RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, humanhuman

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-208ENST00000560328 LMTK3Q96Q04 1460 aa10.84□□□□□ -0.67
NEO1-208ENST00000560328 CNNM3Q8NE01 707 aa10.84□□□□□ -0.67
NEO1-208ENST00000560328 HELBQ8NG08 1087 aaPredicted RBP10.84□□□□□ -0.67
NEO1-208ENST00000560328 DDX17Q92841 729 aaKnown RBP10.84□□□□□ -0.67
NEO1-208ENST00000560328 DDX19AQ9NUU7 478 aaKnown RBP10.84□□□□□ -0.67
NEO1-208ENST00000560328 EIF5P55010 431 aaKnown RBP10.84□□□□□ -0.67
NEO1-208ENST00000560328 VAT1LQ9HCJ6 419 aa10.84□□□□□ -0.67
NEO1-208ENST00000560328 CCDC112Q8NEF3 446 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 KRT23Q9C075 422 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 ZSCAN22P10073 491 aaPredicted RBP10.83□□□□□ -0.68
NEO1-208ENST00000560328 WTAPQ15007 396 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 NYXQ9GZU5 481 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 HOXB7P09629 217 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 TPTE2Q6XPS3 522 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 SPATA31E1Q6ZUB1 1445 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 Q6ZUG5 572 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 ERCC4Q92889 916 aaPredicted RBP10.83□□□□□ -0.68
NEO1-208ENST00000560328 RAB34Q9BZG1 259 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 RTCBQ9Y3I0 505 aaKnown RBP10.83□□□□□ -0.68
NEO1-208ENST00000560328 CFAP74Q9C0B2 1584 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 NAA16Q6N069 864 aaPredicted RBP10.83□□□□□ -0.68
NEO1-208ENST00000560328 SNX21Q969T3 373 aa10.83□□□□□ -0.68
NEO1-208ENST00000560328 RNF113AO15541 343 aaKnown RBP10.82□□□□□ -0.68
NEO1-208ENST00000560328 CDR1P51861 262 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 PLBD2Q8NHP8 589 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 SLC52A2Q9HAB3 445 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 KDM6BO15054 1643 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 ZBTB43O43298 467 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 HLA-DOAP06340 250 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 TNIP1Q15025 636 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 TMEM266Q2M3C6 531 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 ZSCAN16Q9H4T2 348 aaPredicted RBP10.82□□□□□ -0.68
NEO1-208ENST00000560328 CHMLP26374 656 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 UBE2HP62256 183 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 TXLNBQ8N3L3 684 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 ZGPATQ8N5A5 531 aaKnown RBP10.82□□□□□ -0.68
NEO1-208ENST00000560328 CUL5Q93034 780 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 METTL22Q9BUU2 404 aaPredicted RBP10.82□□□□□ -0.68
NEO1-208ENST00000560328 CNNM2Q9H8M5 875 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 USP19O94966 1318 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 CCDC12Q8WUD4 166 aaPredicted RBP10.82□□□□□ -0.68
NEO1-208ENST00000560328 ESR2Q92731 530 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 STX8Q9UNK0 236 aa10.82□□□□□ -0.68
NEO1-208ENST00000560328 BLMP54132 1417 aaPredicted RBP10.82□□□□□ -0.68
NEO1-208ENST00000560328 RBM27Q9P2N5 1060 aaKnown RBP10.81□□□□□ -0.68
NEO1-208ENST00000560328 FAM89AQ96GI7 184 aa10.81□□□□□ -0.68
NEO1-208ENST00000560328 PANK2Q9BZ23 570 aa10.81□□□□□ -0.68
NEO1-208ENST00000560328 SEC24BO95487 1268 aa10.81□□□□□ -0.68
NEO1-208ENST00000560328 ZSCAN30Q86W11 494 aa10.81□□□□□ -0.68
NEO1-208ENST00000560328 EPB41L2O43491 1005 aaKnown RBP10.81□□□□□ -0.68
NEO1-208ENST00000560328 MTERF4Q7Z6M4 381 aaKnown RBP10.81□□□□□ -0.68
NEO1-208ENST00000560328 TMTC2Q8N394 836 aa10.81□□□□□ -0.68
NEO1-208ENST00000560328 MYO6Q9UM54 1294 aa10.81□□□□□ -0.68
NEO1-208ENST00000560328 ARHGEF10O15013 1369 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 BIN1O00499 593 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 SFPQP23246 707 aaKnown RBP eCLIP10.8□□□□□ -0.68
NEO1-208ENST00000560328 KLHL40Q2TBA0 621 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 CABP5Q9NP86 173 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 TSPY3P0CV98 308 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 TSPY8P0CW00 308 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 IFIT1BQ5T764 474 aaKnown RBP10.8□□□□□ -0.68
NEO1-208ENST00000560328 SEPT11Q9NVA2 429 aaKnown RBP10.8□□□□□ -0.68
NEO1-208ENST00000560328 USP25Q9UHP3 1055 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 TTC37Q6PGP7 1564 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 INSRP06213 1382 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 F8W031 263 aaPredicted RBP10.8□□□□□ -0.68
NEO1-208ENST00000560328 CCDC181Q5TID7 509 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 CREB3L3Q68CJ9 461 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 OTUD7AQ8TE49 926 aaPredicted RBP10.8□□□□□ -0.68
NEO1-208ENST00000560328 SLAIN2Q9P270 581 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 MAGEB6P1A0A0J9YX57 407 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 ALG1Q9BT22 464 aa10.8□□□□□ -0.68
NEO1-208ENST00000560328 PRC1O43663 620 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 MATR3P43243 847 aaKnown RBP eCLIP10.79□□□□□ -0.68
NEO1-208ENST00000560328 ZNF804AQ7Z570 1209 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 CDCA7Q9BWT1 371 aaPredicted RBP10.79□□□□□ -0.68
NEO1-208ENST00000560328 KDM5AP29375 1690 aaKnown RBP10.79□□□□□ -0.68
NEO1-208ENST00000560328 RBM25P49756 843 aaKnown RBP10.79□□□□□ -0.68
NEO1-208ENST00000560328 ZNF397Q8NF99 534 aaPredicted RBP10.79□□□□□ -0.68
NEO1-208ENST00000560328 USP26Q9BXU7 913 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 SBNO2Q9Y2G9 1366 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 A1BGP04217 495 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 RDXP35241 583 aaKnown RBP10.79□□□□□ -0.68
NEO1-208ENST00000560328 RTN1Q16799 776 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 MAGEB6Q8N7X4 407 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 MAP7D2Q96T17 732 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 TCP11L1Q9NUJ3 509 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 CLIP2Q9UDT6 1046 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 AK2P54819 239 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 RBM10P98175 930 aaKnown RBP10.79□□□□□ -0.68
NEO1-208ENST00000560328 FEZ1Q99689 392 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 CNPY2Q9Y2B0 182 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 METP08581 1390 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 TIMM10P62072 90 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 VSIG10Q8N0Z9 540 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 KLHDC4Q8TBB5 520 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 TSG101Q99816 390 aa10.79□□□□□ -0.68
NEO1-208ENST00000560328 PPP1R12BO60237 982 aaPredicted RBP10.78□□□□□ -0.68
NEO1-208ENST00000560328 EIF4A1P60842 406 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms