RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 SYCP2Q9BX26 1530 aa7.73□□□□□ -1.17
SPG21-208ENST00000558943 PREX2Q70Z35 1606 aa7.72□□□□□ -1.17
SPG21-208ENST00000558943 SHISA8B8ZZ34 492 aa7.72□□□□□ -1.17
SPG21-208ENST00000558943 LAMC2Q13753 1193 aa7.72□□□□□ -1.17
SPG21-208ENST00000558943 SAMD5Q5TGI4 173 aa7.72□□□□□ -1.17
SPG21-208ENST00000558943 ZCCHC2Q9C0B9 1178 aaKnown RBP7.72□□□□□ -1.17
SPG21-208ENST00000558943 IQSEC3Q9UPP2 1182 aaPredicted RBP7.72□□□□□ -1.17
SPG21-208ENST00000558943 COG6Q9Y2V7 657 aa7.72□□□□□ -1.17
SPG21-208ENST00000558943 LRRC9Q6ZRR7 1453 aa7.72□□□□□ -1.17
SPG21-208ENST00000558943 CDK12Q9NYV4 1490 aaPredicted RBP7.72□□□□□ -1.17
SPG21-208ENST00000558943 AFF2P51816 1311 aa7.72□□□□□ -1.17
SPG21-208ENST00000558943 CCNB3Q8WWL7 1395 aa7.71□□□□□ -1.17
SPG21-208ENST00000558943 SCAF11Q99590 1463 aaKnown RBP7.71□□□□□ -1.18
SPG21-208ENST00000558943 C2CD2LO14523 706 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 ATXN7O15265 892 aaPredicted RBP7.71□□□□□ -1.18
SPG21-208ENST00000558943 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
SPG21-208ENST00000558943 FAM157BP0CG42 384 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 EPXP11678 715 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 C14orf37Q86TY3 774 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 SLC26A8Q96RN1 970 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 SPOCK3Q9BQ16 436 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 ALG2Q9H553 416 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 PCDHGA11Q9Y5H2 935 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 GPATCH8Q9UKJ3 1502 aaKnown RBP7.71□□□□□ -1.18
SPG21-208ENST00000558943 STRCP1A6NGW2 1772 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 ATAD2Q6PL18 1390 aa7.71□□□□□ -1.18
SPG21-208ENST00000558943 EEA1Q15075 1411 aa7.7□□□□□ -1.18
SPG21-208ENST00000558943 ROBO1Q9Y6N7 1651 aa7.7□□□□□ -1.18
SPG21-208ENST00000558943 ADH6P28332 368 aa7.7□□□□□ -1.18
SPG21-208ENST00000558943 SNRPNP63162 240 aaKnown RBP7.7□□□□□ -1.18
SPG21-208ENST00000558943 C1orf229Q6ZS94 237 aaPredicted RBP7.7□□□□□ -1.18
SPG21-208ENST00000558943 AIDAQ96BJ3 306 aa7.7□□□□□ -1.18
SPG21-208ENST00000558943 NOP53Q9NZM5 478 aaKnown RBP7.7□□□□□ -1.18
SPG21-208ENST00000558943 GGA1Q9UJY5 639 aa7.7□□□□□ -1.18
SPG21-208ENST00000558943 ZNF644Q9H582 1327 aaPredicted RBP7.7□□□□□ -1.18
SPG21-208ENST00000558943 RTEL1-TNFRSF6BF6WH68 1400 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 FGD6Q6ZV73 1430 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 A0A1W2PNR3 127 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 GNB5O14775 395 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 RAD21O60216 631 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 SKIP12755 728 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 CTBSQ01459 385 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 TNP2Q05952 138 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 FLIIQ13045 1269 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 ARSJQ5FYB0 599 aaPredicted RBP7.69□□□□□ -1.18
SPG21-208ENST00000558943 TRIM50Q86XT4 487 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 C8orf37Q96NL8 207 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 RRAGCQ9HB90 399 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 LRP6O75581 1613 aa7.69□□□□□ -1.18
SPG21-208ENST00000558943 CCDC18Q5T9S5 1454 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 PROCP04070 461 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 TSPY4P0CV99 314 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 TSPY10P0CW01 314 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 ATF3P18847 181 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 AMPD1P23109 780 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 GTF2IP78347 998 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 CABP1Q9NZU7 370 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 SCHIP1Q9P0W5 487 aaPredicted RBP7.68□□□□□ -1.18
SPG21-208ENST00000558943 SERTAD1Q9UHV2 236 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 GJA3Q9Y6H8 435 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 ARHGAP35Q9NRY4 1499 aa7.68□□□□□ -1.18
SPG21-208ENST00000558943 INO80Q9ULG1 1556 aaPredicted RBP7.67□□□□□ -1.18
SPG21-208ENST00000558943 ITGB2P05107 769 aa7.67□□□□□ -1.18
SPG21-208ENST00000558943 MAPTP10636 758 aaKnown RBP7.67□□□□□ -1.18
SPG21-208ENST00000558943 HOXB4P17483 251 aaPredicted RBP7.67□□□□□ -1.18
SPG21-208ENST00000558943 LINC00114Q6XXX2 140 aa7.67□□□□□ -1.18
SPG21-208ENST00000558943 BTBD6Q96KE9 485 aa7.67□□□□□ -1.18
SPG21-208ENST00000558943 ZIC5Q96T25 663 aa7.67□□□□□ -1.18
SPG21-208ENST00000558943 PIK3CDO00329 1044 aa7.66□□□□□ -1.18
SPG21-208ENST00000558943 DGKGP49619 791 aa7.66□□□□□ -1.18
SPG21-208ENST00000558943 ATP1A2P50993 1020 aa7.66□□□□□ -1.18
SPG21-208ENST00000558943 TEAD4Q15561 434 aa7.66□□□□□ -1.18
SPG21-208ENST00000558943 PLEKHM2Q8IWE5 1019 aa7.66□□□□□ -1.18
SPG21-208ENST00000558943 ADGBQ8N7X0 1667 aa7.66□□□□□ -1.18
SPG21-208ENST00000558943 PHLPP1O60346 1717 aa7.66□□□□□ -1.18
SPG21-208ENST00000558943 NEURL1BA8MQ27 555 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 USP17L5A8MUK1 530 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 RGS12O14924 1447 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 ADAM23O75077 832 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 PSME1Q06323 249 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 NCOA4Q13772 614 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 ZNF468Q5VIY5 522 aaPredicted RBP7.65□□□□□ -1.18
SPG21-208ENST00000558943 CASKIN1Q8WXD9 1431 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 LRRC59Q96AG4 307 aaKnown RBP7.65□□□□□ -1.18
SPG21-208ENST00000558943 C19orf44Q9H6X5 657 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 ZNF358Q9NW07 568 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 TMEM2Q9UHN6 1383 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 SETBP1Q9Y6X0 1596 aa7.65□□□□□ -1.18
SPG21-208ENST00000558943 PRDM15P57071 1507 aaPredicted RBP7.64□□□□□ -1.19
SPG21-208ENST00000558943 KRBA1A5PL33 1030 aa7.64□□□□□ -1.19
SPG21-208ENST00000558943 KHNYNO15037 678 aaKnown RBP7.64□□□□□ -1.19
SPG21-208ENST00000558943 EFSO43281 561 aa7.64□□□□□ -1.19
SPG21-208ENST00000558943 COL8A1P27658 744 aa7.64□□□□□ -1.19
SPG21-208ENST00000558943 EPHA4P54764 986 aa7.64□□□□□ -1.19
SPG21-208ENST00000558943 BICDL1Q6ZP65 573 aa7.64□□□□□ -1.19
SPG21-208ENST00000558943 MARK1Q9P0L2 795 aa7.64□□□□□ -1.19
SPG21-208ENST00000558943 CDC42BPAQ5VT25 1732 aa7.64□□□□□ -1.19
SPG21-208ENST00000558943 ZC3H13Q5T200 1668 aaKnown RBP7.63□□□□□ -1.19
SPG21-208ENST00000558943 ERVK-7P63135 1459 aa7.63□□□□□ -1.19
SPG21-208ENST00000558943 NCOA2Q15596 1464 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms