RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ZNF330Q9Y3S2 320 aaPredicted RBP15.48■□□□□ 0.07
HMGB1P8-201ENST00000558211 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
HMGB1P8-201ENST00000558211 COL5A3P25940 1745 aaPredicted RBP15.48■□□□□ 0.07
HMGB1P8-201ENST00000558211 MYH14Q7Z406 1995 aaKnown RBP15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 TCERG1O14776 1098 aaKnown RBP15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 OATP04181 439 aa15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 HDGFL1Q5TGJ6 251 aa15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 METTL3Q86U44 580 aaKnown RBP15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 TRMT2AQ8IZ69 625 aaKnown RBP15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 MRPL50Q8N5N7 158 aaKnown RBP15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 PXYLP1Q8TE99 480 aa15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 CCDC87Q9NVE4 849 aa15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 TFCP2L1Q9NZI6 479 aa15.47■□□□□ 0.07
HMGB1P8-201ENST00000558211 MYL6BP14649 208 aa15.46■□□□□ 0.07
HMGB1P8-201ENST00000558211 HMGB2P26583 209 aaKnown RBP15.46■□□□□ 0.07
HMGB1P8-201ENST00000558211 SLC15A2Q16348 729 aa15.46■□□□□ 0.07
HMGB1P8-201ENST00000558211 INTS5Q6P9B9 1019 aaKnown RBP15.46■□□□□ 0.07
HMGB1P8-201ENST00000558211 ARXQ96QS3 562 aa15.46■□□□□ 0.07
HMGB1P8-201ENST00000558211 ZBTB1Q9Y2K1 713 aa15.46■□□□□ 0.07
HMGB1P8-201ENST00000558211 LAMB4A4D0S4 1761 aa15.46■□□□□ 0.07
HMGB1P8-201ENST00000558211 CNTNAP4Q9C0A0 1308 aa15.45■□□□□ 0.06
HMGB1P8-201ENST00000558211 VAMP4O75379 141 aa15.45■□□□□ 0.06
HMGB1P8-201ENST00000558211 ANXA1P04083 346 aa15.45■□□□□ 0.06
HMGB1P8-201ENST00000558211 RC3H1Q5TC82 1133 aaKnown RBP15.45■□□□□ 0.06
HMGB1P8-201ENST00000558211 KRI1Q8N9T8 703 aaKnown RBP15.45■□□□□ 0.06
HMGB1P8-201ENST00000558211 RBM46Q8TBY0 533 aaKnown RBP15.45■□□□□ 0.06
HMGB1P8-201ENST00000558211 CICQ96RK0 1608 aaPredicted RBP15.44■□□□□ 0.06
HMGB1P8-201ENST00000558211 HOXB7P09629 217 aa15.44■□□□□ 0.06
HMGB1P8-201ENST00000558211 NPM2Q86SE8 214 aaKnown RBP15.44■□□□□ 0.06
HMGB1P8-201ENST00000558211 PHOX2BQ99453 314 aa15.44■□□□□ 0.06
HMGB1P8-201ENST00000558211 RTCBQ9Y3I0 505 aaKnown RBP15.44■□□□□ 0.06
HMGB1P8-201ENST00000558211 RPS6KA4O75676 772 aa15.43■□□□□ 0.06
HMGB1P8-201ENST00000558211 R3HDM1Q15032 1099 aaKnown RBP15.43■□□□□ 0.06
HMGB1P8-201ENST00000558211 CCDC30Q5VVM6 783 aa15.43■□□□□ 0.06
HMGB1P8-201ENST00000558211 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
HMGB1P8-201ENST00000558211 AMIGO3Q86WK7 504 aa15.43■□□□□ 0.06
HMGB1P8-201ENST00000558211 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
HMGB1P8-201ENST00000558211 CHPF2Q9P2E5 772 aa15.43■□□□□ 0.06
HMGB1P8-201ENST00000558211 PROSER3Q2NL68 480 aa15.42■□□□□ 0.06
HMGB1P8-201ENST00000558211 SLC24A3Q9HC58 644 aa15.42■□□□□ 0.06
HMGB1P8-201ENST00000558211 TUBGCP6Q96RT7 1819 aa15.42■□□□□ 0.06
HMGB1P8-201ENST00000558211 UBR3Q6ZT12 1888 aa15.42■□□□□ 0.06
HMGB1P8-201ENST00000558211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.41■□□□□ 0.06
HMGB1P8-201ENST00000558211 TRAPPC3LQ5T215 181 aa15.41■□□□□ 0.06
HMGB1P8-201ENST00000558211 STK31Q9BXU1 1019 aa15.41■□□□□ 0.06
HMGB1P8-201ENST00000558211 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
HMGB1P8-201ENST00000558211 IL6STP40189 918 aaPredicted RBP15.4■□□□□ 0.06
HMGB1P8-201ENST00000558211 AIMP1Q12904 312 aaKnown RBP15.4■□□□□ 0.06
HMGB1P8-201ENST00000558211 COL23A1Q86Y22 540 aaPredicted RBP15.4■□□□□ 0.06
HMGB1P8-201ENST00000558211 ZFRQ96KR1 1074 aaKnown RBP15.4■□□□□ 0.06
HMGB1P8-201ENST00000558211 CHMP4AQ9BY43 222 aa15.4■□□□□ 0.06
HMGB1P8-201ENST00000558211 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
HMGB1P8-201ENST00000558211 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
HMGB1P8-201ENST00000558211 PNPLA7Q6ZV29 1317 aa15.4■□□□□ 0.06
HMGB1P8-201ENST00000558211 RCCD1A6NED2 376 aa15.39■□□□□ 0.05
HMGB1P8-201ENST00000558211 SSFA2P28290 1259 aa15.39■□□□□ 0.05
HMGB1P8-201ENST00000558211 RFC4P35249 363 aa15.39■□□□□ 0.05
HMGB1P8-201ENST00000558211 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
HMGB1P8-201ENST00000558211 BCL2L13Q9BXK5 485 aa15.39■□□□□ 0.05
HMGB1P8-201ENST00000558211 PDGFDQ9GZP0 370 aaPredicted RBP15.39■□□□□ 0.05
HMGB1P8-201ENST00000558211 TBC1D2BQ9UPU7 963 aa15.39■□□□□ 0.05
HMGB1P8-201ENST00000558211 ERBB4Q15303 1308 aa15.39■□□□□ 0.05
HMGB1P8-201ENST00000558211 COL15A1P39059 1388 aa15.38■□□□□ 0.05
HMGB1P8-201ENST00000558211 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
HMGB1P8-201ENST00000558211 A0A087WZG4 1122 aa15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 DNAJB2P25686 324 aa15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 TTLL7Q6ZT98 887 aa15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 COPS6Q7L5N1 327 aa15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 DZIP3Q86Y13 1208 aaKnown RBP15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 FLAD1Q8NFF5 587 aa15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 XAGE3Q8WTP9 111 aa15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 SRP68Q9UHB9 627 aaKnown RBP15.37■□□□□ 0.05
HMGB1P8-201ENST00000558211 ZPR1O75312 459 aa15.36■□□□□ 0.05
HMGB1P8-201ENST00000558211 TMEM132AQ24JP5 1023 aa15.36■□□□□ 0.05
HMGB1P8-201ENST00000558211 G2E3Q7L622 706 aa15.36■□□□□ 0.05
HMGB1P8-201ENST00000558211 SSH1Q8WYL5 1049 aa15.36■□□□□ 0.05
HMGB1P8-201ENST00000558211 TMEM134Q9H6X4 195 aa15.36■□□□□ 0.05
HMGB1P8-201ENST00000558211 SMC4Q9NTJ3 1288 aa15.36■□□□□ 0.05
HMGB1P8-201ENST00000558211 TRIM66O15016 1216 aa15.35■□□□□ 0.05
HMGB1P8-201ENST00000558211 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
HMGB1P8-201ENST00000558211 USPL1Q5W0Q7 1092 aa15.35■□□□□ 0.05
HMGB1P8-201ENST00000558211 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
HMGB1P8-201ENST00000558211 LRP10Q7Z4F1 713 aa15.35■□□□□ 0.05
HMGB1P8-201ENST00000558211 ZBTB3Q9H5J0 574 aa15.35■□□□□ 0.05
HMGB1P8-201ENST00000558211 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
HMGB1P8-201ENST00000558211 RARSP54136 660 aaKnown RBP15.34■□□□□ 0.05
HMGB1P8-201ENST00000558211 MSL1Q68DK7 614 aa15.34■□□□□ 0.05
HMGB1P8-201ENST00000558211 NARFQ9UHQ1 456 aa15.34■□□□□ 0.05
HMGB1P8-201ENST00000558211 CACNA1FO60840 1977 aa15.34■□□□□ 0.05
HMGB1P8-201ENST00000558211 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
HMGB1P8-201ENST00000558211 ZBTB7AO95365 584 aa15.33■□□□□ 0.04
HMGB1P8-201ENST00000558211 ALDH1L2Q3SY69 923 aa15.33■□□□□ 0.04
HMGB1P8-201ENST00000558211 ZNF428Q96B54 188 aa15.33■□□□□ 0.04
HMGB1P8-201ENST00000558211 GOLGA8CPA6NN73 597 aa15.32■□□□□ 0.04
HMGB1P8-201ENST00000558211 BCAR3O75815 825 aa15.32■□□□□ 0.04
HMGB1P8-201ENST00000558211 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
HMGB1P8-201ENST00000558211 FLIIQ13045 1269 aa15.32■□□□□ 0.04
HMGB1P8-201ENST00000558211 FKBP5Q13451 457 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms