RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
IRF9-208ENST00000560311 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
IRF9-208ENST00000560311 ADH1BP00325 375 aa8.67□□□□□ -1.02
IRF9-208ENST00000560311 DDX10Q13206 875 aaKnown RBP8.67□□□□□ -1.02
IRF9-208ENST00000560311 PHACTR3Q96KR7 559 aa8.67□□□□□ -1.02
IRF9-208ENST00000560311 UTRNP46939 3433 aa8.66□□□□□ -1.02
IRF9-208ENST00000560311 MYBBP1AQ9BQG0 1328 aaKnown RBP8.66□□□□□ -1.02
IRF9-208ENST00000560311 ACTN4O43707 911 aaKnown RBP8.66□□□□□ -1.02
IRF9-208ENST00000560311 NFX1Q12986 1120 aaKnown RBP8.66□□□□□ -1.02
IRF9-208ENST00000560311 SLC39A6Q13433 755 aa8.66□□□□□ -1.02
IRF9-208ENST00000560311 RALBP1Q15311 655 aa8.66□□□□□ -1.02
IRF9-208ENST00000560311 SYT17Q9BSW7 474 aa8.66□□□□□ -1.02
IRF9-208ENST00000560311 RTCBQ9Y3I0 505 aaKnown RBP8.66□□□□□ -1.02
IRF9-208ENST00000560311 ARIH1Q9Y4X5 557 aaPredicted RBP8.66□□□□□ -1.02
IRF9-208ENST00000560311 KAT6BQ8WYB5 2073 aa8.65□□□□□ -1.02
IRF9-208ENST00000560311 FCHSD2O94868 740 aa8.65□□□□□ -1.02
IRF9-208ENST00000560311 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.02
IRF9-208ENST00000560311 CRKLP46109 303 aaKnown RBP8.65□□□□□ -1.02
IRF9-208ENST00000560311 TEFQ10587 303 aa8.65□□□□□ -1.02
IRF9-208ENST00000560311 KMT5BQ4FZB7 885 aa8.65□□□□□ -1.02
IRF9-208ENST00000560311 RC3H1Q5TC82 1133 aaKnown RBP8.65□□□□□ -1.02
IRF9-208ENST00000560311 TTC5Q8N0Z6 440 aa8.65□□□□□ -1.02
IRF9-208ENST00000560311 NLGN2Q8NFZ4 835 aa8.65□□□□□ -1.02
IRF9-208ENST00000560311 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
IRF9-208ENST00000560311 SCN7AQ01118 1682 aa8.65□□□□□ -1.03
IRF9-208ENST00000560311 C10orf71Q711Q0 1435 aa8.64□□□□□ -1.03
IRF9-208ENST00000560311 COL15A1P39059 1388 aa8.64□□□□□ -1.03
IRF9-208ENST00000560311 CFHP08603 1231 aa8.64□□□□□ -1.03
IRF9-208ENST00000560311 DNAJC10Q8IXB1 793 aa8.64□□□□□ -1.03
IRF9-208ENST00000560311 CRIPAKQ8N1N5 446 aa8.64□□□□□ -1.03
IRF9-208ENST00000560311 IL17REQ8NFR9 667 aa8.64□□□□□ -1.03
IRF9-208ENST00000560311 HEG1Q9ULI3 1381 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 SOS1Q07889 1333 aaPredicted RBP8.63□□□□□ -1.03
IRF9-208ENST00000560311 USP42Q9H9J4 1324 aaKnown RBP8.63□□□□□ -1.03
IRF9-208ENST00000560311 MAPK8IP3Q9UPT6 1336 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 RPS6KA4O75676 772 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 DNAJB2P25686 324 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 TRAPPC3LQ5T215 181 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 MCM10Q7L590 875 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 RTF1Q92541 710 aaKnown RBP8.63□□□□□ -1.03
IRF9-208ENST00000560311 CCDC87Q9NVE4 849 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 ZBTB1Q9Y2K1 713 aa8.63□□□□□ -1.03
IRF9-208ENST00000560311 GOLGB1Q14789 3259 aaKnown RBP8.63□□□□□ -1.03
IRF9-208ENST00000560311 AXIN1O15169 862 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 WIPF1O43516 503 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 NEFMP07197 916 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 MMP10P09238 476 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 CYP19A1P11511 503 aaPredicted RBP8.62□□□□□ -1.03
IRF9-208ENST00000560311 RFC4P35249 363 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 INTS5Q6P9B9 1019 aaKnown RBP8.62□□□□□ -1.03
IRF9-208ENST00000560311 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 ARHGEF1Q92888 912 aaKnown RBP8.62□□□□□ -1.03
IRF9-208ENST00000560311 ZNF496Q96IT1 587 aaPredicted RBP8.62□□□□□ -1.03
IRF9-208ENST00000560311 PLEKHF1Q96S99 279 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 TMEM134Q9H6X4 195 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 SRP68Q9UHB9 627 aaKnown RBP8.62□□□□□ -1.03
IRF9-208ENST00000560311 LAMB4A4D0S4 1761 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 KIAA1551Q9HCM1 1747 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 PXDNLA1KZ92 1463 aa8.62□□□□□ -1.03
IRF9-208ENST00000560311 KDM3BQ7LBC6 1761 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 BTBD11A6QL63 1104 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 NR1I2O75469 434 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 AVPP01185 164 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 GYS1P13807 737 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 INSM1Q01101 510 aaPredicted RBP8.61□□□□□ -1.03
IRF9-208ENST00000560311 DCTN1Q14203 1278 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 NFE2L2Q16236 605 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 FMNL2Q96PY5 1086 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 CD2APQ9Y5K6 639 aa8.61□□□□□ -1.03
IRF9-208ENST00000560311 MYH14Q7Z406 1995 aaKnown RBP8.61□□□□□ -1.03
IRF9-208ENST00000560311 KCNQ3O43525 872 aa8.6□□□□□ -1.03
IRF9-208ENST00000560311 HTATSF1O43719 755 aaKnown RBP8.6□□□□□ -1.03
IRF9-208ENST00000560311 PRKRIP1Q9H875 184 aaPredicted RBP8.6□□□□□ -1.03
IRF9-208ENST00000560311 TOR4AQ9NXH8 423 aa8.6□□□□□ -1.03
IRF9-208ENST00000560311 BCORQ6W2J9 1755 aa8.6□□□□□ -1.03
IRF9-208ENST00000560311 KIF13BQ9NQT8 1826 aa8.59□□□□□ -1.03
IRF9-208ENST00000560311 STARD3NLO95772 234 aa8.59□□□□□ -1.03
IRF9-208ENST00000560311 SLC10A3P09131 477 aa8.59□□□□□ -1.03
IRF9-208ENST00000560311 YY1P25490 414 aa8.59□□□□□ -1.03
IRF9-208ENST00000560311 GPR162Q16538 588 aa8.59□□□□□ -1.03
IRF9-208ENST00000560311 NLGN1Q8N2Q7 840 aa8.59□□□□□ -1.03
IRF9-208ENST00000560311 PNNQ9H307 717 aaKnown RBP8.59□□□□□ -1.03
IRF9-208ENST00000560311 DLG5Q8TDM6 1919 aa8.58□□□□□ -1.04
IRF9-208ENST00000560311 YBX3P16989 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
IRF9-208ENST00000560311 CANXP27824 592 aaKnown RBP8.58□□□□□ -1.04
IRF9-208ENST00000560311 DDR1Q08345 913 aa8.58□□□□□ -1.04
IRF9-208ENST00000560311 WDR43Q15061 677 aaKnown RBP eCLIP8.58□□□□□ -1.04
IRF9-208ENST00000560311 FAM161AQ3B820 660 aa8.58□□□□□ -1.04
IRF9-208ENST00000560311 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
IRF9-208ENST00000560311 CCDC146Q8IYE0 955 aa8.58□□□□□ -1.04
IRF9-208ENST00000560311 CYP4X1Q8N118 509 aa8.58□□□□□ -1.04
IRF9-208ENST00000560311 THUMPD2Q9BTF0 503 aaKnown RBP8.58□□□□□ -1.04
IRF9-208ENST00000560311 PARP3Q9Y6F1 533 aa8.58□□□□□ -1.04
IRF9-208ENST00000560311 PRAMEF22A3QJZ6 481 aa8.57□□□□□ -1.04
IRF9-208ENST00000560311 RCCD1A6NED2 376 aa8.57□□□□□ -1.04
IRF9-208ENST00000560311 SCUBE3Q8IX30 993 aa8.57□□□□□ -1.04
IRF9-208ENST00000560311 RBM46Q8TBY0 533 aaKnown RBP8.57□□□□□ -1.04
IRF9-208ENST00000560311 TEX13AQ9BXU3 409 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms