RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 EIF4A2Q14240 407 aaKnown RBP8.39□□□□□ -1.07
MARK3-216ENST00000558953 TPRNQ4KMQ1 711 aa8.39□□□□□ -1.07
MARK3-216ENST00000558953 CHD4Q14839 1912 aa8.39□□□□□ -1.07
MARK3-216ENST00000558953 ZEB1P37275 1124 aaPredicted RBP8.38□□□□□ -1.07
MARK3-216ENST00000558953 MORC1Q86VD1 984 aa8.38□□□□□ -1.07
MARK3-216ENST00000558953 IFNL2Q8IZJ0 200 aa8.38□□□□□ -1.07
MARK3-216ENST00000558953 FLAD1Q8NFF5 587 aa8.38□□□□□ -1.07
MARK3-216ENST00000558953 ARHGEF1Q92888 912 aaKnown RBP8.38□□□□□ -1.07
MARK3-216ENST00000558953 SLC27A5Q9Y2P5 690 aa8.38□□□□□ -1.07
MARK3-216ENST00000558953 KNSTRNQ9Y448 316 aa8.38□□□□□ -1.07
MARK3-216ENST00000558953 SALL2Q9Y467 1007 aaPredicted RBP8.38□□□□□ -1.07
MARK3-216ENST00000558953 IGSF1Q8N6C5 1336 aa8.37□□□□□ -1.07
MARK3-216ENST00000558953 PHKG2P15735 406 aa8.37□□□□□ -1.07
MARK3-216ENST00000558953 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
MARK3-216ENST00000558953 MSS51Q4VC12 460 aa8.37□□□□□ -1.07
MARK3-216ENST00000558953 COL23A1Q86Y22 540 aaPredicted RBP8.37□□□□□ -1.07
MARK3-216ENST00000558953 PIGBQ92521 554 aa8.37□□□□□ -1.07
MARK3-216ENST00000558953 TMOD3Q9NYL9 352 aa8.37□□□□□ -1.07
MARK3-216ENST00000558953 HSP90AB1P08238 724 aaKnown RBP8.36□□□□□ -1.07
MARK3-216ENST00000558953 GSK3AP49840 483 aa8.36□□□□□ -1.07
MARK3-216ENST00000558953 FUT2Q10981 343 aa8.36□□□□□ -1.07
MARK3-216ENST00000558953 PLEKHO1Q53GL0 409 aaPredicted RBP8.36□□□□□ -1.07
MARK3-216ENST00000558953 BRICD5Q6PL45 260 aa8.36□□□□□ -1.07
MARK3-216ENST00000558953 C4BP0C0L5 1744 aa8.36□□□□□ -1.07
MARK3-216ENST00000558953 UBR3Q6ZT12 1888 aa8.35□□□□□ -1.07
MARK3-216ENST00000558953 SEMA3EO15041 775 aa8.35□□□□□ -1.07
MARK3-216ENST00000558953 OATP04181 439 aa8.35□□□□□ -1.07
MARK3-216ENST00000558953 FECHP22830 423 aa8.35□□□□□ -1.07
MARK3-216ENST00000558953 TRIM46Q7Z4K8 759 aa8.35□□□□□ -1.07
MARK3-216ENST00000558953 PXYLP1Q8TE99 480 aa8.35□□□□□ -1.07
MARK3-216ENST00000558953 AK7Q96M32 723 aa8.35□□□□□ -1.07
MARK3-216ENST00000558953 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
MARK3-216ENST00000558953 ERVV-2B6SEH9 535 aa8.34□□□□□ -1.07
MARK3-216ENST00000558953 BMP1P13497 986 aa8.34□□□□□ -1.07
MARK3-216ENST00000558953 SIK1P57059 783 aa8.34□□□□□ -1.07
MARK3-216ENST00000558953 GPR162Q16538 588 aa8.34□□□□□ -1.07
MARK3-216ENST00000558953 AMOTQ4VCS5 1084 aa8.34□□□□□ -1.07
MARK3-216ENST00000558953 TMEM151AQ8N4L1 468 aa8.34□□□□□ -1.07
MARK3-216ENST00000558953 DCAF5Q96JK2 942 aa8.34□□□□□ -1.07
MARK3-216ENST00000558953 KIF7Q2M1P5 1343 aa8.33□□□□□ -1.08
MARK3-216ENST00000558953 SSFA2P28290 1259 aa8.33□□□□□ -1.08
MARK3-216ENST00000558953 MLLT3P42568 568 aaPredicted RBP8.33□□□□□ -1.08
MARK3-216ENST00000558953 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
MARK3-216ENST00000558953 MSL1Q68DK7 614 aa8.33□□□□□ -1.08
MARK3-216ENST00000558953 ZNF530Q6P9A1 599 aaPredicted RBP8.33□□□□□ -1.08
MARK3-216ENST00000558953 RDH13Q8NBN7 331 aa8.33□□□□□ -1.08
MARK3-216ENST00000558953 ATG3Q9NT62 314 aa8.33□□□□□ -1.08
MARK3-216ENST00000558953 ASAP1Q9ULH1 1129 aa8.33□□□□□ -1.08
MARK3-216ENST00000558953 ZNF831Q5JPB2 1677 aa8.33□□□□□ -1.08
MARK3-216ENST00000558953 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 CABP4P57796 275 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 ITPK1Q13572 414 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 C1orf141Q5JVX7 400 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 AEBP1Q8IUX7 1158 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 LINC00116Q8NCU8 138 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 NLGN2Q8NFZ4 835 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 CD2APQ9Y5K6 639 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 KDRP35968 1356 aa8.32□□□□□ -1.08
MARK3-216ENST00000558953 TESPA1A2RU30 521 aaPredicted RBP8.31□□□□□ -1.08
MARK3-216ENST00000558953 GNPATO15228 680 aa8.31□□□□□ -1.08
MARK3-216ENST00000558953 GRIN3BO60391 1043 aa8.31□□□□□ -1.08
MARK3-216ENST00000558953 IL13P35225 146 aa8.31□□□□□ -1.08
MARK3-216ENST00000558953 MTHFSP49914 203 aa8.31□□□□□ -1.08
MARK3-216ENST00000558953 SULT6B1Q6IMI4 303 aa8.31□□□□□ -1.08
MARK3-216ENST00000558953 SCN11AQ9UI33 1791 aa8.3□□□□□ -1.08
MARK3-216ENST00000558953 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
MARK3-216ENST00000558953 COL5A3P25940 1745 aaPredicted RBP8.3□□□□□ -1.08
MARK3-216ENST00000558953 CAPN5O15484 640 aaPredicted RBP8.3□□□□□ -1.08
MARK3-216ENST00000558953 PER1O15534 1290 aaPredicted RBP8.3□□□□□ -1.08
MARK3-216ENST00000558953 GDF11O95390 407 aa8.3□□□□□ -1.08
MARK3-216ENST00000558953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.3□□□□□ -1.08
MARK3-216ENST00000558953 AMIGO3Q86WK7 504 aa8.3□□□□□ -1.08
MARK3-216ENST00000558953 ZNF784Q8NCA9 323 aaPredicted RBP8.3□□□□□ -1.08
MARK3-216ENST00000558953 VIRMAQ69YN4 1812 aaKnown RBP8.29□□□□□ -1.08
MARK3-216ENST00000558953 MMP16P51512 607 aa8.29□□□□□ -1.08
MARK3-216ENST00000558953 WNT7BP56706 349 aa8.29□□□□□ -1.08
MARK3-216ENST00000558953 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
MARK3-216ENST00000558953 RNF19BQ6ZMZ0 732 aa8.29□□□□□ -1.08
MARK3-216ENST00000558953 SMIM5Q71RC9 77 aa8.29□□□□□ -1.08
MARK3-216ENST00000558953 NFATC2IPQ8NCF5 419 aa8.29□□□□□ -1.08
MARK3-216ENST00000558953 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
MARK3-216ENST00000558953 MYH14Q7Z406 1995 aaKnown RBP8.28□□□□□ -1.08
MARK3-216ENST00000558953 NPC1L1Q9UHC9 1359 aa8.28□□□□□ -1.08
MARK3-216ENST00000558953 DIAPH1O60610 1272 aaKnown RBP8.28□□□□□ -1.08
MARK3-216ENST00000558953 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
MARK3-216ENST00000558953 YBX3P16989 372 aaKnown RBP eCLIP8.28□□□□□ -1.08
MARK3-216ENST00000558953 SKOR1P84550 965 aa8.28□□□□□ -1.08
MARK3-216ENST00000558953 RASSF7Q02833 373 aa8.28□□□□□ -1.08
MARK3-216ENST00000558953 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
MARK3-216ENST00000558953 CC2D1BQ5T0F9 858 aaKnown RBP8.28□□□□□ -1.08
MARK3-216ENST00000558953 METTL3Q86U44 580 aaKnown RBP8.28□□□□□ -1.08
MARK3-216ENST00000558953 SLC4A9Q96Q91 983 aa8.28□□□□□ -1.08
MARK3-216ENST00000558953 CNTNAP4Q9C0A0 1308 aa8.28□□□□□ -1.08
MARK3-216ENST00000558953 PTCD1O75127 700 aaKnown RBP8.27□□□□□ -1.09
MARK3-216ENST00000558953 RPS6KA4O75676 772 aa8.27□□□□□ -1.09
MARK3-216ENST00000558953 FCHSD2O94868 740 aa8.27□□□□□ -1.09
MARK3-216ENST00000558953 HMOX1P09601 288 aa8.27□□□□□ -1.09
MARK3-216ENST00000558953 NLGN1Q8N2Q7 840 aa8.27□□□□□ -1.09
MARK3-216ENST00000558953 CICQ96RK0 1608 aaPredicted RBP8.27□□□□□ -1.09
MARK3-216ENST00000558953 MMP10P09238 476 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms