RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
SMAD3-211ENST00000559460 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
SMAD3-211ENST00000559460 KCNQ3O43525 872 aa13□□□□□ -0.33
SMAD3-211ENST00000559460 FKBP1BP68106 108 aa13□□□□□ -0.33
SMAD3-211ENST00000559460 SREBF2Q12772 1141 aa13□□□□□ -0.33
SMAD3-211ENST00000559460 KIF4BQ2VIQ3 1234 aa13□□□□□ -0.33
SMAD3-211ENST00000559460 NGEFQ8N5V2 710 aa13□□□□□ -0.33
SMAD3-211ENST00000559460 CDCA5Q96FF9 252 aa13□□□□□ -0.33
SMAD3-211ENST00000559460 GGA3Q9NZ52 723 aa13□□□□□ -0.33
SMAD3-211ENST00000559460 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
SMAD3-211ENST00000559460 GPTP24298 496 aa12.99□□□□□ -0.33
SMAD3-211ENST00000559460 RPS12P25398 132 aaKnown RBP12.99□□□□□ -0.33
SMAD3-211ENST00000559460 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
SMAD3-211ENST00000559460 SLC51AQ86UW1 340 aa12.99□□□□□ -0.33
SMAD3-211ENST00000559460 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
SMAD3-211ENST00000559460 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
SMAD3-211ENST00000559460 TTLL12Q14166 644 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-211ENST00000559460 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
SMAD3-211ENST00000559460 TRIM17Q9Y577 477 aa12.98□□□□□ -0.33
SMAD3-211ENST00000559460 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-211ENST00000559460 ABCC4O15439 1325 aa12.97□□□□□ -0.33
SMAD3-211ENST00000559460 NBPF26B4DH59 902 aa12.97□□□□□ -0.33
SMAD3-211ENST00000559460 PSMD14O00487 310 aa12.97□□□□□ -0.33
SMAD3-211ENST00000559460 BBOX1O75936 387 aa12.97□□□□□ -0.33
SMAD3-211ENST00000559460 NBPF10Q6P3W6 841 aaKnown RBP12.97□□□□□ -0.33
SMAD3-211ENST00000559460 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
SMAD3-211ENST00000559460 TMEM106CQ9BVX2 250 aa12.97□□□□□ -0.33
SMAD3-211ENST00000559460 MAP3K15Q6ZN16 1313 aa12.96□□□□□ -0.33
SMAD3-211ENST00000559460 YDJCA8MPS7 323 aa12.96□□□□□ -0.33
SMAD3-211ENST00000559460 WASHC4Q2M389 1173 aa12.96□□□□□ -0.33
SMAD3-211ENST00000559460 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
SMAD3-211ENST00000559460 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
SMAD3-211ENST00000559460 PAPPA2Q9BXP8 1791 aa12.95□□□□□ -0.34
SMAD3-211ENST00000559460 ALDH1A1P00352 501 aa12.95□□□□□ -0.34
SMAD3-211ENST00000559460 EGFRP00533 1210 aa12.95□□□□□ -0.34
SMAD3-211ENST00000559460 NF2P35240 595 aa12.95□□□□□ -0.34
SMAD3-211ENST00000559460 TCIRG1Q13488 830 aa12.95□□□□□ -0.34
SMAD3-211ENST00000559460 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
SMAD3-211ENST00000559460 ZBTB3Q9H5J0 574 aa12.95□□□□□ -0.34
SMAD3-211ENST00000559460 UBN2Q6ZU65 1347 aa12.94□□□□□ -0.34
SMAD3-211ENST00000559460 G3V3G9 751 aa12.94□□□□□ -0.34
SMAD3-211ENST00000559460 NTSR2O95665 410 aa12.94□□□□□ -0.34
SMAD3-211ENST00000559460 TM4SF4P48230 202 aa12.94□□□□□ -0.34
SMAD3-211ENST00000559460 MKRN3Q13064 507 aaKnown RBP12.94□□□□□ -0.34
SMAD3-211ENST00000559460 PARP10Q53GL7 1025 aa12.94□□□□□ -0.34
SMAD3-211ENST00000559460 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
SMAD3-211ENST00000559460 ANGEL2Q5VTE6 544 aaKnown RBP12.94□□□□□ -0.34
SMAD3-211ENST00000559460 DBNDD1Q9H9R9 158 aa12.94□□□□□ -0.34
SMAD3-211ENST00000559460 EN2P19622 333 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-211ENST00000559460 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
SMAD3-211ENST00000559460 TMC4Q7Z404 712 aa12.93□□□□□ -0.34
SMAD3-211ENST00000559460 UBE2Q2LH0YL09 131 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 ECE2O60344 883 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 GRAPQ13588 217 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 OTOP1Q7RTM1 612 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-211ENST00000559460 ERO1AQ96HE7 468 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 EYA3Q99504 573 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 UTP14AQ9BVJ6 771 aaKnown RBP12.92□□□□□ -0.34
SMAD3-211ENST00000559460 CFHR5Q9BXR6 569 aa12.92□□□□□ -0.34
SMAD3-211ENST00000559460 RRP7AQ9Y3A4 280 aaKnown RBP12.92□□□□□ -0.34
SMAD3-211ENST00000559460 MYL6BP14649 208 aa12.91□□□□□ -0.34
SMAD3-211ENST00000559460 H0YGN5 161 aa12.9□□□□□ -0.34
SMAD3-211ENST00000559460 SCARF1Q14162 830 aa12.9□□□□□ -0.34
SMAD3-211ENST00000559460 SLC4A8Q2Y0W8 1093 aa12.9□□□□□ -0.34
SMAD3-211ENST00000559460 GIGYF2Q6Y7W6 1299 aaKnown RBP12.9□□□□□ -0.34
SMAD3-211ENST00000559460 TTLL7Q6ZT98 887 aa12.9□□□□□ -0.34
SMAD3-211ENST00000559460 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
SMAD3-211ENST00000559460 ZNF34Q8IZ26 560 aa12.9□□□□□ -0.34
SMAD3-211ENST00000559460 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
SMAD3-211ENST00000559460 ASTN2O75129 1339 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-211ENST00000559460 PITPNM2Q9BZ72 1349 aa12.89□□□□□ -0.35
SMAD3-211ENST00000559460 RBBP6Q7Z6E9 1792 aaKnown RBP12.89□□□□□ -0.35
SMAD3-211ENST00000559460 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-211ENST00000559460 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
SMAD3-211ENST00000559460 PTPN22Q9Y2R2 807 aa12.89□□□□□ -0.35
SMAD3-211ENST00000559460 NUP98P52948 1817 aa12.89□□□□□ -0.35
SMAD3-211ENST00000559460 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
SMAD3-211ENST00000559460 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
SMAD3-211ENST00000559460 MCM10Q7L590 875 aa12.88□□□□□ -0.35
SMAD3-211ENST00000559460 ARMC9Q7Z3E5 817 aa12.88□□□□□ -0.35
SMAD3-211ENST00000559460 ARMC5Q96C12 935 aa12.88□□□□□ -0.35
SMAD3-211ENST00000559460 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
SMAD3-211ENST00000559460 POLR2AP24928 1970 aaKnown RBP12.88□□□□□ -0.35
SMAD3-211ENST00000559460 MANSC4A6NHS7 340 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-211ENST00000559460 PRKAR2BP31323 418 aa12.87□□□□□ -0.35
SMAD3-211ENST00000559460 INHBEP58166 350 aa12.87□□□□□ -0.35
SMAD3-211ENST00000559460 ARHGEF6Q15052 776 aa12.87□□□□□ -0.35
SMAD3-211ENST00000559460 SLC10A5Q5PT55 438 aa12.87□□□□□ -0.35
SMAD3-211ENST00000559460 OTUD5Q96G74 571 aa12.87□□□□□ -0.35
SMAD3-211ENST00000559460 ZC3H12CQ9C0D7 883 aaKnown RBP12.87□□□□□ -0.35
SMAD3-211ENST00000559460 DDX60Q8IY21 1712 aaKnown RBP12.87□□□□□ -0.35
SMAD3-211ENST00000559460 RTL9Q8NET4 1388 aa12.86□□□□□ -0.35
SMAD3-211ENST00000559460 VIL1P09327 827 aaKnown RBP12.86□□□□□ -0.35
SMAD3-211ENST00000559460 HCLS1P14317 486 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-211ENST00000559460 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
SMAD3-211ENST00000559460 OTUD7BQ6GQQ9 843 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms