□ -0.92
MARK3-220ENST00000560417 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
MARK3-220ENST00000560417 GRIN2CQ14957 1233 aa9.31□□□□□ -0.92
MARK3-220ENST00000560417 FAM182BQ5T319 152 aa9.31□□□□□ -0.92
MARK3-220ENST00000560417 C1orf127Q8N9H9 656 aa9.31□□□□□ -0.92
MARK3-220ENST00000560417 NANOS1Q8WY41 292 aaKnown RBP9.31□□□□□ -0.92
MARK3-220ENST00000560417 EFCC1Q9HA90 598 aa9.31□□□□□ -0.92
MARK3-220ENST00000560417 PHACTR2O75167 634 aa9.3□□□□□ -0.92
MARK3-220ENST00000560417 SASH3O75995 380 aa9.3□□□□□ -0.92
MARK3-220ENST00000560417 TARSP26639 723 aaKnown RBP9.3□□□□□ -0.92
MARK3-220ENST00000560417 LDLRAD1Q5T700 205 aa9.3□□□□□ -0.92
MARK3-220ENST00000560417 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
MARK3-220ENST00000560417 ZFATQ9P243 1243 aa9.3□□□□□ -0.92
MARK3-220ENST00000560417 POTECB2RU33 542 aa9.29□□□□□ -0.92
MARK3-220ENST00000560417 GNA15P30679 374 aa9.29□□□□□ -0.92
MARK3-220ENST00000560417 VEGFBP49765 207 aa9.29□□□□□ -0.92
MARK3-220ENST00000560417 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
MARK3-220ENST00000560417 CCDC74AQ96AQ1 378 aa9.29□□□□□ -0.92
MARK3-220ENST00000560417 FAM161BQ96MY7 647 aa9.29□□□□□ -0.92
MARK3-220ENST00000560417 SLC30A3Q99726 388 aa9.29□□□□□ -0.92
MARK3-220ENST00000560417 EREGO14944 169 aa9.28□□□□□ -0.92
MARK3-220ENST00000560417 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
MARK3-220ENST00000560417 PMEPA1Q969W9 287 aa9.28□□□□□ -0.92
MARK3-220ENST00000560417 FRMD6Q96NE9 622 aa9.28□□□□□ -0.92
MARK3-220ENST00000560417 MMP20O60882 483 aa9.27□□□□□ -0.93
MARK3-220ENST00000560417 CD33P20138 364 aa9.27□□□□□ -0.93
MARK3-220ENST00000560417 FGFR3P22607 806 aa9.27□□□□□ -0.93
MARK3-220ENST00000560417 GALNT12Q8IXK2 581 aa9.27□□□□□ -0.93
MARK3-220ENST00000560417 OR13H1Q8NG92 308 aa9.27□□□□□ -0.93
MARK3-220ENST00000560417 BCL11AQ9H165 835 aa9.27□□□□□ -0.93
MARK3-220ENST00000560417 SORBS3O60504 671 aa9.26□□□□□ -0.93
MARK3-220ENST00000560417 MAP3K6O95382 1288 aa9.26□□□□□ -0.93
MARK3-220ENST00000560417 RARAP10276 462 aa9.26□□□□□ -0.93
MARK3-220ENST00000560417 PSMD2Q13200 908 aa9.26□□□□□ -0.93
MARK3-220ENST00000560417 TTC39BQ5VTQ0 682 aaPredicted RBP9.26□□□□□ -0.93
MARK3-220ENST00000560417 KRT25Q7Z3Z0 450 aa9.26□□□□□ -0.93
MARK3-220ENST00000560417 EPS8L3Q8TE67 593 aaKnown RBP9.26□□□□□ -0.93
MARK3-220ENST00000560417 BACH2Q9BYV9 841 aa9.26□□□□□ -0.93
MARK3-220ENST00000560417 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
MARK3-220ENST00000560417 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.26□□□□□ -0.93
MARK3-220ENST00000560417 AK5Q9Y6K8 562 aa9.26□□□□□ -0.93
MARK3-220ENST00000560417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.26□□□□□ -0.93
MARK3-220ENST00000560417 CYP2E1P05181 493 aaPredicted RBP9.25□□□□□ -0.93
MARK3-220ENST00000560417 HOXD8P13378 290 aaPredicted RBP9.25□□□□□ -0.93
MARK3-220ENST00000560417 NFKB1P19838 968 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 CES1P23141 567 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 IRS1P35568 1242 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 SOX18P35713 384 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 CTBSQ01459 385 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.25□□□□□ -0.93
MARK3-220ENST00000560417 PI16Q6UXB8 463 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 VWA5B2Q8N398 1253 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 NPHS2Q9NP85 383 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 SALL4Q9UJQ4 1053 aa9.25□□□□□ -0.93
MARK3-220ENST00000560417 GPR25O00155 361 aa9.24□□□□□ -0.93
MARK3-220ENST00000560417 POLR3DP05423 398 aaPredicted RBP9.24□□□□□ -0.93
MARK3-220ENST00000560417 SV2AQ7L0J3 742 aa9.24□□□□□ -0.93
MARK3-220ENST00000560417 TLR7Q9NYK1 1049 aaKnown RBP9.24□□□□□ -0.93
MARK3-220ENST00000560417 SPG7Q9UQ90 795 aa9.24□□□□□ -0.93
MARK3-220ENST00000560417 CDC14CA4D256 554 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 GIPC1O14908 333 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 KIF4AO95239 1232 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 TCF3P15923 654 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 ITGAEP38570 1179 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 TSNAXIP1Q2TAA8 658 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 FOXR1Q6PIV2 292 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 BHMTQ93088 406 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 TRERF1Q96PN7 1200 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 PNMA5Q96PV4 448 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 OSBPL7Q9BZF2 842 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 MRS2Q9HD23 443 aa9.23□□□□□ -0.93
MARK3-220ENST00000560417 C2CD2LO14523 706 aa9.22□□□□□ -0.93
MARK3-220ENST00000560417 CTSHP09668 335 aa9.22□□□□□ -0.93
MARK3-220ENST00000560417 PEAR1Q5VY43 1037 aaPredicted RBP9.22□□□□□ -0.93
MARK3-220ENST00000560417 RAB44Q7Z6P3 723 aaPredicted RBP9.22□□□□□ -0.93
MARK3-220ENST00000560417 NLRP2Q9NX02 1062 aa9.22□□□□□ -0.93
MARK3-220ENST00000560417 KANSL3Q9P2N6 904 aa9.22□□□□□ -0.93
MARK3-220ENST00000560417 COL13A1Q5TAT6 717 aaPredicted RBP9.21□□□□□ -0.94
MARK3-220ENST00000560417 KIAA0319Q5VV43 1072 aa9.21□□□□□ -0.94
MARK3-220ENST00000560417 DHX32Q7L7V1 743 aaKnown RBP9.21□□□□□ -0.94
MARK3-220ENST00000560417 NPAS3Q8IXF0 933 aa9.21□□□□□ -0.94
MARK3-220ENST00000560417 C12orf49Q9H741 205 aa9.21□□□□□ -0.94
MARK3-220ENST00000560417 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
MARK3-220ENST00000560417 PHF20L1A8MW92 1017 aa9.2□□□□□ -0.94
MARK3-220ENST00000560417 PSAPP07602 524 aa9.2□□□□□ -0.94
MARK3-220ENST00000560417 EDN3P14138 238 aa9.2□□□□□ -0.94
MARK3-220ENST00000560417 ZNF468Q5VIY5 522 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms